RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-215ENST00000522115 CRISPLD2Q9H0B8 497 aa11.36□□□□□ -0.59
PTPN12-215ENST00000522115 SLAIN1Q8ND83 568 aa11.35□□□□□ -0.59
PTPN12-215ENST00000522115 GPHNQ9NQX3 736 aaPredicted RBP11.34□□□□□ -0.59
PTPN12-215ENST00000522115 CADPS2Q86UW7 1296 aa11.33□□□□□ -0.6
PTPN12-215ENST00000522115 NCKAP5LQ9HCH0 1330 aa11.32□□□□□ -0.6
PTPN12-215ENST00000522115 C2orf72A6NCS6 295 aa11.31□□□□□ -0.6
PTPN12-215ENST00000522115 TMC2Q8TDI7 906 aa11.31□□□□□ -0.6
PTPN12-215ENST00000522115 TSHZ2Q9NRE2 1034 aa11.31□□□□□ -0.6
PTPN12-215ENST00000522115 PDE4AP27815 886 aa11.3□□□□□ -0.6
PTPN12-215ENST00000522115 FOXK1P85037 733 aa11.28□□□□□ -0.6
PTPN12-215ENST00000522115 MFSD10Q14728 455 aa11.28□□□□□ -0.6
PTPN12-215ENST00000522115 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
PTPN12-215ENST00000522115 SNPHO15079 494 aa11.23□□□□□ -0.61
PTPN12-215ENST00000522115 DSG2Q14126 1118 aa11.23□□□□□ -0.61
PTPN12-215ENST00000522115 LARP6Q9BRS8 491 aaKnown RBP11.23□□□□□ -0.61
PTPN12-215ENST00000522115 HAP1P54257 671 aaPredicted RBP11.22□□□□□ -0.61
PTPN12-215ENST00000522115 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
PTPN12-215ENST00000522115 SLC34A2O95436 690 aa11.2□□□□□ -0.62
PTPN12-215ENST00000522115 PPP1R15BQ5SWA1 713 aa11.2□□□□□ -0.62
PTPN12-215ENST00000522115 HOXB3P14651 431 aaPredicted RBP11.19□□□□□ -0.62
PTPN12-215ENST00000522115 PLPP6Q8IY26 295 aa11.19□□□□□ -0.62
PTPN12-215ENST00000522115 DOK7Q18PE1 504 aa11.18□□□□□ -0.62
PTPN12-215ENST00000522115 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
PTPN12-215ENST00000522115 CAMK2BQ13554 666 aa11.15□□□□□ -0.62
PTPN12-215ENST00000522115 ZSWIM6Q9HCJ5 1215 aa11.15□□□□□ -0.62
PTPN12-215ENST00000522115 POTEMA6NI47 508 aa11.12□□□□□ -0.63
PTPN12-215ENST00000522115 RIMBP2O15034 1052 aa11.12□□□□□ -0.63
PTPN12-215ENST00000522115 PTCD2Q8WV60 388 aaKnown RBP11.12□□□□□ -0.63
PTPN12-215ENST00000522115 WDR70Q9NW82 654 aa11.12□□□□□ -0.63
PTPN12-215ENST00000522115 OXER1Q8TDS5 423 aa11.1□□□□□ -0.63
PTPN12-215ENST00000522115 KDM2AQ9Y2K7 1162 aa11.1□□□□□ -0.63
PTPN12-215ENST00000522115 E2F4Q16254 413 aa11.08□□□□□ -0.64
PTPN12-215ENST00000522115 POTEGQ6S5H5 508 aa11.08□□□□□ -0.64
PTPN12-215ENST00000522115 ARIH1Q9Y4X5 557 aaPredicted RBP11.08□□□□□ -0.64
PTPN12-215ENST00000522115 GPR153Q6NV75 609 aa11.07□□□□□ -0.64
PTPN12-215ENST00000522115 ZNF710Q8N1W2 664 aa11.07□□□□□ -0.64
PTPN12-215ENST00000522115 HOXB1P14653 301 aaPredicted RBP11.06□□□□□ -0.64
PTPN12-215ENST00000522115 LCE2DQ5TA82 110 aaPredicted RBP11.06□□□□□ -0.64
PTPN12-215ENST00000522115 EMILIN3Q9NT22 766 aa11.06□□□□□ -0.64
PTPN12-215ENST00000522115 ST18O60284 1047 aa11.05□□□□□ -0.64
PTPN12-215ENST00000522115 PCDHGA4Q9Y5G9 962 aa11.05□□□□□ -0.64
PTPN12-215ENST00000522115 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
PTPN12-215ENST00000522115 TBC1D12O60347 775 aa11.03□□□□□ -0.64
PTPN12-215ENST00000522115 FAM163AQ96GL9 167 aaPredicted RBP11.03□□□□□ -0.64
PTPN12-215ENST00000522115 KDM4FA0A1W2PPD8 638 aa11.02□□□□□ -0.65
PTPN12-215ENST00000522115 P3H3Q8IVL6 736 aa11.02□□□□□ -0.65
PTPN12-215ENST00000522115 ARSIQ5FYB1 569 aa10.99□□□□□ -0.65
PTPN12-215ENST00000522115 KCNV2Q8TDN2 545 aa10.99□□□□□ -0.65
PTPN12-215ENST00000522115 ARHGEF1Q92888 912 aaKnown RBP10.99□□□□□ -0.65
PTPN12-215ENST00000522115 UPF1Q92900 1129 aaKnown RBP eCLIP10.98□□□□□ -0.65
PTPN12-215ENST00000522115 MAP3K9P80192 1104 aa10.96□□□□□ -0.65
PTPN12-215ENST00000522115 ANO8Q9HCE9 1232 aaPredicted RBP10.96□□□□□ -0.65
PTPN12-215ENST00000522115 DPYSL4O14531 572 aa10.95□□□□□ -0.66
PTPN12-215ENST00000522115 PDIA6Q15084 440 aa10.94□□□□□ -0.66
PTPN12-215ENST00000522115 ZNF316A6NFI3 1004 aaPredicted RBP10.93□□□□□ -0.66
PTPN12-215ENST00000522115 SPDYE16A6NNV3 312 aaPredicted RBP10.93□□□□□ -0.66
PTPN12-215ENST00000522115 NUDT7P0C024 238 aa10.93□□□□□ -0.66
PTPN12-215ENST00000522115 KHSRPQ92945 711 aaKnown RBP eCLIP10.93□□□□□ -0.661e-8■■■■□ 19.5
PTPN12-215ENST00000522115 EVI5O60447 810 aa10.91□□□□□ -0.66
PTPN12-215ENST00000522115 EMP3P54852 163 aa10.91□□□□□ -0.66
PTPN12-215ENST00000522115 PSDA5PKW4 1024 aaPredicted RBP10.9□□□□□ -0.66
PTPN12-215ENST00000522115 MARVELD3Q96A59 401 aa10.9□□□□□ -0.66
PTPN12-215ENST00000522115 PTGER2P43116 358 aa10.88□□□□□ -0.67
PTPN12-215ENST00000522115 PCDH10Q9P2E7 1040 aa10.88□□□□□ -0.67
PTPN12-215ENST00000522115 LHX6Q9UPM6 363 aa10.86□□□□□ -0.67
PTPN12-215ENST00000522115 ERBB3P21860 1342 aa10.84□□□□□ -0.67
PTPN12-215ENST00000522115 JPH4Q96JJ6 628 aa10.84□□□□□ -0.67
PTPN12-215ENST00000522115 FOSBP53539 338 aa10.83□□□□□ -0.68
PTPN12-215ENST00000522115 FAM205CA6NFA0 338 aa10.82□□□□□ -0.68
PTPN12-215ENST00000522115 HS3ST6Q96QI5 342 aa10.82□□□□□ -0.68
PTPN12-215ENST00000522115 VARS2Q5ST30 1063 aaKnown RBP10.81□□□□□ -0.68
PTPN12-215ENST00000522115 POTEB3A0JP26 581 aa10.8□□□□□ -0.68
PTPN12-215ENST00000522115 PHF14O94880 888 aa10.8□□□□□ -0.68
PTPN12-215ENST00000522115 POTEBQ6S5H4 581 aa10.8□□□□□ -0.68
PTPN12-215ENST00000522115 PPP4R3BQ5MIZ7 849 aa10.78□□□□□ -0.68
PTPN12-215ENST00000522115 ZNF687Q8N1G0 1237 aa10.78□□□□□ -0.68
PTPN12-215ENST00000522115 EPAS1Q99814 870 aa10.78□□□□□ -0.68
PTPN12-215ENST00000522115 PCDHGA10Q9Y5H3 936 aa10.78□□□□□ -0.68
PTPN12-215ENST00000522115 ZNF454Q8N9F8 522 aa10.77□□□□□ -0.69
PTPN12-215ENST00000522115 FBXW7Q969H0 707 aa10.77□□□□□ -0.69
PTPN12-215ENST00000522115 TESPA1A2RU30 521 aaPredicted RBP10.76□□□□□ -0.69
PTPN12-215ENST00000522115 TYW1BQ6NUM6 668 aa10.76□□□□□ -0.69
PTPN12-215ENST00000522115 PBX2P40425 430 aa10.75□□□□□ -0.69
PTPN12-215ENST00000522115 ZDHHC16Q969W1 377 aa10.75□□□□□ -0.69
PTPN12-215ENST00000522115 SEMA3EO15041 775 aa10.74□□□□□ -0.69
PTPN12-215ENST00000522115 DDX12PQ92771 950 aa10.74□□□□□ -0.69
PTPN12-215ENST00000522115 BCL2L12Q9HB09 334 aa10.74□□□□□ -0.69
PTPN12-215ENST00000522115 MLLT3P42568 568 aaPredicted RBP10.72□□□□□ -0.69
PTPN12-215ENST00000522115 OSBPP22059 807 aa10.71□□□□□ -0.69
PTPN12-215ENST00000522115 NBR1Q14596 966 aa10.7□□□□□ -0.7
PTPN12-215ENST00000522115 ADAM33Q9BZ11 813 aa10.7□□□□□ -0.7
PTPN12-215ENST00000522115 GRXCR2A6NFK2 248 aa10.69□□□□□ -0.7
PTPN12-215ENST00000522115 EN1Q05925 392 aaPredicted RBP10.69□□□□□ -0.7
PTPN12-215ENST00000522115 CDAN1Q8IWY9 1227 aa10.69□□□□□ -0.7
PTPN12-215ENST00000522115 SMYD5Q6GMV2 418 aa10.68□□□□□ -0.7
PTPN12-215ENST00000522115 POTEEQ6S8J3 1075 aa10.68□□□□□ -0.7
PTPN12-215ENST00000522115 ARHGAP33O14559 1287 aa10.67□□□□□ -0.7
PTPN12-215ENST00000522115 PTPREP23469 700 aa10.65□□□□□ -0.7
PTPN12-215ENST00000522115 PRIM1P49642 420 aaKnown RBP10.65□□□□□ -0.7
PTPN12-215ENST00000522115 KRTAP3-3Q9BYR6 98 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms