RNA–Protein interactions for RNA: ENST00000523200.5

TNIP1-217, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene TNIP1, Length 1,743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-217ENST00000523200 ZNF777Q9ULD5 760 aaPredicted RBP23.29■■□□□ 1.32
TNIP1-217ENST00000523200 CHIC2Q9UKJ5 165 aa23.28■■□□□ 1.32
TNIP1-217ENST00000523200 ABCC5O15440 1437 aa23.27■■□□□ 1.32
TNIP1-217ENST00000523200 ROCK1Q13464 1354 aa23.25■■□□□ 1.31
TNIP1-217ENST00000523200 RRP7BPQ9NSQ0 103 aa23.24■■□□□ 1.31
TNIP1-217ENST00000523200 KCNH8Q96L42 1107 aa23.22■■□□□ 1.31
TNIP1-217ENST00000523200 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.22■■□□□ 1.31
TNIP1-217ENST00000523200 GCC2Q8IWJ2 1684 aa23.21■■□□□ 1.31
TNIP1-217ENST00000523200 PREX2Q70Z35 1606 aa23.2■■□□□ 1.3
TNIP1-217ENST00000523200 ACIN1Q9UKV3 1341 aaKnown RBP23.19■■□□□ 1.3
TNIP1-217ENST00000523200 TTC37Q6PGP7 1564 aa23.19■■□□□ 1.3
TNIP1-217ENST00000523200 CDC42BPBQ9Y5S2 1711 aa23.16■■□□□ 1.3
TNIP1-217ENST00000523200 NPM1P06748 294 aaKnown RBP eCLIP23.16■■□□□ 1.3
TNIP1-217ENST00000523200 WDR7Q9Y4E6 1490 aa23.15■■□□□ 1.3
TNIP1-217ENST00000523200 RSPH4AQ5TD94 716 aa23.15■■□□□ 1.3
TNIP1-217ENST00000523200 MAPKBP1O60336 1514 aa23.14■■□□□ 1.3
TNIP1-217ENST00000523200 MYO5CQ9NQX4 1742 aa23.14■■□□□ 1.3
TNIP1-217ENST00000523200 ARHGAP5Q13017 1502 aa23.14■■□□□ 1.29
TNIP1-217ENST00000523200 CROCC2H7BZ55 1655 aa23.12■■□□□ 1.29
TNIP1-217ENST00000523200 TSPY4P0CV99 314 aa23.12■■□□□ 1.29
TNIP1-217ENST00000523200 TSPY10P0CW01 314 aa23.12■■□□□ 1.29
TNIP1-217ENST00000523200 ADGRL2O95490 1459 aa23.12■■□□□ 1.29
TNIP1-217ENST00000523200 SHANK2Q9UPX8 1470 aa23.12■■□□□ 1.29
TNIP1-217ENST00000523200 ARHGEF5Q12774 1597 aa23.11■■□□□ 1.29
TNIP1-217ENST00000523200 PLCH2O75038 1416 aa23.11■■□□□ 1.29
TNIP1-217ENST00000523200 SAMD9LQ8IVG5 1584 aa23.11■■□□□ 1.29
TNIP1-217ENST00000523200 NCOA1Q15788 1441 aa23.11■■□□□ 1.29
TNIP1-217ENST00000523200 ANKRD30AQ9BXX3 1397 aa23.1■■□□□ 1.29
TNIP1-217ENST00000523200 ADGBQ8N7X0 1667 aa23.1■■□□□ 1.29
TNIP1-217ENST00000523200 PLEKHH2Q8IVE3 1493 aa23.1■■□□□ 1.29
TNIP1-217ENST00000523200 HNRNPMP52272 730 aaKnown RBP eCLIP23.09■■□□□ 1.29
TNIP1-217ENST00000523200 MBD5Q9P267 1494 aa23.09■■□□□ 1.29
TNIP1-217ENST00000523200 ASXL2Q76L83 1435 aa23.08■■□□□ 1.29
TNIP1-217ENST00000523200 EFCAB2Q5VUJ9 269 aa23.08■■□□□ 1.28
TNIP1-217ENST00000523200 C9orf84Q5VXU9 1444 aa23.07■■□□□ 1.28
TNIP1-217ENST00000523200 KIAA1107Q9UPP5 1409 aa23.07■■□□□ 1.28
TNIP1-217ENST00000523200 CCDC141Q6ZP82 1450 aa23.06■■□□□ 1.28
TNIP1-217ENST00000523200 TRIM52Q96A61 297 aa23.05■■□□□ 1.28
TNIP1-217ENST00000523200 ARAP3Q8WWN8 1544 aa23.04■■□□□ 1.28
TNIP1-217ENST00000523200 KDM6BO15054 1643 aa23.04■■□□□ 1.28
TNIP1-217ENST00000523200 SYCP2Q9BX26 1530 aa23.02■■□□□ 1.28
TNIP1-217ENST00000523200 ABCA9Q8IUA7 1624 aa23■■□□□ 1.27
TNIP1-217ENST00000523200 TIMELESSQ9UNS1 1208 aa22.98■■□□□ 1.27
TNIP1-217ENST00000523200 ANKRD50Q9ULJ7 1429 aa22.97■■□□□ 1.27
TNIP1-217ENST00000523200 SIN3AQ96ST3 1273 aa22.96■■□□□ 1.27
TNIP1-217ENST00000523200 MPHOSPH9Q99550 1183 aa22.96■■□□□ 1.27
TNIP1-217ENST00000523200 RIMBP3CA6NJZ7 1639 aa22.95■■□□□ 1.26
TNIP1-217ENST00000523200 RIMBP3BA6NNM3 1639 aa22.95■■□□□ 1.26
TNIP1-217ENST00000523200 RIMBP3Q9UFD9 1639 aa22.95■■□□□ 1.26
TNIP1-217ENST00000523200 MAST1Q9Y2H9 1570 aa22.95■■□□□ 1.26
TNIP1-217ENST00000523200 NEUROD1Q13562 356 aa22.94■■□□□ 1.26
TNIP1-217ENST00000523200 CYB5RLQ6IPT4 315 aa22.94■■□□□ 1.26
TNIP1-217ENST00000523200 KIF15Q9NS87 1388 aa22.94■■□□□ 1.26
TNIP1-217ENST00000523200 ABCC1P33527 1531 aa22.94■■□□□ 1.26
TNIP1-217ENST00000523200 ARHGEF12Q9NZN5 1544 aa22.92■■□□□ 1.26
TNIP1-217ENST00000523200 FANCAO15360 1455 aa22.9■■□□□ 1.26
TNIP1-217ENST00000523200 SLC4A1APQ9BWU0 796 aaKnown RBP22.88■■□□□ 1.25
TNIP1-217ENST00000523200 DENND4BO75064 1496 aaPredicted RBP22.87■■□□□ 1.25
TNIP1-217ENST00000523200 ZNF316A6NFI3 1004 aaPredicted RBP22.86■■□□□ 1.25
TNIP1-217ENST00000523200 PLXNC1O60486 1568 aa22.85■■□□□ 1.25
TNIP1-217ENST00000523200 TRAPPC8Q9Y2L5 1435 aa22.85■■□□□ 1.25
TNIP1-217ENST00000523200 CD109Q6YHK3 1445 aa22.84■■□□□ 1.25
TNIP1-217ENST00000523200 TONSLQ96HA7 1378 aa22.82■■□□□ 1.24
TNIP1-217ENST00000523200 PZPP20742 1482 aa22.82■■□□□ 1.24
TNIP1-217ENST00000523200 RTEL1-TNFRSF6BF6WH68 1400 aa22.82■■□□□ 1.24
TNIP1-217ENST00000523200 ADGRL1O94910 1474 aa22.82■■□□□ 1.24
TNIP1-217ENST00000523200 SPAG9O60271 1321 aaKnown RBP22.81■■□□□ 1.24
TNIP1-217ENST00000523200 SCAPERQ9BY12 1400 aa22.8■■□□□ 1.24
TNIP1-217ENST00000523200 NUP155O75694 1391 aa22.8■■□□□ 1.24
TNIP1-217ENST00000523200 DUOX2Q9NRD8 1548 aa22.79■■□□□ 1.24
TNIP1-217ENST00000523200 AFAP1Q8N556 730 aa22.79■■□□□ 1.24
TNIP1-217ENST00000523200 CFAP74Q9C0B2 1584 aa22.78■■□□□ 1.24
TNIP1-217ENST00000523200 KDM5DQ9BY66 1539 aa22.78■■□□□ 1.24
TNIP1-217ENST00000523200 ANKRD30BQ9BXX2 1392 aa22.78■■□□□ 1.24
TNIP1-217ENST00000523200 PPP1R15AO75807 674 aaPredicted RBP22.76■■□□□ 1.23
TNIP1-217ENST00000523200 FOXD1Q16676 465 aa22.76■■□□□ 1.23
TNIP1-217ENST00000523200 ERBINQ96RT1 1412 aa22.75■■□□□ 1.23
TNIP1-217ENST00000523200 ZFYVE16Q7Z3T8 1539 aa22.73■■□□□ 1.23
TNIP1-217ENST00000523200 PKD2Q13563 968 aa22.73■■□□□ 1.23
TNIP1-217ENST00000523200 GLI2P10070 1586 aa22.7■■□□□ 1.22
TNIP1-217ENST00000523200 ZNF518AQ6AHZ1 1483 aa22.69■■□□□ 1.22
TNIP1-217ENST00000523200 NEO1Q92859 1461 aa22.69■■□□□ 1.22
TNIP1-217ENST00000523200 ATP7AQ04656 1500 aa22.69■■□□□ 1.22
TNIP1-217ENST00000523200 MYT1LQ9UL68 1186 aa22.68■■□□□ 1.22
TNIP1-217ENST00000523200 UNC13BO14795 1591 aa22.68■■□□□ 1.22
TNIP1-217ENST00000523200 INO80Q9ULG1 1556 aaPredicted RBP22.68■■□□□ 1.22
TNIP1-217ENST00000523200 RPRD2Q5VT52 1461 aaKnown RBP22.67■■□□□ 1.22
TNIP1-217ENST00000523200 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
TNIP1-217ENST00000523200 FAM135AQ9P2D6 1515 aa22.66■■□□□ 1.22
TNIP1-217ENST00000523200 MAP3K4Q9Y6R4 1608 aa22.65■■□□□ 1.22
TNIP1-217ENST00000523200 POGZQ7Z3K3 1410 aa22.64■■□□□ 1.21
TNIP1-217ENST00000523200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.63■■□□□ 1.212e-6■■■□□ 16.1
TNIP1-217ENST00000523200 FAM69CQ0P6D2 419 aa22.62■■□□□ 1.21
TNIP1-217ENST00000523200 MAGI2Q86UL8 1455 aa22.62■■□□□ 1.21
TNIP1-217ENST00000523200 IQGAP3Q86VI3 1631 aa22.6■■□□□ 1.21
TNIP1-217ENST00000523200 KDM5CP41229 1560 aa22.59■■□□□ 1.21
TNIP1-217ENST00000523200 DIP2BQ9P265 1576 aa22.59■■□□□ 1.21
TNIP1-217ENST00000523200 DHX29Q7Z478 1369 aaKnown RBP22.59■■□□□ 1.21
TNIP1-217ENST00000523200 L3MBTL2Q969R5 705 aa22.59■■□□□ 1.21
TNIP1-217ENST00000523200 MLH3Q9UHC1 1453 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms