RNA–Protein interactions for RNA: ENST00000521710.1

NPM1-209, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-209ENST00000521710 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.15□□□□□ -1.42
NPM1-209ENST00000521710 GPHNQ9NQX3 736 aaPredicted RBP6.15□□□□□ -1.42
NPM1-209ENST00000521710 COLQQ9Y215 455 aaPredicted RBP6.15□□□□□ -1.42
NPM1-209ENST00000521710 DSG2Q14126 1118 aa6.14□□□□□ -1.43
NPM1-209ENST00000521710 PPP1R15BQ5SWA1 713 aa6.14□□□□□ -1.43
NPM1-209ENST00000521710 LMOD2Q6P5Q4 547 aa6.14□□□□□ -1.43
NPM1-209ENST00000521710 TMEM121BQ9BXQ6 578 aaPredicted RBP6.14□□□□□ -1.43
NPM1-209ENST00000521710 OCEL1Q9H607 264 aa6.14□□□□□ -1.43
NPM1-209ENST00000521710 TESPA1A2RU30 521 aaPredicted RBP6.13□□□□□ -1.43
NPM1-209ENST00000521710 POTEFA5A3E0 1075 aa6.13□□□□□ -1.43
NPM1-209ENST00000521710 IER5LQ5T953 404 aa6.13□□□□□ -1.43
NPM1-209ENST00000521710 EMILIN3Q9NT22 766 aa6.12□□□□□ -1.43
NPM1-209ENST00000521710 BOLA1Q9Y3E2 137 aa6.12□□□□□ -1.43
NPM1-209ENST00000521710 KIF3CO14782 793 aa6.11□□□□□ -1.43
NPM1-209ENST00000521710 TMEM92Q6UXU6 159 aa6.11□□□□□ -1.43
NPM1-209ENST00000521710 ARIH1Q9Y4X5 557 aaPredicted RBP6.11□□□□□ -1.43
NPM1-209ENST00000521710 C2orf72A6NCS6 295 aa6.1□□□□□ -1.43
NPM1-209ENST00000521710 C7P10643 843 aa6.1□□□□□ -1.43
NPM1-209ENST00000521710 PLCG2P16885 1265 aa6.1□□□□□ -1.43
NPM1-209ENST00000521710 LHX8Q68G74 356 aa6.1□□□□□ -1.43
NPM1-209ENST00000521710 SLC39A7Q92504 469 aa6.1□□□□□ -1.43
NPM1-209ENST00000521710 DPYSL4O14531 572 aa6.09□□□□□ -1.43
NPM1-209ENST00000521710 MLLT3P42568 568 aaPredicted RBP6.09□□□□□ -1.43
NPM1-209ENST00000521710 FOXK1P85037 733 aa6.09□□□□□ -1.43
NPM1-209ENST00000521710 TMC2Q8TDI7 906 aa6.08□□□□□ -1.44
NPM1-209ENST00000521710 METRNQ9UJH8 293 aa6.08□□□□□ -1.44
NPM1-209ENST00000521710 POTEB2H3BUK9 544 aa6.07□□□□□ -1.44
NPM1-209ENST00000521710 PLPP6Q8IY26 295 aa6.07□□□□□ -1.44
NPM1-209ENST00000521710 ZC3H15Q8WU90 426 aaKnown RBP6.07□□□□□ -1.44
NPM1-209ENST00000521710 SEC24BO95487 1268 aa6.06□□□□□ -1.44
NPM1-209ENST00000521710 RBM26Q5T8P6 1007 aaKnown RBP6.05□□□□□ -1.44
NPM1-209ENST00000521710 PDIA6Q15084 440 aa6.04□□□□□ -1.44
NPM1-209ENST00000521710 POTEJP0CG39 1038 aa6.03□□□□□ -1.44
NPM1-209ENST00000521710 L3MBTL3Q96JM7 780 aaPredicted RBP6.03□□□□□ -1.44
NPM1-209ENST00000521710 G3V3G9 751 aa6.02□□□□□ -1.45
NPM1-209ENST00000521710 UPF1Q92900 1129 aaKnown RBP eCLIP6.02□□□□□ -1.45
NPM1-209ENST00000521710 TULP1O00294 542 aaPredicted RBP6.01□□□□□ -1.45
NPM1-209ENST00000521710 SLC24A3Q9HC58 644 aa6.01□□□□□ -1.45
NPM1-209ENST00000521710 ZMYND10O75800 440 aa6□□□□□ -1.45
NPM1-209ENST00000521710 OTUD5Q96G74 571 aa6□□□□□ -1.45
NPM1-209ENST00000521710 SMYD5Q6GMV2 418 aa5.99□□□□□ -1.45
NPM1-209ENST00000521710 OXER1Q8TDS5 423 aa5.99□□□□□ -1.45
NPM1-209ENST00000521710 SPDYE16A6NNV3 312 aaPredicted RBP5.98□□□□□ -1.45
NPM1-209ENST00000521710 PRIM1P49642 420 aaKnown RBP5.98□□□□□ -1.45
NPM1-209ENST00000521710 GPR37O15354 613 aa5.97□□□□□ -1.45
NPM1-209ENST00000521710 BRPF1P55201 1214 aaPredicted RBP5.97□□□□□ -1.45
NPM1-209ENST00000521710 MAP3K9P80192 1104 aa5.97□□□□□ -1.45
NPM1-209ENST00000521710 GRXCR2A6NFK2 248 aa5.96□□□□□ -1.46
NPM1-209ENST00000521710 C3orf67Q6ZVT6 689 aa5.96□□□□□ -1.46
NPM1-209ENST00000521710 GPIHBP1Q8IV16 184 aa5.96□□□□□ -1.46
NPM1-209ENST00000521710 OSBPP22059 807 aa5.95□□□□□ -1.46
NPM1-209ENST00000521710 MAMSTRQ6ZN01 415 aa5.95□□□□□ -1.46
NPM1-209ENST00000521710 BARGINQ6ZT62 677 aa5.95□□□□□ -1.46
NPM1-209ENST00000521710 DDX12PQ92771 950 aa5.95□□□□□ -1.46
NPM1-209ENST00000521710 PTCD2Q8WV60 388 aaKnown RBP5.94□□□□□ -1.46
NPM1-209ENST00000521710 PLSCR2Q9NRY7 297 aa5.94□□□□□ -1.46
NPM1-209ENST00000521710 EVI5O60447 810 aa5.93□□□□□ -1.46
NPM1-209ENST00000521710 PTGER2P43116 358 aa5.92□□□□□ -1.46
NPM1-209ENST00000521710 SCUBE2Q9NQ36 999 aa5.91□□□□□ -1.46
NPM1-209ENST00000521710 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.91□□□□□ -1.46
NPM1-209ENST00000521710 SLC34A2O95436 690 aa5.9□□□□□ -1.46
NPM1-209ENST00000521710 FECHP22830 423 aa5.9□□□□□ -1.46
NPM1-209ENST00000521710 NEUROD2Q15784 382 aa5.9□□□□□ -1.46
NPM1-209ENST00000521710 KDM4FA0A1W2PPD8 638 aa5.89□□□□□ -1.47
NPM1-209ENST00000521710 NUTM2FA1L443 756 aa5.89□□□□□ -1.47
NPM1-209ENST00000521710 ANO8Q9HCE9 1232 aaPredicted RBP5.89□□□□□ -1.47
NPM1-209ENST00000521710 PCDHGA4Q9Y5G9 962 aa5.89□□□□□ -1.47
NPM1-209ENST00000521710 TBC1D12O60347 775 aa5.88□□□□□ -1.47
NPM1-209ENST00000521710 TMEM132AQ24JP5 1023 aa5.88□□□□□ -1.47
NPM1-209ENST00000521710 KHSRPQ92945 711 aaKnown RBP eCLIP5.88□□□□□ -1.471e-8■■□□□ 11.9
NPM1-209ENST00000521710 GPBP1L1Q9HC44 474 aaPredicted RBP5.88□□□□□ -1.47
NPM1-209ENST00000521710 HOXB3P14651 431 aaPredicted RBP5.87□□□□□ -1.47
NPM1-209ENST00000521710 KRI1Q8N9T8 703 aaKnown RBP5.87□□□□□ -1.47
NPM1-209ENST00000521710 AK7Q96M32 723 aa5.87□□□□□ -1.47
NPM1-209ENST00000521710 CDHR5Q9HBB8 845 aa5.87□□□□□ -1.47
NPM1-209ENST00000521710 TRIM66O15016 1216 aa5.86□□□□□ -1.47
NPM1-209ENST00000521710 PTGDRQ13258 359 aa5.86□□□□□ -1.47
NPM1-209ENST00000521710 PCDHGA10Q9Y5H3 936 aa5.86□□□□□ -1.47
NPM1-209ENST00000521710 TSR1Q2NL82 804 aaKnown RBP5.85□□□□□ -1.47
NPM1-209ENST00000521710 CCDC102AQ96A19 550 aa5.85□□□□□ -1.47
NPM1-209ENST00000521710 NPDC1Q9NQX5 325 aaPredicted RBP5.85□□□□□ -1.47
NPM1-209ENST00000521710 GNPATO15228 680 aa5.84□□□□□ -1.47
NPM1-209ENST00000521710 EN1Q05925 392 aaPredicted RBP5.84□□□□□ -1.47
NPM1-209ENST00000521710 RBM33Q96EV2 1170 aaKnown RBP5.84□□□□□ -1.47
NPM1-209ENST00000521710 IRF6O14896 467 aa5.83□□□□□ -1.48
NPM1-209ENST00000521710 FCHSD2O94868 740 aa5.83□□□□□ -1.48
NPM1-209ENST00000521710 PHF14O94880 888 aa5.83□□□□□ -1.48
NPM1-209ENST00000521710 PDE4DQ08499 809 aa5.83□□□□□ -1.48
NPM1-209ENST00000521710 MAP2K5Q13163 448 aa5.83□□□□□ -1.48
NPM1-209ENST00000521710 ARSIQ5FYB1 569 aa5.83□□□□□ -1.48
NPM1-209ENST00000521710 SLAIN1Q8ND83 568 aa5.83□□□□□ -1.48
NPM1-209ENST00000521710 GTF3C3Q9Y5Q9 886 aa5.83□□□□□ -1.48
NPM1-209ENST00000521710 ZNF316A6NFI3 1004 aaPredicted RBP5.82□□□□□ -1.48
NPM1-209ENST00000521710 NUDT7P0C024 238 aa5.82□□□□□ -1.48
NPM1-209ENST00000521710 HIC1Q14526 733 aa5.82□□□□□ -1.48
NPM1-209ENST00000521710 KDM4CQ9H3R0 1056 aa5.82□□□□□ -1.48
NPM1-209ENST00000521710 TIMELESSQ9UNS1 1208 aa5.82□□□□□ -1.48
NPM1-209ENST00000521710 MINK1Q8N4C8 1332 aaPredicted RBP5.81□□□□□ -1.48
NPM1-209ENST00000521710 MAP3K7O43318 606 aa5.81□□□□□ -1.48
NPM1-209ENST00000521710 LCE2DQ5TA82 110 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms