RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 ITSN2Q9NZM3 1697 aa15.12■□□□□ 0.01
CLK4-209ENST00000521621 SUPT6HQ7KZ85 1726 aaKnown RBP15.11■□□□□ 0.01
CLK4-209ENST00000521621 DENND4BO75064 1496 aaPredicted RBP15.1■□□□□ 0.01
CLK4-209ENST00000521621 KDM5CP41229 1560 aa15.09■□□□□ 0.01
CLK4-209ENST00000521621 ABCC1P33527 1531 aa15.08■□□□□ 0
CLK4-209ENST00000521621 GPATCH8Q9UKJ3 1502 aaKnown RBP15.08■□□□□ 0
CLK4-209ENST00000521621 POGZQ7Z3K3 1410 aa15.07■□□□□ 0
CLK4-209ENST00000521621 LRRC9Q6ZRR7 1453 aa15.07■□□□□ 0
CLK4-209ENST00000521621 PLEKHH2Q8IVE3 1493 aa15.07■□□□□ 0
CLK4-209ENST00000521621 EFCAB2Q5VUJ9 269 aa15.07■□□□□ 0
CLK4-209ENST00000521621 ARHGAP5Q13017 1502 aa15.07■□□□□ 0
CLK4-209ENST00000521621 ARHGEF40Q8TER5 1519 aa15.07■□□□□ 0
CLK4-209ENST00000521621 ADGRL1O94910 1474 aa15.06■□□□□ 0
CLK4-209ENST00000521621 ATP1B4Q9UN42 357 aaPredicted RBP15.06■□□□□ 0
CLK4-209ENST00000521621 KIAA1107Q9UPP5 1409 aa15.05■□□□□ 0
CLK4-209ENST00000521621 REREQ9P2R6 1566 aa15.05■□□□□ 0
CLK4-209ENST00000521621 MTUS2Q5JR59 1369 aa15.05■□□□□ -0
CLK4-209ENST00000521621 ZNF518AQ6AHZ1 1483 aa15.04■□□□□ -0
CLK4-209ENST00000521621 SAMD9LQ8IVG5 1584 aa15.03■□□□□ -0
CLK4-209ENST00000521621 NCOA2Q15596 1464 aa15.01□□□□□ -0.01
CLK4-209ENST00000521621 MLH3Q9UHC1 1453 aa15.01□□□□□ -0.01
CLK4-209ENST00000521621 SCAPERQ9BY12 1400 aa15.01□□□□□ -0.01
CLK4-209ENST00000521621 ZFYVE16Q7Z3T8 1539 aa15□□□□□ -0.01
CLK4-209ENST00000521621 CCNB3Q8WWL7 1395 aa15□□□□□ -0.01
CLK4-209ENST00000521621 HECW2Q9P2P5 1572 aa15□□□□□ -0.01
CLK4-209ENST00000521621 MIA2Q96PC5 1412 aa14.98□□□□□ -0.01
CLK4-209ENST00000521621 ARHGEF5Q12774 1597 aa14.97□□□□□ -0.01
CLK4-209ENST00000521621 ARHGEF12Q9NZN5 1544 aa14.97□□□□□ -0.01
CLK4-209ENST00000521621 INO80Q9ULG1 1556 aaPredicted RBP14.96□□□□□ -0.02
CLK4-209ENST00000521621 ADAMTSL3P82987 1691 aa14.94□□□□□ -0.02
CLK4-209ENST00000521621 AGLP35573 1532 aa14.94□□□□□ -0.02
CLK4-209ENST00000521621 ATP10AO60312 1499 aa14.94□□□□□ -0.02
CLK4-209ENST00000521621 MBD5Q9P267 1494 aa14.94□□□□□ -0.02
CLK4-209ENST00000521621 BCORL1Q5H9F3 1711 aa14.94□□□□□ -0.02
CLK4-209ENST00000521621 DIP2CQ9Y2E4 1556 aa14.93□□□□□ -0.02
CLK4-209ENST00000521621 SYCP2Q9BX26 1530 aa14.93□□□□□ -0.02
CLK4-209ENST00000521621 KIDINS220Q9ULH0 1771 aa14.93□□□□□ -0.02
CLK4-209ENST00000521621 RTEL1-TNFRSF6BF6WH68 1400 aa14.93□□□□□ -0.02
CLK4-209ENST00000521621 MAST1Q9Y2H9 1570 aa14.93□□□□□ -0.02
CLK4-209ENST00000521621 RAPGEF3O95398 923 aa14.92□□□□□ -0.02
CLK4-209ENST00000521621 RSPH4AQ5TD94 716 aa14.92□□□□□ -0.02
CLK4-209ENST00000521621 MYOM3Q5VTT5 1437 aa14.92□□□□□ -0.02
CLK4-209ENST00000521621 C9orf84Q5VXU9 1444 aa14.92□□□□□ -0.02
CLK4-209ENST00000521621 TRAPPC8Q9Y2L5 1435 aa14.91□□□□□ -0.02
CLK4-209ENST00000521621 ABCA6Q8N139 1617 aa14.91□□□□□ -0.02
CLK4-209ENST00000521621 CFDP1Q9UEE9 299 aaPredicted RBP14.9□□□□□ -0.02
CLK4-209ENST00000521621 CAMSAP2Q08AD1 1489 aa14.9□□□□□ -0.02
CLK4-209ENST00000521621 TCOF1Q13428 1488 aaKnown RBP14.9□□□□□ -0.02
CLK4-209ENST00000521621 ADGBQ8N7X0 1667 aa14.9□□□□□ -0.02
CLK4-209ENST00000521621 PLXNC1O60486 1568 aa14.89□□□□□ -0.03
CLK4-209ENST00000521621 ATP7AQ04656 1500 aa14.88□□□□□ -0.03
CLK4-209ENST00000521621 SIGLEC1Q9BZZ2 1709 aa14.88□□□□□ -0.03
CLK4-209ENST00000521621 YEATS2Q9ULM3 1422 aa14.88□□□□□ -0.03
CLK4-209ENST00000521621 CCDC141Q6ZP82 1450 aa14.87□□□□□ -0.03
CLK4-209ENST00000521621 KANK4Q5T7N3 995 aaPredicted RBP14.86□□□□□ -0.03
CLK4-209ENST00000521621 APLP2Q06481 763 aa14.86□□□□□ -0.03
CLK4-209ENST00000521621 FAM135AQ9P2D6 1515 aa14.85□□□□□ -0.03
CLK4-209ENST00000521621 CROCC2H7BZ55 1655 aa14.85□□□□□ -0.03
CLK4-209ENST00000521621 SHANK2Q9UPX8 1470 aa14.85□□□□□ -0.03
CLK4-209ENST00000521621 KDM4FA0A1W2PPD8 638 aa14.85□□□□□ -0.03
CLK4-209ENST00000521621 PTPN23Q9H3S7 1636 aa14.84□□□□□ -0.03
CLK4-209ENST00000521621 AFAP1Q8N556 730 aa14.82□□□□□ -0.04
CLK4-209ENST00000521621 DNMT1P26358 1616 aaKnown RBP14.81□□□□□ -0.04
CLK4-209ENST00000521621 FGD6Q6ZV73 1430 aa14.81□□□□□ -0.04
CLK4-209ENST00000521621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.8□□□□□ -0.04
CLK4-209ENST00000521621 MROH2AA6NES4 1674 aa14.8□□□□□ -0.04
CLK4-209ENST00000521621 EIF2AK4Q9P2K8 1649 aaKnown RBP14.79□□□□□ -0.04
CLK4-209ENST00000521621 SPAG9O60271 1321 aaKnown RBP14.79□□□□□ -0.04
CLK4-209ENST00000521621 MADDQ8WXG6 1647 aa14.79□□□□□ -0.04
CLK4-209ENST00000521621 FER1L4A9Z1Z3 1794 aa14.78□□□□□ -0.04
CLK4-209ENST00000521621 A2MP01023 1474 aa14.78□□□□□ -0.04
CLK4-209ENST00000521621 HNRNPMP52272 730 aaKnown RBP eCLIP14.78□□□□□ -0.04
CLK4-209ENST00000521621 ZNF644Q9H582 1327 aaPredicted RBP14.76□□□□□ -0.05
CLK4-209ENST00000521621 PPP6R1Q9UPN7 881 aa14.76□□□□□ -0.05
CLK4-209ENST00000521621 ZNF777Q9ULD5 760 aaPredicted RBP14.75□□□□□ -0.05
CLK4-209ENST00000521621 PTPRMP28827 1452 aa14.75□□□□□ -0.05
CLK4-209ENST00000521621 RNF17Q9BXT8 1623 aaKnown RBP14.75□□□□□ -0.05
CLK4-209ENST00000521621 CNTLNQ9NXG0 1405 aa14.75□□□□□ -0.05
CLK4-209ENST00000521621 ADGRL2O95490 1459 aa14.74□□□□□ -0.05
CLK4-209ENST00000521621 DHX29Q7Z478 1369 aaKnown RBP14.74□□□□□ -0.05
CLK4-209ENST00000521621 RIMS1Q86UR5 1692 aaKnown RBP14.73□□□□□ -0.05
CLK4-209ENST00000521621 ABCC5O15440 1437 aa14.73□□□□□ -0.05
CLK4-209ENST00000521621 DAPK1P53355 1430 aa14.73□□□□□ -0.05
CLK4-209ENST00000521621 DUOX2Q9NRD8 1548 aa14.72□□□□□ -0.05
CLK4-209ENST00000521621 ZC3H13Q5T200 1668 aaKnown RBP14.71□□□□□ -0.06
CLK4-209ENST00000521621 KDM5DQ9BY66 1539 aa14.7□□□□□ -0.06
CLK4-209ENST00000521621 AEBP2Q6ZN18 517 aaPredicted RBP14.69□□□□□ -0.06
CLK4-209ENST00000521621 ERBINQ96RT1 1412 aa14.69□□□□□ -0.06
CLK4-209ENST00000521621 TSPY4P0CV99 314 aa14.69□□□□□ -0.06
CLK4-209ENST00000521621 TSPY10P0CW01 314 aa14.69□□□□□ -0.06
CLK4-209ENST00000521621 RRBP1Q9P2E9 1410 aaKnown RBP14.68□□□□□ -0.06
CLK4-209ENST00000521621 DEPDC5O75140 1603 aa14.68□□□□□ -0.06
CLK4-209ENST00000521621 C3P01024 1663 aa14.66□□□□□ -0.06
CLK4-209ENST00000521621 ARID4BQ4LE39 1312 aaPredicted RBP14.66□□□□□ -0.06
CLK4-209ENST00000521621 ROCK1Q13464 1354 aa14.66□□□□□ -0.06
CLK4-209ENST00000521621 NPATQ14207 1427 aa14.65□□□□□ -0.06
CLK4-209ENST00000521621 PREX1Q8TCU6 1659 aa14.64□□□□□ -0.07
CLK4-209ENST00000521621 MROH1Q8NDA8 1641 aa14.64□□□□□ -0.07
CLK4-209ENST00000521621 PRDM15P57071 1507 aaPredicted RBP14.64□□□□□ -0.07
CLK4-209ENST00000521621 NCOA1Q15788 1441 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms