RNA–Protein interactions for RNA: ENST00000522564.5

GSDMB-213, Transcript of gasdermin B, humanhuman

TSL 2

Gene GSDMB, Length 958 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-213ENST00000522564 NISCHQ9Y2I1 1504 aa18.29■□□□□ 0.52
GSDMB-213ENST00000522564 ABCC9O60706 1549 aa17.01■□□□□ 0.31
GSDMB-213ENST00000522564 CCDC180Q9P1Z9 1646 aa16.57■□□□□ 0.24
GSDMB-213ENST00000522564 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
GSDMB-213ENST00000522564 RB1CC1Q8TDY2 1594 aa16.02■□□□□ 0.16
GSDMB-213ENST00000522564 NACADO15069 1562 aa15.82■□□□□ 0.12
GSDMB-213ENST00000522564 PABPN1Q86U42 306 aaKnown RBP eCLIP15.8■□□□□ 0.126e-8■■□□□ 14
GSDMB-213ENST00000522564 DCAF8L2P0C7V8 631 aa15.71■□□□□ 0.11
GSDMB-213ENST00000522564 UNC13AQ9UPW8 1703 aa15.53■□□□□ 0.08
GSDMB-213ENST00000522564 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
GSDMB-213ENST00000522564 MYO15BQ96JP2 1530 aa15.47■□□□□ 0.07
GSDMB-213ENST00000522564 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
GSDMB-213ENST00000522564 SHROOM4Q9ULL8 1493 aa15.35■□□□□ 0.05
GSDMB-213ENST00000522564 DNAJC5Q9H3Z4 198 aa15.35■□□□□ 0.05
GSDMB-213ENST00000522564 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
GSDMB-213ENST00000522564 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
GSDMB-213ENST00000522564 DCAF1Q9Y4B6 1507 aa15.11■□□□□ 0.01
GSDMB-213ENST00000522564 SCRIBQ14160 1630 aa15.06■□□□□ 0
GSDMB-213ENST00000522564 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
GSDMB-213ENST00000522564 CUX2O14529 1486 aa14.87□□□□□ -0.03
GSDMB-213ENST00000522564 ERCC6Q03468 1493 aa14.76□□□□□ -0.05
GSDMB-213ENST00000522564 NCAPD3P42695 1498 aa14.62□□□□□ -0.07
GSDMB-213ENST00000522564 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
GSDMB-213ENST00000522564 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
GSDMB-213ENST00000522564 NESP48681 1621 aa14.46□□□□□ -0.09
GSDMB-213ENST00000522564 SMARCA2P51531 1590 aa14.44□□□□□ -0.1
GSDMB-213ENST00000522564 HMGXB3Q12766 1538 aa14.44□□□□□ -0.1
GSDMB-213ENST00000522564 THOC2Q8NI27 1593 aaKnown RBP14.38□□□□□ -0.11
GSDMB-213ENST00000522564 BAZ1BQ9UIG0 1483 aaKnown RBP14.34□□□□□ -0.11
GSDMB-213ENST00000522564 SMARCA4P51532 1647 aa14.33□□□□□ -0.11
GSDMB-213ENST00000522564 LAMC3Q9Y6N6 1575 aa14.33□□□□□ -0.12
GSDMB-213ENST00000522564 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
GSDMB-213ENST00000522564 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
GSDMB-213ENST00000522564 KIF21AQ7Z4S6 1674 aa14.22□□□□□ -0.13
GSDMB-213ENST00000522564 PEG3Q9GZU2 1588 aa14.21□□□□□ -0.14
GSDMB-213ENST00000522564 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
GSDMB-213ENST00000522564 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
GSDMB-213ENST00000522564 CADPSQ9ULU8 1353 aa14.17□□□□□ -0.14
GSDMB-213ENST00000522564 WDR62O43379 1518 aa14.13□□□□□ -0.15
GSDMB-213ENST00000522564 MROH2BQ7Z745 1585 aa14.06□□□□□ -0.16
GSDMB-213ENST00000522564 CEP164Q9UPV0 1460 aa14.05□□□□□ -0.16
GSDMB-213ENST00000522564 FANCD2Q9BXW9 1451 aa13.99□□□□□ -0.17
GSDMB-213ENST00000522564 RIMBP3CA6NJZ7 1639 aa13.92□□□□□ -0.18
GSDMB-213ENST00000522564 RIMBP3BA6NNM3 1639 aa13.92□□□□□ -0.18
GSDMB-213ENST00000522564 RIMBP3Q9UFD9 1639 aa13.92□□□□□ -0.18
GSDMB-213ENST00000522564 CFTRP13569 1480 aa13.89□□□□□ -0.19
GSDMB-213ENST00000522564 ARHGEF11O15085 1522 aa13.86□□□□□ -0.19
GSDMB-213ENST00000522564 URB2Q14146 1524 aaKnown RBP13.86□□□□□ -0.19
GSDMB-213ENST00000522564 WIZO95785 1651 aa13.85□□□□□ -0.19
GSDMB-213ENST00000522564 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
GSDMB-213ENST00000522564 CYB5RLQ6IPT4 315 aa13.85□□□□□ -0.19
GSDMB-213ENST00000522564 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
GSDMB-213ENST00000522564 AEBP2Q6ZN18 517 aaPredicted RBP13.79□□□□□ -0.2
GSDMB-213ENST00000522564 ZNF608Q9ULD9 1512 aaPredicted RBP13.75□□□□□ -0.21
GSDMB-213ENST00000522564 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
GSDMB-213ENST00000522564 ARAP1Q96P48 1450 aa13.68□□□□□ -0.22
GSDMB-213ENST00000522564 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
GSDMB-213ENST00000522564 FBLN2P98095 1184 aa13.67□□□□□ -0.22
GSDMB-213ENST00000522564 ABCC8Q09428 1581 aa13.66□□□□□ -0.22
GSDMB-213ENST00000522564 TOPBP1Q92547 1522 aa13.65□□□□□ -0.22
GSDMB-213ENST00000522564 EIF4G3O43432 1585 aaKnown RBP13.64□□□□□ -0.23
GSDMB-213ENST00000522564 PRDM2Q13029 1718 aa13.63□□□□□ -0.23
GSDMB-213ENST00000522564 AQRO60306 1485 aaKnown RBP eCLIP13.61□□□□□ -0.23
GSDMB-213ENST00000522564 CHD1O14646 1710 aa13.59□□□□□ -0.23
GSDMB-213ENST00000522564 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
GSDMB-213ENST00000522564 CCDC88BA6NC98 1476 aa13.55□□□□□ -0.24
GSDMB-213ENST00000522564 TARBP1Q13395 1621 aaKnown RBP13.53□□□□□ -0.24
GSDMB-213ENST00000522564 CHMP7Q8WUX9 453 aaPredicted RBP13.51□□□□□ -0.25
GSDMB-213ENST00000522564 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
GSDMB-213ENST00000522564 TDRD9Q8NDG6 1382 aaKnown RBP13.47□□□□□ -0.25
GSDMB-213ENST00000522564 CLASP1Q7Z460 1538 aa13.47□□□□□ -0.25
GSDMB-213ENST00000522564 SYNJ1O43426 1573 aa13.46□□□□□ -0.25
GSDMB-213ENST00000522564 SOGA1O94964 1423 aa13.46□□□□□ -0.26
GSDMB-213ENST00000522564 SNAPC4Q5SXM2 1469 aa13.45□□□□□ -0.26
GSDMB-213ENST00000522564 RAD54L2Q9Y4B4 1467 aa13.44□□□□□ -0.26
GSDMB-213ENST00000522564 MAGI1Q96QZ7 1491 aaPredicted RBP13.42□□□□□ -0.26
GSDMB-213ENST00000522564 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
GSDMB-213ENST00000522564 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
GSDMB-213ENST00000522564 GRIN2BQ13224 1484 aa13.39□□□□□ -0.27
GSDMB-213ENST00000522564 SYNJ2O15056 1496 aa13.38□□□□□ -0.27
GSDMB-213ENST00000522564 FGD5Q6ZNL6 1462 aa13.34□□□□□ -0.27
GSDMB-213ENST00000522564 CUX1P39880 1505 aa13.24□□□□□ -0.29
GSDMB-213ENST00000522564 PBRM1Q86U86 1689 aa13.21□□□□□ -0.29
GSDMB-213ENST00000522564 GRIN2AQ12879 1464 aa13.19□□□□□ -0.3
GSDMB-213ENST00000522564 ERCC6L2Q5T890 1561 aa13.19□□□□□ -0.3
GSDMB-213ENST00000522564 ABCA10Q8WWZ4 1543 aa13.18□□□□□ -0.3
GSDMB-213ENST00000522564 CEP170Q5SW79 1584 aa13.18□□□□□ -0.3
GSDMB-213ENST00000522564 ILDR1Q86SU0 546 aaPredicted RBP13.17□□□□□ -0.3
GSDMB-213ENST00000522564 NUP160Q12769 1436 aa13.16□□□□□ -0.3
GSDMB-213ENST00000522564 ABCA5Q8WWZ7 1642 aa13.15□□□□□ -0.3
GSDMB-213ENST00000522564 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
GSDMB-213ENST00000522564 FAM69CQ0P6D2 419 aa13.15□□□□□ -0.3
GSDMB-213ENST00000522564 KIF13AQ9H1H9 1805 aa13.13□□□□□ -0.31
GSDMB-213ENST00000522564 KDM4FA0A1W2PPD8 638 aa13.11□□□□□ -0.31
GSDMB-213ENST00000522564 FHAD1B1AJZ9 1412 aa13.11□□□□□ -0.31
GSDMB-213ENST00000522564 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
GSDMB-213ENST00000522564 SHROOM2Q13796 1616 aa13.1□□□□□ -0.31
GSDMB-213ENST00000522564 ADAMTS12P58397 1594 aa13.1□□□□□ -0.31
GSDMB-213ENST00000522564 WRNQ14191 1432 aaPredicted RBP eCLIP13.09□□□□□ -0.31
GSDMB-213ENST00000522564 PRG4Q92954 1404 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms