RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 MFSD10Q14728 455 aa8.68□□□□□ -1.02
SKP1-212ENST00000523966 BOLA1Q9Y3E2 137 aa8.68□□□□□ -1.02
SKP1-212ENST00000523966 MICALL2Q8IY33 904 aa8.67□□□□□ -1.02
SKP1-212ENST00000523966 SLC39A7Q92504 469 aa8.67□□□□□ -1.02
SKP1-212ENST00000523966 PDCD7Q8N8D1 485 aaKnown RBP8.66□□□□□ -1.02
SKP1-212ENST00000523966 GPHNQ9NQX3 736 aaPredicted RBP8.66□□□□□ -1.02
SKP1-212ENST00000523966 C7P10643 843 aa8.64□□□□□ -1.03
SKP1-212ENST00000523966 PPP1R15BQ5SWA1 713 aa8.64□□□□□ -1.03
SKP1-212ENST00000523966 SMYD5Q6GMV2 418 aa8.62□□□□□ -1.03
SKP1-212ENST00000523966 SP7Q8TDD2 431 aaPredicted RBP8.6□□□□□ -1.03
SKP1-212ENST00000523966 TMEM121BQ9BXQ6 578 aaPredicted RBP8.6□□□□□ -1.03
SKP1-212ENST00000523966 CAMK2BQ13554 666 aa8.59□□□□□ -1.03
SKP1-212ENST00000523966 PELP1Q8IZL8 1130 aaKnown RBP8.59□□□□□ -1.03
SKP1-212ENST00000523966 METRNQ9UJH8 293 aa8.58□□□□□ -1.04
SKP1-212ENST00000523966 SEMA3EO15041 775 aa8.57□□□□□ -1.04
SKP1-212ENST00000523966 FOXK1P85037 733 aa8.57□□□□□ -1.04
SKP1-212ENST00000523966 DSG2Q14126 1118 aa8.57□□□□□ -1.04
SKP1-212ENST00000523966 LMOD2Q6P5Q4 547 aa8.57□□□□□ -1.04
SKP1-212ENST00000523966 COLQQ9Y215 455 aaPredicted RBP8.57□□□□□ -1.04
SKP1-212ENST00000523966 ARIH1Q9Y4X5 557 aaPredicted RBP8.57□□□□□ -1.04
SKP1-212ENST00000523966 C2orf72A6NCS6 295 aa8.56□□□□□ -1.04
SKP1-212ENST00000523966 C3orf67Q6ZVT6 689 aa8.56□□□□□ -1.04
SKP1-212ENST00000523966 PLPP6Q8IY26 295 aa8.56□□□□□ -1.04
SKP1-212ENST00000523966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.55□□□□□ -1.04
SKP1-212ENST00000523966 TESPA1A2RU30 521 aaPredicted RBP8.54□□□□□ -1.04
SKP1-212ENST00000523966 SPDYE16A6NNV3 312 aaPredicted RBP8.53□□□□□ -1.04
SKP1-212ENST00000523966 MAP3K9P80192 1104 aa8.53□□□□□ -1.04
SKP1-212ENST00000523966 DPYSL4O14531 572 aa8.52□□□□□ -1.05
SKP1-212ENST00000523966 KIF3CO14782 793 aa8.5□□□□□ -1.05
SKP1-212ENST00000523966 POTEIP0CG38 1075 aa8.49□□□□□ -1.05
SKP1-212ENST00000523966 EMILIN3Q9NT22 766 aa8.49□□□□□ -1.05
SKP1-212ENST00000523966 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.49□□□□□ -1.05
SKP1-212ENST00000523966 TBC1D12O60347 775 aa8.48□□□□□ -1.05
SKP1-212ENST00000523966 POTEFA5A3E0 1075 aa8.47□□□□□ -1.05
SKP1-212ENST00000523966 ZNF316A6NFI3 1004 aaPredicted RBP8.47□□□□□ -1.05
SKP1-212ENST00000523966 UPF1Q92900 1129 aaKnown RBP eCLIP8.47□□□□□ -1.05
SKP1-212ENST00000523966 PDIA6Q15084 440 aa8.45□□□□□ -1.06
SKP1-212ENST00000523966 TMEM92Q6UXU6 159 aa8.45□□□□□ -1.06
SKP1-212ENST00000523966 ZC3H15Q8WU90 426 aaKnown RBP8.43□□□□□ -1.06
SKP1-212ENST00000523966 MLLT3P42568 568 aaPredicted RBP8.42□□□□□ -1.06
SKP1-212ENST00000523966 GRXCR2A6NFK2 248 aa8.41□□□□□ -1.06
SKP1-212ENST00000523966 OXER1Q8TDS5 423 aa8.41□□□□□ -1.06
SKP1-212ENST00000523966 GPIHBP1Q8IV16 184 aa8.4□□□□□ -1.06
SKP1-212ENST00000523966 RBM26Q5T8P6 1007 aaKnown RBP8.39□□□□□ -1.07
SKP1-212ENST00000523966 EVI5O60447 810 aa8.38□□□□□ -1.07
SKP1-212ENST00000523966 KRI1Q8N9T8 703 aaKnown RBP8.38□□□□□ -1.07
SKP1-212ENST00000523966 PTCD2Q8WV60 388 aaKnown RBP8.37□□□□□ -1.07
SKP1-212ENST00000523966 SLC34A2O95436 690 aa8.36□□□□□ -1.07
SKP1-212ENST00000523966 MAMSTRQ6ZN01 415 aa8.36□□□□□ -1.07
SKP1-212ENST00000523966 SCUBE2Q9NQ36 999 aa8.36□□□□□ -1.07
SKP1-212ENST00000523966 NUTM2FA1L443 756 aa8.35□□□□□ -1.07
SKP1-212ENST00000523966 DDX12PQ92771 950 aa8.35□□□□□ -1.07
SKP1-212ENST00000523966 ZMYND10O75800 440 aa8.34□□□□□ -1.07
SKP1-212ENST00000523966 PTGER2P43116 358 aa8.33□□□□□ -1.08
SKP1-212ENST00000523966 SLC24A3Q9HC58 644 aa8.33□□□□□ -1.08
SKP1-212ENST00000523966 RIMBP2O15034 1052 aa8.32□□□□□ -1.08
SKP1-212ENST00000523966 BARGINQ6ZT62 677 aa8.32□□□□□ -1.08
SKP1-212ENST00000523966 SLAIN1Q8ND83 568 aa8.32□□□□□ -1.08
SKP1-212ENST00000523966 PLSCR2Q9NRY7 297 aa8.32□□□□□ -1.08
SKP1-212ENST00000523966 DOK7Q18PE1 504 aa8.31□□□□□ -1.08
SKP1-212ENST00000523966 PCDHGA4Q9Y5G9 962 aa8.31□□□□□ -1.08
SKP1-212ENST00000523966 OSBPP22059 807 aa8.29□□□□□ -1.08
SKP1-212ENST00000523966 AK7Q96M32 723 aa8.29□□□□□ -1.08
SKP1-212ENST00000523966 ANO8Q9HCE9 1232 aaPredicted RBP8.29□□□□□ -1.08
SKP1-212ENST00000523966 ZNF710Q8N1W2 664 aa8.28□□□□□ -1.08
SKP1-212ENST00000523966 EPAS1Q99814 870 aa8.28□□□□□ -1.08
SKP1-212ENST00000523966 FCHSD2O94868 740 aa8.27□□□□□ -1.09
SKP1-212ENST00000523966 PHF14O94880 888 aa8.27□□□□□ -1.09
SKP1-212ENST00000523966 NEUROD2Q15784 382 aa8.27□□□□□ -1.09
SKP1-212ENST00000523966 SNPHO15079 494 aa8.25□□□□□ -1.09
SKP1-212ENST00000523966 MAP3K7O43318 606 aa8.25□□□□□ -1.09
SKP1-212ENST00000523966 GNPATO15228 680 aa8.24□□□□□ -1.09
SKP1-212ENST00000523966 HIC1Q14526 733 aa8.24□□□□□ -1.09
SKP1-212ENST00000523966 TYW1BQ6NUM6 668 aa8.24□□□□□ -1.09
SKP1-212ENST00000523966 ZSWIM6Q9HCJ5 1215 aa8.24□□□□□ -1.09
SKP1-212ENST00000523966 POTEB2H3BUK9 544 aa8.23□□□□□ -1.09
SKP1-212ENST00000523966 POTEJP0CG39 1038 aa8.23□□□□□ -1.09
SKP1-212ENST00000523966 FBXW7Q969H0 707 aa8.23□□□□□ -1.09
SKP1-212ENST00000523966 RBM33Q96EV2 1170 aaKnown RBP8.23□□□□□ -1.09
SKP1-212ENST00000523966 TMEM132AQ24JP5 1023 aa8.22□□□□□ -1.09
SKP1-212ENST00000523966 ARSIQ5FYB1 569 aa8.22□□□□□ -1.09
SKP1-212ENST00000523966 MINK1Q8N4C8 1332 aaPredicted RBP8.22□□□□□ -1.09
SKP1-212ENST00000523966 NUDT7P0C024 238 aa8.21□□□□□ -1.1
SKP1-212ENST00000523966 BRPF1P55201 1214 aaPredicted RBP8.21□□□□□ -1.1
SKP1-212ENST00000523966 EN1Q05925 392 aaPredicted RBP8.21□□□□□ -1.1
SKP1-212ENST00000523966 JPH4Q96JJ6 628 aa8.21□□□□□ -1.1
SKP1-212ENST00000523966 MAP2K5Q13163 448 aa8.2□□□□□ -1.1
SKP1-212ENST00000523966 ZNF454Q8N9F8 522 aa8.2□□□□□ -1.1
SKP1-212ENST00000523966 DAXXQ9UER7 740 aaPredicted RBP8.2□□□□□ -1.1
SKP1-212ENST00000523966 PCDHGA10Q9Y5H3 936 aa8.2□□□□□ -1.1
SKP1-212ENST00000523966 IRF6O14896 467 aa8.18□□□□□ -1.1
SKP1-212ENST00000523966 GPR37O15354 613 aa8.18□□□□□ -1.1
SKP1-212ENST00000523966 HOXB3P14651 431 aaPredicted RBP8.18□□□□□ -1.1
SKP1-212ENST00000523966 PTGDRQ13258 359 aa8.18□□□□□ -1.1
SKP1-212ENST00000523966 ZDHHC16Q969W1 377 aa8.18□□□□□ -1.1
SKP1-212ENST00000523966 PSDA5PKW4 1024 aaPredicted RBP8.17□□□□□ -1.1
SKP1-212ENST00000523966 TRIM66O15016 1216 aa8.17□□□□□ -1.1
SKP1-212ENST00000523966 FOSBP53539 338 aa8.17□□□□□ -1.1
SKP1-212ENST00000523966 KHSRPQ92945 711 aaKnown RBP eCLIP8.17□□□□□ -1.12e-7■■■□□ 16.3
SKP1-212ENST00000523966 PRIM1P49642 420 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms