RNA–Protein interactions for RNA: ENST00000522564.5

GSDMB-213, Transcript of gasdermin B, humanhuman

TSL 2

Gene GSDMB, Length 958 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-213ENST00000522564 CEBPAP49715 358 aaPredicted RBP12.18□□□□□ -0.46
GSDMB-213ENST00000522564 ARHGEF12Q9NZN5 1544 aa12.17□□□□□ -0.46
GSDMB-213ENST00000522564 ATP10AO60312 1499 aa12.17□□□□□ -0.46
GSDMB-213ENST00000522564 PTPRTO14522 1441 aa12.17□□□□□ -0.46
GSDMB-213ENST00000522564 SAMD9Q5K651 1589 aa12.17□□□□□ -0.46
GSDMB-213ENST00000522564 HECW1Q76N89 1606 aa12.16□□□□□ -0.46
GSDMB-213ENST00000522564 C9orf84Q5VXU9 1444 aa12.16□□□□□ -0.46
GSDMB-213ENST00000522564 SCAPERQ9BY12 1400 aa12.16□□□□□ -0.46
GSDMB-213ENST00000522564 SETD1BQ9UPS6 1966 aaKnown RBP12.15□□□□□ -0.46
GSDMB-213ENST00000522564 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.15□□□□□ -0.46
GSDMB-213ENST00000522564 IQSEC2Q5JU85 1478 aa12.14□□□□□ -0.47
GSDMB-213ENST00000522564 SIGLEC1Q9BZZ2 1709 aa12.14□□□□□ -0.47
GSDMB-213ENST00000522564 STRCQ7RTU9 1775 aa12.13□□□□□ -0.47
GSDMB-213ENST00000522564 ESF1Q9H501 851 aaKnown RBP12.13□□□□□ -0.47
GSDMB-213ENST00000522564 PLCH2O75038 1416 aa12.12□□□□□ -0.47
GSDMB-213ENST00000522564 EFCAB2Q5VUJ9 269 aa12.12□□□□□ -0.47
GSDMB-213ENST00000522564 RANGAP1P46060 587 aaPredicted RBP12.11□□□□□ -0.47
GSDMB-213ENST00000522564 MYT1LQ9UL68 1186 aa12.11□□□□□ -0.47
GSDMB-213ENST00000522564 CSRNP3Q8WYN3 585 aa12.1□□□□□ -0.47
GSDMB-213ENST00000522564 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
GSDMB-213ENST00000522564 UBAP1LF5GYI3 381 aa12.07□□□□□ -0.48
GSDMB-213ENST00000522564 TRAPPC8Q9Y2L5 1435 aa12.07□□□□□ -0.48
GSDMB-213ENST00000522564 ZNF518AQ6AHZ1 1483 aa12.07□□□□□ -0.48
GSDMB-213ENST00000522564 CDK11AQ9UQ88 783 aaPredicted RBP12.06□□□□□ -0.48
GSDMB-213ENST00000522564 NCOA1Q15788 1441 aa12.05□□□□□ -0.48
GSDMB-213ENST00000522564 AFAP1Q8N556 730 aa12.04□□□□□ -0.48
GSDMB-213ENST00000522564 CNTLNQ9NXG0 1405 aa12.03□□□□□ -0.48
GSDMB-213ENST00000522564 CDK13Q14004 1512 aaKnown RBP12.01□□□□□ -0.49
GSDMB-213ENST00000522564 REREQ9P2R6 1566 aa12.01□□□□□ -0.49
GSDMB-213ENST00000522564 ATP1B4Q9UN42 357 aaPredicted RBP12.01□□□□□ -0.49
GSDMB-213ENST00000522564 PKD2Q13563 968 aa12□□□□□ -0.49
GSDMB-213ENST00000522564 AGLP35573 1532 aa12□□□□□ -0.49
GSDMB-213ENST00000522564 KDM5CP41229 1560 aa12□□□□□ -0.49
GSDMB-213ENST00000522564 C3P01024 1663 aa12□□□□□ -0.49
GSDMB-213ENST00000522564 ZNF335Q9H4Z2 1342 aaPredicted RBP11.99□□□□□ -0.49
GSDMB-213ENST00000522564 MLH3Q9UHC1 1453 aa11.99□□□□□ -0.49
GSDMB-213ENST00000522564 ARHGAP5Q13017 1502 aa11.99□□□□□ -0.49
GSDMB-213ENST00000522564 MYO5CQ9NQX4 1742 aa11.99□□□□□ -0.49
GSDMB-213ENST00000522564 CAMSAP1Q5T5Y3 1602 aa11.98□□□□□ -0.49
GSDMB-213ENST00000522564 DIP2CQ9Y2E4 1556 aa11.98□□□□□ -0.49
GSDMB-213ENST00000522564 NPATQ14207 1427 aa11.98□□□□□ -0.49
GSDMB-213ENST00000522564 NCKAP5LQ9HCH0 1330 aa11.98□□□□□ -0.49
GSDMB-213ENST00000522564 CLIP1P30622 1438 aa11.96□□□□□ -0.49
GSDMB-213ENST00000522564 EEA1Q15075 1411 aa11.96□□□□□ -0.49
GSDMB-213ENST00000522564 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.49
GSDMB-213ENST00000522564 FMN1Q68DA7 1419 aa11.95□□□□□ -0.5
GSDMB-213ENST00000522564 TOM1O60784 492 aa11.95□□□□□ -0.5
GSDMB-213ENST00000522564 PHF23Q9BUL5 403 aaPredicted RBP11.95□□□□□ -0.5
GSDMB-213ENST00000522564 KIF14Q15058 1648 aa11.95□□□□□ -0.5
GSDMB-213ENST00000522564 TROQ12816 1431 aaPredicted RBP11.94□□□□□ -0.5
GSDMB-213ENST00000522564 HSPA1LP34931 641 aa11.94□□□□□ -0.5
GSDMB-213ENST00000522564 PPP6R1Q9UPN7 881 aa11.94□□□□□ -0.5
GSDMB-213ENST00000522564 PLA2R1Q13018 1463 aa11.94□□□□□ -0.5
GSDMB-213ENST00000522564 ZMYM3Q14202 1370 aa11.93□□□□□ -0.5
GSDMB-213ENST00000522564 ABCA6Q8N139 1617 aa11.93□□□□□ -0.5
GSDMB-213ENST00000522564 PIP4K2BP78356 416 aa11.92□□□□□ -0.5
GSDMB-213ENST00000522564 MED1Q15648 1581 aaPredicted RBP11.92□□□□□ -0.5
GSDMB-213ENST00000522564 TCOF1Q13428 1488 aaKnown RBP11.89□□□□□ -0.51
GSDMB-213ENST00000522564 MROH2AA6NES4 1674 aa11.89□□□□□ -0.51
GSDMB-213ENST00000522564 ABCC1P33527 1531 aa11.88□□□□□ -0.51
GSDMB-213ENST00000522564 SPAG9O60271 1321 aaKnown RBP11.86□□□□□ -0.51
GSDMB-213ENST00000522564 UBTFP17480 764 aaKnown RBP11.86□□□□□ -0.51
GSDMB-213ENST00000522564 CEP170BQ9Y4F5 1589 aaPredicted RBP11.86□□□□□ -0.51
GSDMB-213ENST00000522564 CPS1P31327 1500 aa11.86□□□□□ -0.51
GSDMB-213ENST00000522564 KIDINS220Q9ULH0 1771 aa11.85□□□□□ -0.51
GSDMB-213ENST00000522564 PTPRKQ15262 1439 aa11.85□□□□□ -0.51
GSDMB-213ENST00000522564 ZNF142P52746 1687 aaPredicted RBP11.84□□□□□ -0.51
GSDMB-213ENST00000522564 CDC42BPBQ9Y5S2 1711 aa11.84□□□□□ -0.51
GSDMB-213ENST00000522564 GGT6Q6P531 493 aa11.84□□□□□ -0.51
GSDMB-213ENST00000522564 MYO3AQ8NEV4 1616 aa11.84□□□□□ -0.51
GSDMB-213ENST00000522564 ITSN2Q9NZM3 1697 aa11.84□□□□□ -0.51
GSDMB-213ENST00000522564 PREX2Q70Z35 1606 aa11.83□□□□□ -0.52
GSDMB-213ENST00000522564 ZNF777Q9ULD5 760 aaPredicted RBP11.83□□□□□ -0.52
GSDMB-213ENST00000522564 SUPT6HQ7KZ85 1726 aaKnown RBP11.83□□□□□ -0.52
GSDMB-213ENST00000522564 A2ML1A8K2U0 1454 aa11.82□□□□□ -0.52
GSDMB-213ENST00000522564 ARHGAP35Q9NRY4 1499 aa11.82□□□□□ -0.52
GSDMB-213ENST00000522564 SHANK2Q9UPX8 1470 aa11.82□□□□□ -0.52
GSDMB-213ENST00000522564 SAMD9LQ8IVG5 1584 aa11.81□□□□□ -0.52
GSDMB-213ENST00000522564 HNRNPMP52272 730 aaKnown RBP eCLIP11.8□□□□□ -0.52
GSDMB-213ENST00000522564 ANKLE2Q86XL3 938 aa11.8□□□□□ -0.52
GSDMB-213ENST00000522564 A2MP01023 1474 aa11.8□□□□□ -0.52
GSDMB-213ENST00000522564 CLTCQ00610 1675 aaKnown RBP11.8□□□□□ -0.52
GSDMB-213ENST00000522564 CCDC18Q5T9S5 1454 aa11.79□□□□□ -0.52
GSDMB-213ENST00000522564 THEMISQ8N1K5 641 aaPredicted RBP11.77□□□□□ -0.53
GSDMB-213ENST00000522564 EHMT2Q96KQ7 1210 aa11.77□□□□□ -0.53
GSDMB-213ENST00000522564 DNMT1P26358 1616 aaKnown RBP11.77□□□□□ -0.53
GSDMB-213ENST00000522564 KIAA1107Q9UPP5 1409 aa11.77□□□□□ -0.53
GSDMB-213ENST00000522564 PLEKHH2Q8IVE3 1493 aa11.76□□□□□ -0.53
GSDMB-213ENST00000522564 ATP7AQ04656 1500 aa11.76□□□□□ -0.53
GSDMB-213ENST00000522564 SYCP2Q9BX26 1530 aa11.76□□□□□ -0.53
GSDMB-213ENST00000522564 PLXNC1O60486 1568 aa11.76□□□□□ -0.53
GSDMB-213ENST00000522564 TNRQ92752 1358 aa11.76□□□□□ -0.53
GSDMB-213ENST00000522564 SENP3Q9H4L4 574 aaPredicted RBP11.75□□□□□ -0.53
GSDMB-213ENST00000522564 CFDP1Q9UEE9 299 aaPredicted RBP11.75□□□□□ -0.53
GSDMB-213ENST00000522564 CASKIN1Q8WXD9 1431 aa11.75□□□□□ -0.53
GSDMB-213ENST00000522564 CDC42BPAQ5VT25 1732 aa11.74□□□□□ -0.53
GSDMB-213ENST00000522564 POLR1AO95602 1720 aaPredicted RBP11.73□□□□□ -0.53
GSDMB-213ENST00000522564 NEURL4Q96JN8 1562 aa11.73□□□□□ -0.53
GSDMB-213ENST00000522564 GPATCH8Q9UKJ3 1502 aaKnown RBP11.72□□□□□ -0.53
GSDMB-213ENST00000522564 NPHP4O75161 1426 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms