RNA–Protein interactions for RNA: ENST00000522610.5

POLB-213, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 1,341 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-213ENST00000522610 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
POLB-213ENST00000522610 ARAP3Q8WWN8 1544 aa19.21■□□□□ 0.67
POLB-213ENST00000522610 PHLDB1Q86UU1 1377 aa19.2■□□□□ 0.66
POLB-213ENST00000522610 ARHGAP5Q13017 1502 aa19.2■□□□□ 0.66
POLB-213ENST00000522610 PREX2Q70Z35 1606 aa19.18■□□□□ 0.66
POLB-213ENST00000522610 AKNAQ7Z591 1439 aa19.18■□□□□ 0.66
POLB-213ENST00000522610 MAP3K1Q13233 1512 aa19.16■□□□□ 0.66
POLB-213ENST00000522610 LRRC9Q6ZRR7 1453 aa19.16■□□□□ 0.66
POLB-213ENST00000522610 FRMPD1Q5SYB0 1578 aa19.16■□□□□ 0.66
POLB-213ENST00000522610 ADGRL1O94910 1474 aa19.15■□□□□ 0.66
POLB-213ENST00000522610 CDC42BPAQ5VT25 1732 aa19.15■□□□□ 0.66
POLB-213ENST00000522610 CDC42BPBQ9Y5S2 1711 aa19.15■□□□□ 0.66
POLB-213ENST00000522610 GPATCH8Q9UKJ3 1502 aaKnown RBP19.13■□□□□ 0.65
POLB-213ENST00000522610 EFCAB2Q5VUJ9 269 aa19.13■□□□□ 0.65
POLB-213ENST00000522610 DENND4BO75064 1496 aaPredicted RBP19.12■□□□□ 0.65
POLB-213ENST00000522610 CCNB3Q8WWL7 1395 aa19.12■□□□□ 0.65
POLB-213ENST00000522610 RAPGEF3O95398 923 aa19.12■□□□□ 0.65
POLB-213ENST00000522610 NCOA2Q15596 1464 aa19.11■□□□□ 0.65
POLB-213ENST00000522610 SUPT6HQ7KZ85 1726 aaKnown RBP19.11■□□□□ 0.65
POLB-213ENST00000522610 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
POLB-213ENST00000522610 RICTORQ6R327 1708 aa19.1■□□□□ 0.65
POLB-213ENST00000522610 SCAPERQ9BY12 1400 aa19.1■□□□□ 0.65
POLB-213ENST00000522610 POGZQ7Z3K3 1410 aa19.09■□□□□ 0.65
POLB-213ENST00000522610 ABCC1P33527 1531 aa19.08■□□□□ 0.65
POLB-213ENST00000522610 APLP2Q06481 763 aa19.07■□□□□ 0.64
POLB-213ENST00000522610 SAMD9LQ8IVG5 1584 aa19.06■□□□□ 0.64
POLB-213ENST00000522610 ITSN2Q9NZM3 1697 aa19.06■□□□□ 0.64
POLB-213ENST00000522610 ZMYM4Q5VZL5 1548 aa19.05■□□□□ 0.64
POLB-213ENST00000522610 CFDP1Q9UEE9 299 aaPredicted RBP19.04■□□□□ 0.64
POLB-213ENST00000522610 ZNF777Q9ULD5 760 aaPredicted RBP19.04■□□□□ 0.64
POLB-213ENST00000522610 ARHGEF12Q9NZN5 1544 aa19.04■□□□□ 0.64
POLB-213ENST00000522610 SYCP2Q9BX26 1530 aa19.03■□□□□ 0.64
POLB-213ENST00000522610 ZNF518AQ6AHZ1 1483 aa19.02■□□□□ 0.64
POLB-213ENST00000522610 ARHGEF40Q8TER5 1519 aa19.02■□□□□ 0.64
POLB-213ENST00000522610 TRAPPC8Q9Y2L5 1435 aa19■□□□□ 0.63
POLB-213ENST00000522610 KDM5CP41229 1560 aa19■□□□□ 0.63
POLB-213ENST00000522610 ZFYVE16Q7Z3T8 1539 aa18.99■□□□□ 0.63
POLB-213ENST00000522610 AFAP1Q8N556 730 aa18.99■□□□□ 0.63
POLB-213ENST00000522610 YEATS2Q9ULM3 1422 aa18.98■□□□□ 0.63
POLB-213ENST00000522610 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
POLB-213ENST00000522610 PLEKHH2Q8IVE3 1493 aa18.97■□□□□ 0.63
POLB-213ENST00000522610 ZNF644Q9H582 1327 aaPredicted RBP18.97■□□□□ 0.63
POLB-213ENST00000522610 KIAA1107Q9UPP5 1409 aa18.97■□□□□ 0.63
POLB-213ENST00000522610 MAGI2Q86UL8 1455 aa18.96■□□□□ 0.63
POLB-213ENST00000522610 MYOM3Q5VTT5 1437 aa18.96■□□□□ 0.63
POLB-213ENST00000522610 CAMSAP2Q08AD1 1489 aa18.96■□□□□ 0.63
POLB-213ENST00000522610 HECW2Q9P2P5 1572 aa18.95■□□□□ 0.62
POLB-213ENST00000522610 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.62
POLB-213ENST00000522610 MBD5Q9P267 1494 aa18.91■□□□□ 0.62
POLB-213ENST00000522610 MLH3Q9UHC1 1453 aa18.91■□□□□ 0.62
POLB-213ENST00000522610 MIA2Q96PC5 1412 aa18.9■□□□□ 0.62
POLB-213ENST00000522610 ABCA6Q8N139 1617 aa18.9■□□□□ 0.62
POLB-213ENST00000522610 DIP2CQ9Y2E4 1556 aa18.89■□□□□ 0.61
POLB-213ENST00000522610 MYT1LQ9UL68 1186 aa18.88■□□□□ 0.61
POLB-213ENST00000522610 SIGLEC1Q9BZZ2 1709 aa18.88■□□□□ 0.61
POLB-213ENST00000522610 INO80Q9ULG1 1556 aaPredicted RBP18.87■□□□□ 0.61
POLB-213ENST00000522610 KDM4FA0A1W2PPD8 638 aa18.87■□□□□ 0.61
POLB-213ENST00000522610 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
POLB-213ENST00000522610 KIDINS220Q9ULH0 1771 aa18.87■□□□□ 0.61
POLB-213ENST00000522610 ATP10AO60312 1499 aa18.86■□□□□ 0.61
POLB-213ENST00000522610 CCDC141Q6ZP82 1450 aa18.86■□□□□ 0.61
POLB-213ENST00000522610 C9orf84Q5VXU9 1444 aa18.86■□□□□ 0.61
POLB-213ENST00000522610 SPAG9O60271 1321 aaKnown RBP18.86■□□□□ 0.61
POLB-213ENST00000522610 ATP7AQ04656 1500 aa18.86■□□□□ 0.61
POLB-213ENST00000522610 FGD6Q6ZV73 1430 aa18.86■□□□□ 0.61
POLB-213ENST00000522610 PPARGC1BQ86YN6 1023 aaKnown RBP18.85■□□□□ 0.61
POLB-213ENST00000522610 PTPN23Q9H3S7 1636 aa18.85■□□□□ 0.61
POLB-213ENST00000522610 ARHGEF5Q12774 1597 aa18.84■□□□□ 0.61
POLB-213ENST00000522610 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.61
POLB-213ENST00000522610 MAPK8IP2Q13387 824 aaPredicted RBP18.82■□□□□ 0.6
POLB-213ENST00000522610 REREQ9P2R6 1566 aa18.81■□□□□ 0.6
POLB-213ENST00000522610 TCOF1Q13428 1488 aaKnown RBP18.81■□□□□ 0.6
POLB-213ENST00000522610 BCORL1Q5H9F3 1711 aa18.8■□□□□ 0.6
POLB-213ENST00000522610 RTEL1-TNFRSF6BF6WH68 1400 aa18.77■□□□□ 0.6
POLB-213ENST00000522610 ADAMTSL3P82987 1691 aa18.77■□□□□ 0.59
POLB-213ENST00000522610 RSPH4AQ5TD94 716 aa18.76■□□□□ 0.59
POLB-213ENST00000522610 PLXNC1O60486 1568 aa18.76■□□□□ 0.59
POLB-213ENST00000522610 MADDQ8WXG6 1647 aa18.75■□□□□ 0.59
POLB-213ENST00000522610 A2MP01023 1474 aa18.75■□□□□ 0.59
POLB-213ENST00000522610 AGLP35573 1532 aa18.75■□□□□ 0.59
POLB-213ENST00000522610 CROCC2H7BZ55 1655 aa18.74■□□□□ 0.59
POLB-213ENST00000522610 MAST1Q9Y2H9 1570 aa18.74■□□□□ 0.59
POLB-213ENST00000522610 DNMT1P26358 1616 aaKnown RBP18.74■□□□□ 0.59
POLB-213ENST00000522610 MLECQ14165 292 aa18.74■□□□□ 0.59
POLB-213ENST00000522610 ABCC5O15440 1437 aa18.73■□□□□ 0.59
POLB-213ENST00000522610 ADGBQ8N7X0 1667 aa18.73■□□□□ 0.59
POLB-213ENST00000522610 DAPK1P53355 1430 aa18.73■□□□□ 0.59
POLB-213ENST00000522610 TSPY4P0CV99 314 aa18.73■□□□□ 0.59
POLB-213ENST00000522610 TSPY10P0CW01 314 aa18.73■□□□□ 0.59
POLB-213ENST00000522610 SHANK2Q9UPX8 1470 aa18.72■□□□□ 0.59
POLB-213ENST00000522610 FAM50AQ14320 339 aaKnown RBP18.72■□□□□ 0.59
POLB-213ENST00000522610 RIMS1Q86UR5 1692 aaKnown RBP18.68■□□□□ 0.58
POLB-213ENST00000522610 PTPRMP28827 1452 aa18.67■□□□□ 0.58
POLB-213ENST00000522610 FER1L4A9Z1Z3 1794 aa18.67■□□□□ 0.58
POLB-213ENST00000522610 DHX29Q7Z478 1369 aaKnown RBP18.67■□□□□ 0.58
POLB-213ENST00000522610 RRBP1Q9P2E9 1410 aaKnown RBP18.62■□□□□ 0.57
POLB-213ENST00000522610 KIF15Q9NS87 1388 aa18.62■□□□□ 0.57
POLB-213ENST00000522610 CHIC2Q9UKJ5 165 aa18.62■□□□□ 0.57
POLB-213ENST00000522610 PTPRKQ15262 1439 aa18.61■□□□□ 0.57
POLB-213ENST00000522610 DUOX2Q9NRD8 1548 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms