RNA–Protein interactions for RNA: ENST00000522778.1

LINC01609-202, Transcript of long intergenic non-protein coding RNA 1609, humanhuman

TSL 2 BASIC

Gene LINC01609, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01609-202ENST00000522778 HOXB3P14651 431 aaPredicted RBP14.29□□□□□ -0.12
LINC01609-202ENST00000522778 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.13
LINC01609-202ENST00000522778 RYDENQ9NUL5 291 aaKnown RBP14.27□□□□□ -0.13
LINC01609-202ENST00000522778 RIMBP2O15034 1052 aa14.24□□□□□ -0.13
LINC01609-202ENST00000522778 EMP3P54852 163 aa14.24□□□□□ -0.13
LINC01609-202ENST00000522778 C2orf72A6NCS6 295 aa14.23□□□□□ -0.13
LINC01609-202ENST00000522778 TMC2Q8TDI7 906 aa14.23□□□□□ -0.13
LINC01609-202ENST00000522778 PCDH10Q9P2E7 1040 aa14.22□□□□□ -0.13
LINC01609-202ENST00000522778 KIF3CO14782 793 aa14.19□□□□□ -0.14
LINC01609-202ENST00000522778 CDAN1Q8IWY9 1227 aa14.17□□□□□ -0.14
LINC01609-202ENST00000522778 HOXB1P14653 301 aaPredicted RBP14.15□□□□□ -0.14
LINC01609-202ENST00000522778 FAM205CA6NFA0 338 aa14.14□□□□□ -0.15
LINC01609-202ENST00000522778 GTPBP6O43824 516 aaPredicted RBP14.14□□□□□ -0.15
LINC01609-202ENST00000522778 ZSWIM6Q9HCJ5 1215 aa14.13□□□□□ -0.15
LINC01609-202ENST00000522778 PLSCR2Q9NRY7 297 aa14.13□□□□□ -0.15
LINC01609-202ENST00000522778 HS3ST6Q96QI5 342 aa14.1□□□□□ -0.15
LINC01609-202ENST00000522778 ARSIQ5FYB1 569 aa14.07□□□□□ -0.16
LINC01609-202ENST00000522778 ERBB3P21860 1342 aa14.07□□□□□ -0.16
LINC01609-202ENST00000522778 GPR153Q6NV75 609 aa14.06□□□□□ -0.16
LINC01609-202ENST00000522778 GPHNQ9NQX3 736 aaPredicted RBP14.05□□□□□ -0.16
LINC01609-202ENST00000522778 POTEB3A0JP26 581 aa14.03□□□□□ -0.16
LINC01609-202ENST00000522778 POTEBQ6S5H4 581 aa14.03□□□□□ -0.16
LINC01609-202ENST00000522778 BBXQ8WY36 941 aaPredicted RBP14.03□□□□□ -0.16
LINC01609-202ENST00000522778 FOXK1P85037 733 aa14.02□□□□□ -0.17
LINC01609-202ENST00000522778 KHSRPQ92945 711 aaKnown RBP eCLIP14.02□□□□□ -0.17
LINC01609-202ENST00000522778 DSG2Q14126 1118 aa14.01□□□□□ -0.17
LINC01609-202ENST00000522778 PLPP6Q8IY26 295 aa14.01□□□□□ -0.17
LINC01609-202ENST00000522778 VARS2Q5ST30 1063 aaKnown RBP14□□□□□ -0.17
LINC01609-202ENST00000522778 SLC34A2O95436 690 aa13.99□□□□□ -0.17
LINC01609-202ENST00000522778 PCDHGA4Q9Y5G9 962 aa13.98□□□□□ -0.17
LINC01609-202ENST00000522778 NUDT7P0C024 238 aa13.97□□□□□ -0.17
LINC01609-202ENST00000522778 CRISPLD2Q9H0B8 497 aa13.97□□□□□ -0.17
LINC01609-202ENST00000522778 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.95□□□□□ -0.18
LINC01609-202ENST00000522778 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
LINC01609-202ENST00000522778 PDE4AP27815 886 aa13.94□□□□□ -0.18
LINC01609-202ENST00000522778 PPP1R15BQ5SWA1 713 aa13.92□□□□□ -0.18
LINC01609-202ENST00000522778 ZNF316A6NFI3 1004 aaPredicted RBP13.91□□□□□ -0.18
LINC01609-202ENST00000522778 LARP6Q9BRS8 491 aaKnown RBP13.9□□□□□ -0.18
LINC01609-202ENST00000522778 SPRYD3Q8NCJ5 442 aa13.89□□□□□ -0.19
LINC01609-202ENST00000522778 PTCD2Q8WV60 388 aaKnown RBP13.89□□□□□ -0.19
LINC01609-202ENST00000522778 KRTAP3-3Q9BYR6 98 aa13.89□□□□□ -0.19
LINC01609-202ENST00000522778 KRTAP3-2Q9BYR7 98 aa13.89□□□□□ -0.19
LINC01609-202ENST00000522778 DDX27Q96GQ7 796 aaKnown RBP13.87□□□□□ -0.19
LINC01609-202ENST00000522778 TBC1D12O60347 775 aa13.86□□□□□ -0.19
LINC01609-202ENST00000522778 CADPS2Q86UW7 1296 aa13.86□□□□□ -0.19
LINC01609-202ENST00000522778 UPF1Q92900 1129 aaKnown RBP eCLIP13.86□□□□□ -0.19
LINC01609-202ENST00000522778 LHX6Q9UPM6 363 aa13.86□□□□□ -0.19
LINC01609-202ENST00000522778 ZNF687Q8N1G0 1237 aa13.85□□□□□ -0.19
LINC01609-202ENST00000522778 CFAP44Q96MT7 982 aa13.85□□□□□ -0.19
LINC01609-202ENST00000522778 PAXIP1Q6ZW49 1069 aaPredicted RBP13.83□□□□□ -0.2
LINC01609-202ENST00000522778 SPNS2Q8IVW8 549 aa13.8□□□□□ -0.2
LINC01609-202ENST00000522778 MFSD10Q14728 455 aa13.79□□□□□ -0.2
LINC01609-202ENST00000522778 OXER1Q8TDS5 423 aa13.79□□□□□ -0.2
LINC01609-202ENST00000522778 KDM4FA0A1W2PPD8 638 aa13.75□□□□□ -0.21
LINC01609-202ENST00000522778 PSDA5PKW4 1024 aaPredicted RBP13.74□□□□□ -0.21
LINC01609-202ENST00000522778 MMRN1Q13201 1228 aa13.71□□□□□ -0.21
LINC01609-202ENST00000522778 PBX2P40425 430 aa13.69□□□□□ -0.22
LINC01609-202ENST00000522778 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
LINC01609-202ENST00000522778 PPP4R3BQ5MIZ7 849 aa13.68□□□□□ -0.22
LINC01609-202ENST00000522778 EMILIN3Q9NT22 766 aa13.68□□□□□ -0.22
LINC01609-202ENST00000522778 AXIN2Q9Y2T1 843 aa13.68□□□□□ -0.22
LINC01609-202ENST00000522778 ANKRD13DQ6ZTN6 518 aa13.67□□□□□ -0.22
LINC01609-202ENST00000522778 EVI5O60447 810 aa13.66□□□□□ -0.22
LINC01609-202ENST00000522778 LSM11P83369 360 aaKnown RBP eCLIP13.65□□□□□ -0.22
LINC01609-202ENST00000522778 ZNF454Q8N9F8 522 aa13.64□□□□□ -0.23
LINC01609-202ENST00000522778 POTEEQ6S8J3 1075 aa13.63□□□□□ -0.23
LINC01609-202ENST00000522778 ARHGAP33O14559 1287 aa13.61□□□□□ -0.23
LINC01609-202ENST00000522778 CAMK2BQ13554 666 aa13.59□□□□□ -0.23
LINC01609-202ENST00000522778 DPYSL4O14531 572 aa13.57□□□□□ -0.24
LINC01609-202ENST00000522778 PSEN2P49810 448 aa13.57□□□□□ -0.24
LINC01609-202ENST00000522778 KCNH8Q96L42 1107 aa13.57□□□□□ -0.24
LINC01609-202ENST00000522778 ANO8Q9HCE9 1232 aaPredicted RBP13.57□□□□□ -0.24
LINC01609-202ENST00000522778 WDR70Q9NW82 654 aa13.57□□□□□ -0.24
LINC01609-202ENST00000522778 FOSBP53539 338 aa13.56□□□□□ -0.24
LINC01609-202ENST00000522778 JPH4Q96JJ6 628 aa13.56□□□□□ -0.24
LINC01609-202ENST00000522778 KCNK17Q96T54 332 aa13.55□□□□□ -0.24
LINC01609-202ENST00000522778 MYT1LQ9UL68 1186 aa13.55□□□□□ -0.24
LINC01609-202ENST00000522778 PTGER2P43116 358 aa13.54□□□□□ -0.24
LINC01609-202ENST00000522778 RNF166Q96A37 237 aaPredicted RBP13.53□□□□□ -0.24
LINC01609-202ENST00000522778 DMRTA1Q5VZB9 504 aa13.52□□□□□ -0.25
LINC01609-202ENST00000522778 E2F4Q16254 413 aa13.5□□□□□ -0.25
LINC01609-202ENST00000522778 ADGRD1Q6QNK2 874 aa13.5□□□□□ -0.25
LINC01609-202ENST00000522778 ZDHHC16Q969W1 377 aa13.5□□□□□ -0.25
LINC01609-202ENST00000522778 BCL2L12Q9HB09 334 aa13.5□□□□□ -0.25
LINC01609-202ENST00000522778 TSHZ2Q9NRE2 1034 aa13.5□□□□□ -0.25
LINC01609-202ENST00000522778 PTPREP23469 700 aa13.47□□□□□ -0.25
LINC01609-202ENST00000522778 ADAM33Q9BZ11 813 aa13.46□□□□□ -0.25
LINC01609-202ENST00000522778 PCDHGA10Q9Y5H3 936 aa13.46□□□□□ -0.25
LINC01609-202ENST00000522778 TK2O00142 265 aa13.44□□□□□ -0.26
LINC01609-202ENST00000522778 PHF14O94880 888 aa13.43□□□□□ -0.26
LINC01609-202ENST00000522778 TYW1BQ6NUM6 668 aa13.42□□□□□ -0.26
LINC01609-202ENST00000522778 PDIA6Q15084 440 aa13.41□□□□□ -0.26
LINC01609-202ENST00000522778 DDX12PQ92771 950 aa13.41□□□□□ -0.26
LINC01609-202ENST00000522778 FBXW7Q969H0 707 aa13.4□□□□□ -0.26
LINC01609-202ENST00000522778 STAC3Q96MF2 364 aa13.39□□□□□ -0.27
LINC01609-202ENST00000522778 PLCB2Q00722 1185 aa13.38□□□□□ -0.27
LINC01609-202ENST00000522778 SPDYE16A6NNV3 312 aaPredicted RBP13.37□□□□□ -0.27
LINC01609-202ENST00000522778 EPAS1Q99814 870 aa13.37□□□□□ -0.27
LINC01609-202ENST00000522778 VPS9D1Q9Y2B5 631 aa13.37□□□□□ -0.27
LINC01609-202ENST00000522778 HRO43593 1189 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms