RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 SCAPERQ9BY12 1400 aa13.27□□□□□ -0.29
NSMCE2-213ENST00000523824 ZMYM4Q5VZL5 1548 aa13.26□□□□□ -0.29
NSMCE2-213ENST00000523824 TTC37Q6PGP7 1564 aa13.25□□□□□ -0.29
NSMCE2-213ENST00000523824 HECW1Q76N89 1606 aa13.24□□□□□ -0.29
NSMCE2-213ENST00000523824 PLCH2O75038 1416 aa13.24□□□□□ -0.29
NSMCE2-213ENST00000523824 EFCAB2Q5VUJ9 269 aa13.24□□□□□ -0.29
NSMCE2-213ENST00000523824 CDK13Q14004 1512 aaKnown RBP13.23□□□□□ -0.29
NSMCE2-213ENST00000523824 ATP10AO60312 1499 aa13.23□□□□□ -0.29
NSMCE2-213ENST00000523824 CEBPAP49715 358 aaPredicted RBP13.22□□□□□ -0.29
NSMCE2-213ENST00000523824 MYT1LQ9UL68 1186 aa13.22□□□□□ -0.29
NSMCE2-213ENST00000523824 CDK11AQ9UQ88 783 aaPredicted RBP13.22□□□□□ -0.29
NSMCE2-213ENST00000523824 SIGLEC1Q9BZZ2 1709 aa13.22□□□□□ -0.29
NSMCE2-213ENST00000523824 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.29
NSMCE2-213ENST00000523824 DMRT2Q9Y5R5 561 aa13.21□□□□□ -0.29
NSMCE2-213ENST00000523824 UBTFP17480 764 aaKnown RBP13.2□□□□□ -0.3
NSMCE2-213ENST00000523824 C9orf84Q5VXU9 1444 aa13.2□□□□□ -0.3
NSMCE2-213ENST00000523824 FER1L4A9Z1Z3 1794 aa13.2□□□□□ -0.3
NSMCE2-213ENST00000523824 ARHGEF12Q9NZN5 1544 aa13.18□□□□□ -0.3
NSMCE2-213ENST00000523824 AFAP1Q8N556 730 aa13.17□□□□□ -0.3
NSMCE2-213ENST00000523824 FMN1Q68DA7 1419 aa13.16□□□□□ -0.3
NSMCE2-213ENST00000523824 ESF1Q9H501 851 aaKnown RBP13.15□□□□□ -0.3
NSMCE2-213ENST00000523824 ZNF518AQ6AHZ1 1483 aa13.15□□□□□ -0.3
NSMCE2-213ENST00000523824 UHRF1BP1Q6BDS2 1440 aa13.14□□□□□ -0.31
NSMCE2-213ENST00000523824 PREX1Q8TCU6 1659 aa13.14□□□□□ -0.31
NSMCE2-213ENST00000523824 DISP3Q9P2K9 1392 aa13.13□□□□□ -0.31
NSMCE2-213ENST00000523824 MYO5CQ9NQX4 1742 aa13.13□□□□□ -0.31
NSMCE2-213ENST00000523824 ARHGAP5Q13017 1502 aa13.13□□□□□ -0.31
NSMCE2-213ENST00000523824 CLIP1P30622 1438 aa13.12□□□□□ -0.31
NSMCE2-213ENST00000523824 TROQ12816 1431 aaPredicted RBP13.12□□□□□ -0.31
NSMCE2-213ENST00000523824 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
NSMCE2-213ENST00000523824 KIF14Q15058 1648 aa13.1□□□□□ -0.31
NSMCE2-213ENST00000523824 ILDR2Q71H61 639 aa13.09□□□□□ -0.31
NSMCE2-213ENST00000523824 KDM5CP41229 1560 aa13.08□□□□□ -0.32
NSMCE2-213ENST00000523824 STRCQ7RTU9 1775 aa13.07□□□□□ -0.32
NSMCE2-213ENST00000523824 PTPRTO14522 1441 aa13.07□□□□□ -0.32
NSMCE2-213ENST00000523824 MLH3Q9UHC1 1453 aa13.07□□□□□ -0.32
NSMCE2-213ENST00000523824 SETD1BQ9UPS6 1966 aaKnown RBP13.07□□□□□ -0.32
NSMCE2-213ENST00000523824 DIP2CQ9Y2E4 1556 aa13.07□□□□□ -0.32
NSMCE2-213ENST00000523824 SOCS7O14512 581 aa13.06□□□□□ -0.32
NSMCE2-213ENST00000523824 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
NSMCE2-213ENST00000523824 PPP6R1Q9UPN7 881 aa13.05□□□□□ -0.32
NSMCE2-213ENST00000523824 REREQ9P2R6 1566 aa13.05□□□□□ -0.32
NSMCE2-213ENST00000523824 ADRA2BP18089 450 aa13.04□□□□□ -0.32
NSMCE2-213ENST00000523824 AGLP35573 1532 aa13.03□□□□□ -0.32
NSMCE2-213ENST00000523824 ABCA6Q8N139 1617 aa13.02□□□□□ -0.32
NSMCE2-213ENST00000523824 C3P01024 1663 aa13.02□□□□□ -0.32
NSMCE2-213ENST00000523824 ZNF777Q9ULD5 760 aaPredicted RBP13.02□□□□□ -0.33
NSMCE2-213ENST00000523824 CNTLNQ9NXG0 1405 aa13.02□□□□□ -0.33
NSMCE2-213ENST00000523824 CDC42BPBQ9Y5S2 1711 aa13.02□□□□□ -0.33
NSMCE2-213ENST00000523824 ABCC1P33527 1531 aa13□□□□□ -0.33
NSMCE2-213ENST00000523824 CCDC18Q5T9S5 1454 aa12.99□□□□□ -0.33
NSMCE2-213ENST00000523824 NCOA1Q15788 1441 aa12.99□□□□□ -0.33
NSMCE2-213ENST00000523824 PREX2Q70Z35 1606 aa12.99□□□□□ -0.33
NSMCE2-213ENST00000523824 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
NSMCE2-213ENST00000523824 ZMYM3Q14202 1370 aa12.98□□□□□ -0.33
NSMCE2-213ENST00000523824 SPAG9O60271 1321 aaKnown RBP12.98□□□□□ -0.33
NSMCE2-213ENST00000523824 LRRIQ1Q96JM4 1722 aa12.98□□□□□ -0.33
NSMCE2-213ENST00000523824 LTBP4Q8N2S1 1624 aa12.98□□□□□ -0.33
NSMCE2-213ENST00000523824 IQSEC2Q5JU85 1478 aa12.97□□□□□ -0.33
NSMCE2-213ENST00000523824 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
NSMCE2-213ENST00000523824 ITSN2Q9NZM3 1697 aa12.97□□□□□ -0.33
NSMCE2-213ENST00000523824 HNRNPMP52272 730 aaKnown RBP eCLIP12.97□□□□□ -0.33
NSMCE2-213ENST00000523824 NPATQ14207 1427 aa12.96□□□□□ -0.33
NSMCE2-213ENST00000523824 SPATA31D1Q6ZQQ2 1576 aa12.96□□□□□ -0.33
NSMCE2-213ENST00000523824 PIAS4Q8N2W9 510 aaPredicted RBP12.96□□□□□ -0.33
NSMCE2-213ENST00000523824 KIDINS220Q9ULH0 1771 aa12.96□□□□□ -0.34
NSMCE2-213ENST00000523824 UBAP1LF5GYI3 381 aa12.95□□□□□ -0.34
NSMCE2-213ENST00000523824 CAMSAP1Q5T5Y3 1602 aa12.95□□□□□ -0.34
NSMCE2-213ENST00000523824 SAMD9LQ8IVG5 1584 aa12.94□□□□□ -0.34
NSMCE2-213ENST00000523824 ZNF335Q9H4Z2 1342 aaPredicted RBP12.93□□□□□ -0.34
NSMCE2-213ENST00000523824 PKD2Q13563 968 aa12.93□□□□□ -0.34
NSMCE2-213ENST00000523824 GGT6Q6P531 493 aa12.93□□□□□ -0.34
NSMCE2-213ENST00000523824 CFDP1Q9UEE9 299 aaPredicted RBP12.93□□□□□ -0.34
NSMCE2-213ENST00000523824 CDC42BPAQ5VT25 1732 aa12.92□□□□□ -0.34
NSMCE2-213ENST00000523824 GPATCH8Q9UKJ3 1502 aaKnown RBP12.92□□□□□ -0.34
NSMCE2-213ENST00000523824 MROH2AA6NES4 1674 aa12.91□□□□□ -0.34
NSMCE2-213ENST00000523824 SYCP2Q9BX26 1530 aa12.91□□□□□ -0.34
NSMCE2-213ENST00000523824 SUPT6HQ7KZ85 1726 aaKnown RBP12.9□□□□□ -0.34
NSMCE2-213ENST00000523824 A2MP01023 1474 aa12.9□□□□□ -0.34
NSMCE2-213ENST00000523824 FYCO1Q9BQS8 1478 aa12.9□□□□□ -0.34
NSMCE2-213ENST00000523824 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
NSMCE2-213ENST00000523824 CCNB3Q8WWL7 1395 aa12.89□□□□□ -0.35
NSMCE2-213ENST00000523824 PLEKHH2Q8IVE3 1493 aa12.89□□□□□ -0.35
NSMCE2-213ENST00000523824 PTPRKQ15262 1439 aa12.88□□□□□ -0.35
NSMCE2-213ENST00000523824 ATP7AQ04656 1500 aa12.88□□□□□ -0.35
NSMCE2-213ENST00000523824 CLTCQ00610 1675 aaKnown RBP12.87□□□□□ -0.35
NSMCE2-213ENST00000523824 PLA2R1Q13018 1463 aa12.87□□□□□ -0.35
NSMCE2-213ENST00000523824 MSH5O43196 834 aa12.86□□□□□ -0.35
NSMCE2-213ENST00000523824 SCAF1Q9H7N4 1312 aaKnown RBP12.86□□□□□ -0.35
NSMCE2-213ENST00000523824 CEP170BQ9Y4F5 1589 aaPredicted RBP12.86□□□□□ -0.35
NSMCE2-213ENST00000523824 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
NSMCE2-213ENST00000523824 MTUS2Q5JR59 1369 aa12.85□□□□□ -0.35
NSMCE2-213ENST00000523824 PLXNC1O60486 1568 aa12.85□□□□□ -0.35
NSMCE2-213ENST00000523824 MYO3AQ8NEV4 1616 aa12.84□□□□□ -0.35
NSMCE2-213ENST00000523824 ZNF644Q9H582 1327 aaPredicted RBP12.84□□□□□ -0.35
NSMCE2-213ENST00000523824 INO80Q9ULG1 1556 aaPredicted RBP12.83□□□□□ -0.36
NSMCE2-213ENST00000523824 PIP4K2BP78356 416 aa12.83□□□□□ -0.36
NSMCE2-213ENST00000523824 ZNF142P52746 1687 aaPredicted RBP12.83□□□□□ -0.36
NSMCE2-213ENST00000523824 TOM1O60784 492 aa12.82□□□□□ -0.36
NSMCE2-213ENST00000523824 A2ML1A8K2U0 1454 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms