RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 KIF14Q15058 1648 aa36.89■■■■□ 3.5
COL13A1-213ENST00000520267 TRIM52Q96A61 297 aa36.88■■■■□ 3.49
COL13A1-213ENST00000520267 ABCA8O94911 1581 aa36.88■■■■□ 3.49
COL13A1-213ENST00000520267 ROCK1Q13464 1354 aa36.87■■■■□ 3.49
COL13A1-213ENST00000520267 ITSN2Q9NZM3 1697 aa36.86■■■■□ 3.49
COL13A1-213ENST00000520267 GPATCH8Q9UKJ3 1502 aaKnown RBP36.82■■■■□ 3.48
COL13A1-213ENST00000520267 CAMSAP2Q08AD1 1489 aa36.8■■■■□ 3.48
COL13A1-213ENST00000520267 CFDP1Q9UEE9 299 aaPredicted RBP36.78■■■■□ 3.48
COL13A1-213ENST00000520267 KDM5BQ9UGL1 1544 aa36.78■■■■□ 3.48
COL13A1-213ENST00000520267 MPHOSPH9Q99550 1183 aa36.77■■■■□ 3.48
COL13A1-213ENST00000520267 CHD1O14646 1710 aa36.76■■■■□ 3.48
COL13A1-213ENST00000520267 ATP10BO94823 1461 aa36.75■■■■□ 3.47
COL13A1-213ENST00000520267 HIRIP3Q9BW71 556 aaPredicted RBP36.73■■■■□ 3.47
COL13A1-213ENST00000520267 PLEKHD1A6NEE1 506 aa36.7■■■■□ 3.47
COL13A1-213ENST00000520267 DDX10Q13206 875 aaKnown RBP36.69■■■■□ 3.46
COL13A1-213ENST00000520267 ZNF777Q9ULD5 760 aaPredicted RBP36.67■■■■□ 3.46
COL13A1-213ENST00000520267 CDC42BPAQ5VT25 1732 aa36.66■■■■□ 3.46
COL13A1-213ENST00000520267 ADGBQ8N7X0 1667 aa36.65■■■■□ 3.46
COL13A1-213ENST00000520267 CROCC2H7BZ55 1655 aa36.65■■■■□ 3.46
COL13A1-213ENST00000520267 PTPRGP23470 1445 aa36.64■■■■□ 3.46
COL13A1-213ENST00000520267 ABCC10Q5T3U5 1492 aa36.63■■■■□ 3.46
COL13A1-213ENST00000520267 FOXD1Q16676 465 aa36.62■■■■□ 3.45
COL13A1-213ENST00000520267 NCOA1Q15788 1441 aa36.59■■■■□ 3.45
COL13A1-213ENST00000520267 ADGRL2O95490 1459 aa36.56■■■■□ 3.44
COL13A1-213ENST00000520267 SHROOM2Q13796 1616 aa36.54■■■■□ 3.44
COL13A1-213ENST00000520267 ANKRD30BQ9BXX2 1392 aa36.53■■■■□ 3.44
COL13A1-213ENST00000520267 SLC4A1APQ9BWU0 796 aaKnown RBP36.49■■■■□ 3.43
COL13A1-213ENST00000520267 PZPP20742 1482 aa36.47■■■■□ 3.43
COL13A1-213ENST00000520267 KCNH8Q96L42 1107 aa36.47■■■■□ 3.43
COL13A1-213ENST00000520267 ANKRD30AQ9BXX3 1397 aa36.46■■■■□ 3.43
COL13A1-213ENST00000520267 L3MBTL2Q969R5 705 aa36.45■■■■□ 3.43
COL13A1-213ENST00000520267 RPRD2Q5VT52 1461 aaKnown RBP36.45■■■■□ 3.43
COL13A1-213ENST00000520267 ERCC6L2Q5T890 1561 aa36.4■■■■□ 3.42
COL13A1-213ENST00000520267 SHANK2Q9UPX8 1470 aa36.39■■■■□ 3.42
COL13A1-213ENST00000520267 C9orf84Q5VXU9 1444 aa36.36■■■■□ 3.41
COL13A1-213ENST00000520267 TEX14Q8IWB6 1497 aa36.35■■■■□ 3.41
COL13A1-213ENST00000520267 ANKRD50Q9ULJ7 1429 aa36.34■■■■□ 3.41
COL13A1-213ENST00000520267 CDC42BPBQ9Y5S2 1711 aa36.34■■■■□ 3.41
COL13A1-213ENST00000520267 HSPA5P11021 654 aaKnown RBP36.33■■■■□ 3.41
COL13A1-213ENST00000520267 PREX2Q70Z35 1606 aa36.32■■■■□ 3.4
COL13A1-213ENST00000520267 ARHGEF5Q12774 1597 aa36.3■■■■□ 3.4
COL13A1-213ENST00000520267 HNRNPMP52272 730 aaKnown RBP eCLIP36.29■■■■□ 3.4
COL13A1-213ENST00000520267 SAMD9LQ8IVG5 1584 aa36.29■■■■□ 3.4
COL13A1-213ENST00000520267 MBD5Q9P267 1494 aa36.28■■■■□ 3.4
COL13A1-213ENST00000520267 KIAA1107Q9UPP5 1409 aa36.27■■■■□ 3.4
COL13A1-213ENST00000520267 TSPY4P0CV99 314 aa36.27■■■■□ 3.4
COL13A1-213ENST00000520267 TSPY10P0CW01 314 aa36.27■■■■□ 3.4
COL13A1-213ENST00000520267 ANP32CO43423 234 aa36.26■■■■□ 3.4
COL13A1-213ENST00000520267 ABCC2Q92887 1545 aa36.26■■■■□ 3.39
COL13A1-213ENST00000520267 EIF4G2P78344 907 aaKnown RBP eCLIP36.24■■■■□ 3.39
COL13A1-213ENST00000520267 NBPF8Q3BBV2 869 aa36.24■■■■□ 3.39
COL13A1-213ENST00000520267 PELP1Q8IZL8 1130 aaKnown RBP36.24■■■■□ 3.39
COL13A1-213ENST00000520267 TTC37Q6PGP7 1564 aa36.22■■■■□ 3.39
COL13A1-213ENST00000520267 PKD2Q13563 968 aa36.22■■■■□ 3.39
COL13A1-213ENST00000520267 CLASP1Q7Z460 1538 aa36.22■■■■□ 3.39
COL13A1-213ENST00000520267 CCER2I3L3R5 266 aa36.19■■■■□ 3.38
COL13A1-213ENST00000520267 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.19■■■■□ 3.38
COL13A1-213ENST00000520267 WASHC2AQ641Q2 1341 aa36.19■■■■□ 3.38
COL13A1-213ENST00000520267 CCDC141Q6ZP82 1450 aa36.18■■■■□ 3.38
COL13A1-213ENST00000520267 KIF15Q9NS87 1388 aa36.17■■■■□ 3.38
COL13A1-213ENST00000520267 NUP155O75694 1391 aa36.15■■■■□ 3.38
COL13A1-213ENST00000520267 KDM5DQ9BY66 1539 aa36.13■■■■□ 3.37
COL13A1-213ENST00000520267 ARHGAP5Q13017 1502 aa36.12■■■■□ 3.37
COL13A1-213ENST00000520267 SYCP2Q9BX26 1530 aa36.1■■■■□ 3.37
COL13A1-213ENST00000520267 MYO5CQ9NQX4 1742 aa36.09■■■■□ 3.37
COL13A1-213ENST00000520267 RSPH4AQ5TD94 716 aa36.08■■■■□ 3.37
COL13A1-213ENST00000520267 ZCCHC11Q5TAX3 1644 aaKnown RBP36.06■■■■□ 3.36
COL13A1-213ENST00000520267 C11orf95C9JLR9 678 aaPredicted RBP36.03■■■■□ 3.36
COL13A1-213ENST00000520267 MAST1Q9Y2H9 1570 aa36.01■■■■□ 3.36
COL13A1-213ENST00000520267 UHRF1BP1LA0JNW5 1464 aa36.01■■■■□ 3.35
COL13A1-213ENST00000520267 SPATA31E1Q6ZUB1 1445 aa36.01■■■■□ 3.35
COL13A1-213ENST00000520267 CCDC7Q96M83 1385 aa35.97■■■■□ 3.35
COL13A1-213ENST00000520267 CNTLNQ9NXG0 1405 aa35.94■■■■□ 3.34
COL13A1-213ENST00000520267 PLEKHH2Q8IVE3 1493 aa35.93■■■■□ 3.34
COL13A1-213ENST00000520267 POLR1AO95602 1720 aaPredicted RBP35.92■■■■□ 3.34
COL13A1-213ENST00000520267 FAM135AQ9P2D6 1515 aa35.91■■■■□ 3.34
COL13A1-213ENST00000520267 ARHGEF12Q9NZN5 1544 aa35.9■■■■□ 3.34
COL13A1-213ENST00000520267 PLCH2O75038 1416 aa35.89■■■■□ 3.34
COL13A1-213ENST00000520267 ZNF326Q5BKZ1 582 aaKnown RBP35.88■■■■□ 3.33
COL13A1-213ENST00000520267 PLXNC1O60486 1568 aa35.87■■■■□ 3.33
COL13A1-213ENST00000520267 UNC13BO14795 1591 aa35.85■■■■□ 3.33
COL13A1-213ENST00000520267 SUPT16HQ9Y5B9 1047 aaKnown RBP35.84■■■■□ 3.33
COL13A1-213ENST00000520267 UHRF1BP1Q6BDS2 1440 aa35.84■■■■□ 3.33
COL13A1-213ENST00000520267 KIF7Q2M1P5 1343 aa35.83■■■■□ 3.33
COL13A1-213ENST00000520267 EFCAB2Q5VUJ9 269 aa35.78■■■■□ 3.32
COL13A1-213ENST00000520267 USP47Q96K76 1375 aa35.78■■■■□ 3.32
COL13A1-213ENST00000520267 KDM5CP41229 1560 aa35.77■■■■□ 3.32
COL13A1-213ENST00000520267 ABCC1P33527 1531 aa35.77■■■■□ 3.32
COL13A1-213ENST00000520267 RALGAPBQ86X10 1494 aa35.76■■■■□ 3.31
COL13A1-213ENST00000520267 BCORL1Q5H9F3 1711 aa35.75■■■■□ 3.31
COL13A1-213ENST00000520267 DUOX2Q9NRD8 1548 aa35.75■■■■□ 3.31
COL13A1-213ENST00000520267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.72■■■■□ 3.31
COL13A1-213ENST00000520267 IQGAP3Q86VI3 1631 aa35.72■■■■□ 3.31
COL13A1-213ENST00000520267 KDM2AQ9Y2K7 1162 aa35.7■■■■□ 3.31
COL13A1-213ENST00000520267 TRAPPC8Q9Y2L5 1435 aa35.7■■■■□ 3.31
COL13A1-213ENST00000520267 DCAF11Q8TEB1 546 aa35.68■■■■□ 3.3
COL13A1-213ENST00000520267 PRKRIP1Q9H875 184 aaPredicted RBP35.67■■■■□ 3.3
COL13A1-213ENST00000520267 ERBINQ96RT1 1412 aa35.66■■■■□ 3.3
COL13A1-213ENST00000520267 PLA2R1Q13018 1463 aa35.66■■■■□ 3.3
COL13A1-213ENST00000520267 CCDC144AA2RUR9 1427 aa35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms