RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 CDK11AQ9UQ88 783 aaPredicted RBP27.31■■□□□ 1.96
TRAM1-204ENST00000521049 CDK13Q14004 1512 aaKnown RBP27.31■■□□□ 1.96
TRAM1-204ENST00000521049 ATP1B4Q9UN42 357 aaPredicted RBP27.29■■□□□ 1.96
TRAM1-204ENST00000521049 UBTFP17480 764 aaKnown RBP27.28■■□□□ 1.96
TRAM1-204ENST00000521049 HECW1Q76N89 1606 aa27.27■■□□□ 1.96
TRAM1-204ENST00000521049 FMN1Q68DA7 1419 aa27.26■■□□□ 1.95
TRAM1-204ENST00000521049 ATP10AO60312 1499 aa27.25■■□□□ 1.95
TRAM1-204ENST00000521049 SIGLEC1Q9BZZ2 1709 aa27.2■■□□□ 1.94
TRAM1-204ENST00000521049 C9orf84Q5VXU9 1444 aa27.18■■□□□ 1.94
TRAM1-204ENST00000521049 CERKQ8TCT0 537 aa27.18■■□□□ 1.94
TRAM1-204ENST00000521049 EHMT2Q96KQ7 1210 aa27.18■■□□□ 1.94
TRAM1-204ENST00000521049 ARHGAP35Q9NRY4 1499 aa27.16■■□□□ 1.94
TRAM1-204ENST00000521049 ARHGEF12Q9NZN5 1544 aa27.16■■□□□ 1.94
TRAM1-204ENST00000521049 AFAP1Q8N556 730 aa27.15■■□□□ 1.94
TRAM1-204ENST00000521049 TROQ12816 1431 aaPredicted RBP27.13■■□□□ 1.93
TRAM1-204ENST00000521049 ZNF518AQ6AHZ1 1483 aa27.13■■□□□ 1.93
TRAM1-204ENST00000521049 CEBPAP49715 358 aaPredicted RBP27.12■■□□□ 1.93
TRAM1-204ENST00000521049 FER1L4A9Z1Z3 1794 aa27.09■■□□□ 1.93
TRAM1-204ENST00000521049 CLIP1P30622 1438 aa27.09■■□□□ 1.93
TRAM1-204ENST00000521049 MYT1LQ9UL68 1186 aa27.08■■□□□ 1.93
TRAM1-204ENST00000521049 DMRT2Q9Y5R5 561 aa27.08■■□□□ 1.93
TRAM1-204ENST00000521049 MYO5CQ9NQX4 1742 aa27.07■■□□□ 1.92
TRAM1-204ENST00000521049 ARHGAP5Q13017 1502 aa27.06■■□□□ 1.92
TRAM1-204ENST00000521049 KIF14Q15058 1648 aa27.05■■□□□ 1.92
TRAM1-204ENST00000521049 KDM5CP41229 1560 aa27.03■■□□□ 1.92
TRAM1-204ENST00000521049 MLH3Q9UHC1 1453 aa27■■□□□ 1.91
TRAM1-204ENST00000521049 UHRF1BP1Q6BDS2 1440 aa26.98■■□□□ 1.91
TRAM1-204ENST00000521049 PREX1Q8TCU6 1659 aa26.97■■□□□ 1.91
TRAM1-204ENST00000521049 REREQ9P2R6 1566 aa26.96■■□□□ 1.91
TRAM1-204ENST00000521049 ESF1Q9H501 851 aaKnown RBP26.95■■□□□ 1.9
TRAM1-204ENST00000521049 DIP2CQ9Y2E4 1556 aa26.94■■□□□ 1.9
TRAM1-204ENST00000521049 TRAPPC8Q9Y2L5 1435 aa26.94■■□□□ 1.9
TRAM1-204ENST00000521049 CASKIN1Q8WXD9 1431 aa26.92■■□□□ 1.9
TRAM1-204ENST00000521049 SETD1BQ9UPS6 1966 aaKnown RBP26.91■■□□□ 1.9
TRAM1-204ENST00000521049 AGLP35573 1532 aa26.91■■□□□ 1.9
TRAM1-204ENST00000521049 CCDC18Q5T9S5 1454 aa26.89■■□□□ 1.9
TRAM1-204ENST00000521049 CDC42BPBQ9Y5S2 1711 aa26.87■■□□□ 1.89
TRAM1-204ENST00000521049 PTPRTO14522 1441 aa26.87■■□□□ 1.89
TRAM1-204ENST00000521049 ABCC1P33527 1531 aa26.85■■□□□ 1.89
TRAM1-204ENST00000521049 STRCQ7RTU9 1775 aa26.85■■□□□ 1.89
TRAM1-204ENST00000521049 ABCA6Q8N139 1617 aa26.85■■□□□ 1.89
TRAM1-204ENST00000521049 LRRIQ1Q96JM4 1722 aa26.85■■□□□ 1.89
TRAM1-204ENST00000521049 CNTLNQ9NXG0 1405 aa26.83■■□□□ 1.89
TRAM1-204ENST00000521049 PREX2Q70Z35 1606 aa26.83■■□□□ 1.88
TRAM1-204ENST00000521049 ZNF777Q9ULD5 760 aaPredicted RBP26.8■■□□□ 1.88
TRAM1-204ENST00000521049 C3P01024 1663 aa26.78■■□□□ 1.88
TRAM1-204ENST00000521049 SPAG9O60271 1321 aaKnown RBP26.76■■□□□ 1.87
TRAM1-204ENST00000521049 ITSN2Q9NZM3 1697 aa26.76■■□□□ 1.87
TRAM1-204ENST00000521049 HNRNPMP52272 730 aaKnown RBP eCLIP26.75■■□□□ 1.87
TRAM1-204ENST00000521049 KIDINS220Q9ULH0 1771 aa26.75■■□□□ 1.87
TRAM1-204ENST00000521049 FYCO1Q9BQS8 1478 aa26.74■■□□□ 1.87
TRAM1-204ENST00000521049 ZMYM3Q14202 1370 aa26.73■■□□□ 1.87
TRAM1-204ENST00000521049 GPATCH8Q9UKJ3 1502 aaKnown RBP26.73■■□□□ 1.87
TRAM1-204ENST00000521049 NPATQ14207 1427 aa26.73■■□□□ 1.87
TRAM1-204ENST00000521049 NCOA1Q15788 1441 aa26.72■■□□□ 1.87
TRAM1-204ENST00000521049 SAMD9LQ8IVG5 1584 aa26.71■■□□□ 1.87
TRAM1-204ENST00000521049 DISP3Q9P2K9 1392 aa26.71■■□□□ 1.87
TRAM1-204ENST00000521049 CFDP1Q9UEE9 299 aaPredicted RBP26.7■■□□□ 1.86
TRAM1-204ENST00000521049 KIAA1107Q9UPP5 1409 aa26.7■■□□□ 1.86
TRAM1-204ENST00000521049 CDC42BPAQ5VT25 1732 aa26.7■■□□□ 1.86
TRAM1-204ENST00000521049 LTBP4Q8N2S1 1624 aa26.67■■□□□ 1.86
TRAM1-204ENST00000521049 ILDR2Q71H61 639 aa26.65■■□□□ 1.86
TRAM1-204ENST00000521049 IQSEC2Q5JU85 1478 aa26.65■■□□□ 1.86
TRAM1-204ENST00000521049 PLEKHH2Q8IVE3 1493 aa26.65■■□□□ 1.86
TRAM1-204ENST00000521049 SYCP2Q9BX26 1530 aa26.65■■□□□ 1.86
TRAM1-204ENST00000521049 PPP6R1Q9UPN7 881 aa26.64■■□□□ 1.86
TRAM1-204ENST00000521049 CCNB3Q8WWL7 1395 aa26.63■■□□□ 1.85
TRAM1-204ENST00000521049 NCKAP5LQ9HCH0 1330 aa26.62■■□□□ 1.85
TRAM1-204ENST00000521049 GGT6Q6P531 493 aa26.61■■□□□ 1.85
TRAM1-204ENST00000521049 A2MP01023 1474 aa26.61■■□□□ 1.85
TRAM1-204ENST00000521049 MROH2AA6NES4 1674 aa26.6■■□□□ 1.85
TRAM1-204ENST00000521049 PKD2Q13563 968 aa26.6■■□□□ 1.85
TRAM1-204ENST00000521049 CAMSAP1Q5T5Y3 1602 aa26.6■■□□□ 1.85
TRAM1-204ENST00000521049 SOCS7O14512 581 aa26.59■■□□□ 1.85
TRAM1-204ENST00000521049 ATP7AQ04656 1500 aa26.59■■□□□ 1.85
TRAM1-204ENST00000521049 MTUS2Q5JR59 1369 aa26.57■■□□□ 1.84
TRAM1-204ENST00000521049 PTPRKQ15262 1439 aa26.56■■□□□ 1.84
TRAM1-204ENST00000521049 PLXNC1O60486 1568 aa26.54■■□□□ 1.84
TRAM1-204ENST00000521049 SUPT6HQ7KZ85 1726 aaKnown RBP26.53■■□□□ 1.84
TRAM1-204ENST00000521049 PLA2R1Q13018 1463 aa26.53■■□□□ 1.84
TRAM1-204ENST00000521049 ZNF335Q9H4Z2 1342 aaPredicted RBP26.52■■□□□ 1.84
TRAM1-204ENST00000521049 ZNF644Q9H582 1327 aaPredicted RBP26.52■■□□□ 1.84
TRAM1-204ENST00000521049 INO80Q9ULG1 1556 aaPredicted RBP26.52■■□□□ 1.84
TRAM1-204ENST00000521049 TCOF1Q13428 1488 aaKnown RBP26.48■■□□□ 1.83
TRAM1-204ENST00000521049 MBD5Q9P267 1494 aa26.48■■□□□ 1.83
TRAM1-204ENST00000521049 RTEL1-TNFRSF6BF6WH68 1400 aa26.48■■□□□ 1.83
TRAM1-204ENST00000521049 CLTCQ00610 1675 aaKnown RBP26.47■■□□□ 1.83
TRAM1-204ENST00000521049 UBAP1LF5GYI3 381 aa26.47■■□□□ 1.83
TRAM1-204ENST00000521049 DHX29Q7Z478 1369 aaKnown RBP26.46■■□□□ 1.83
TRAM1-204ENST00000521049 CEP170BQ9Y4F5 1589 aaPredicted RBP26.44■■□□□ 1.82
TRAM1-204ENST00000521049 RSPH4AQ5TD94 716 aa26.42■■□□□ 1.82
TRAM1-204ENST00000521049 MYO3AQ8NEV4 1616 aa26.42■■□□□ 1.82
TRAM1-204ENST00000521049 SPATA31D1Q6ZQQ2 1576 aa26.41■■□□□ 1.82
TRAM1-204ENST00000521049 ZNF142P52746 1687 aaPredicted RBP26.41■■□□□ 1.82
TRAM1-204ENST00000521049 CEP162Q5TB80 1403 aa26.4■■□□□ 1.82
TRAM1-204ENST00000521049 A2ML1A8K2U0 1454 aa26.4■■□□□ 1.82
TRAM1-204ENST00000521049 ADGBQ8N7X0 1667 aa26.39■■□□□ 1.82
TRAM1-204ENST00000521049 KIF3BO15066 747 aa26.39■■□□□ 1.82
TRAM1-204ENST00000521049 TIAM1Q13009 1591 aa26.38■■□□□ 1.81
TRAM1-204ENST00000521049 EHBP1L1Q8N3D4 1523 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 270.7 ms