RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 SIGLEC1Q9BZZ2 1709 aa33.05■■■□□ 2.88
HDAC2-207ENST00000520170 CDK11AQ9UQ88 783 aaPredicted RBP33.04■■■□□ 2.88
HDAC2-207ENST00000520170 MYO5CQ9NQX4 1742 aa33.04■■■□□ 2.88
HDAC2-207ENST00000520170 PCF11O94913 1555 aaKnown RBP33.04■■■□□ 2.88
HDAC2-207ENST00000520170 MAGI2Q86UL8 1455 aa33.03■■■□□ 2.88
HDAC2-207ENST00000520170 EFCAB2Q5VUJ9 269 aa33.01■■■□□ 2.87
HDAC2-207ENST00000520170 LMTK3Q96Q04 1460 aa33■■■□□ 2.87
HDAC2-207ENST00000520170 MLECQ14165 292 aa33■■■□□ 2.87
HDAC2-207ENST00000520170 KIF14Q15058 1648 aa32.99■■■□□ 2.87
HDAC2-207ENST00000520170 LRRIQ1Q96JM4 1722 aa32.94■■■□□ 2.86
HDAC2-207ENST00000520170 TROQ12816 1431 aaPredicted RBP32.93■■■□□ 2.86
HDAC2-207ENST00000520170 FER1L4A9Z1Z3 1794 aa32.92■■■□□ 2.86
HDAC2-207ENST00000520170 FBXO41Q8TF61 875 aa32.9■■■□□ 2.86
HDAC2-207ENST00000520170 ATP10AO60312 1499 aa32.89■■■□□ 2.86
HDAC2-207ENST00000520170 CLIP1P30622 1438 aa32.89■■■□□ 2.86
HDAC2-207ENST00000520170 HSPA2P54652 639 aa32.89■■■□□ 2.86
HDAC2-207ENST00000520170 ARHGAP5Q13017 1502 aa32.88■■■□□ 2.85
HDAC2-207ENST00000520170 C9orf84Q5VXU9 1444 aa32.85■■■□□ 2.85
HDAC2-207ENST00000520170 AFAP1Q8N556 730 aa32.83■■■□□ 2.85
HDAC2-207ENST00000520170 ZNF518AQ6AHZ1 1483 aa32.82■■■□□ 2.84
HDAC2-207ENST00000520170 MYT1LQ9UL68 1186 aa32.82■■■□□ 2.84
HDAC2-207ENST00000520170 CDC42BPBQ9Y5S2 1711 aa32.8■■■□□ 2.84
HDAC2-207ENST00000520170 ARHGEF12Q9NZN5 1544 aa32.78■■■□□ 2.84
HDAC2-207ENST00000520170 KDM5CP41229 1560 aa32.75■■■□□ 2.83
HDAC2-207ENST00000520170 CASKIN1Q8WXD9 1431 aa32.74■■■□□ 2.83
HDAC2-207ENST00000520170 CCDC18Q5T9S5 1454 aa32.73■■■□□ 2.83
HDAC2-207ENST00000520170 CEBPAP49715 358 aaPredicted RBP32.72■■■□□ 2.83
HDAC2-207ENST00000520170 PREX2Q70Z35 1606 aa32.7■■■□□ 2.83
HDAC2-207ENST00000520170 DIP2CQ9Y2E4 1556 aa32.68■■■□□ 2.82
HDAC2-207ENST00000520170 PREX1Q8TCU6 1659 aa32.66■■■□□ 2.82
HDAC2-207ENST00000520170 ABCA6Q8N139 1617 aa32.64■■■□□ 2.82
HDAC2-207ENST00000520170 TRAPPC8Q9Y2L5 1435 aa32.64■■■□□ 2.82
HDAC2-207ENST00000520170 CDC42BPAQ5VT25 1732 aa32.63■■■□□ 2.81
HDAC2-207ENST00000520170 ABCC1P33527 1531 aa32.63■■■□□ 2.81
HDAC2-207ENST00000520170 MLH3Q9UHC1 1453 aa32.63■■■□□ 2.81
HDAC2-207ENST00000520170 ITSN2Q9NZM3 1697 aa32.62■■■□□ 2.81
HDAC2-207ENST00000520170 SETD1BQ9UPS6 1966 aaKnown RBP32.6■■■□□ 2.81
HDAC2-207ENST00000520170 REREQ9P2R6 1566 aa32.6■■■□□ 2.81
HDAC2-207ENST00000520170 FYCO1Q9BQS8 1478 aa32.6■■■□□ 2.81
HDAC2-207ENST00000520170 ZNF777Q9ULD5 760 aaPredicted RBP32.56■■■□□ 2.8
HDAC2-207ENST00000520170 KIDINS220Q9ULH0 1771 aa32.54■■■□□ 2.8
HDAC2-207ENST00000520170 CERKQ8TCT0 537 aa32.53■■■□□ 2.8
HDAC2-207ENST00000520170 ESF1Q9H501 851 aaKnown RBP32.53■■■□□ 2.8
HDAC2-207ENST00000520170 C3P01024 1663 aa32.51■■■□□ 2.79
HDAC2-207ENST00000520170 AGLP35573 1532 aa32.51■■■□□ 2.79
HDAC2-207ENST00000520170 UHRF1BP1Q6BDS2 1440 aa32.51■■■□□ 2.79
HDAC2-207ENST00000520170 STRCQ7RTU9 1775 aa32.47■■■□□ 2.79
HDAC2-207ENST00000520170 SAMD9LQ8IVG5 1584 aa32.47■■■□□ 2.79
HDAC2-207ENST00000520170 GPATCH8Q9UKJ3 1502 aaKnown RBP32.46■■■□□ 2.79
HDAC2-207ENST00000520170 HNRNPMP52272 730 aaKnown RBP eCLIP32.44■■■□□ 2.78
HDAC2-207ENST00000520170 SYCP2Q9BX26 1530 aa32.43■■■□□ 2.78
HDAC2-207ENST00000520170 DMRT2Q9Y5R5 561 aa32.42■■■□□ 2.78
HDAC2-207ENST00000520170 SPAG9O60271 1321 aaKnown RBP32.41■■■□□ 2.78
HDAC2-207ENST00000520170 CFDP1Q9UEE9 299 aaPredicted RBP32.39■■■□□ 2.78
HDAC2-207ENST00000520170 SUPT6HQ7KZ85 1726 aaKnown RBP32.37■■■□□ 2.77
HDAC2-207ENST00000520170 CCNB3Q8WWL7 1395 aa32.36■■■□□ 2.77
HDAC2-207ENST00000520170 CNTLNQ9NXG0 1405 aa32.35■■■□□ 2.77
HDAC2-207ENST00000520170 MTUS2Q5JR59 1369 aa32.34■■■□□ 2.77
HDAC2-207ENST00000520170 PLEKHH2Q8IVE3 1493 aa32.31■■■□□ 2.76
HDAC2-207ENST00000520170 KIAA1107Q9UPP5 1409 aa32.31■■■□□ 2.76
HDAC2-207ENST00000520170 ATP7AQ04656 1500 aa32.31■■■□□ 2.76
HDAC2-207ENST00000520170 MROH2AA6NES4 1674 aa32.27■■■□□ 2.76
HDAC2-207ENST00000520170 INO80Q9ULG1 1556 aaPredicted RBP32.26■■■□□ 2.75
HDAC2-207ENST00000520170 ZMYM3Q14202 1370 aa32.25■■■□□ 2.75
HDAC2-207ENST00000520170 PTPRTO14522 1441 aa32.25■■■□□ 2.75
HDAC2-207ENST00000520170 A2MP01023 1474 aa32.23■■■□□ 2.75
HDAC2-207ENST00000520170 CLTCQ00610 1675 aaKnown RBP32.22■■■□□ 2.75
HDAC2-207ENST00000520170 ZNF644Q9H582 1327 aaPredicted RBP32.22■■■□□ 2.75
HDAC2-207ENST00000520170 NPATQ14207 1427 aa32.21■■■□□ 2.75
HDAC2-207ENST00000520170 PLXNC1O60486 1568 aa32.2■■■□□ 2.75
HDAC2-207ENST00000520170 GGT6Q6P531 493 aa32.2■■■□□ 2.75
HDAC2-207ENST00000520170 TIAM1Q13009 1591 aa32.19■■■□□ 2.74
HDAC2-207ENST00000520170 NCOA1Q15788 1441 aa32.17■■■□□ 2.74
HDAC2-207ENST00000520170 EHBP1L1Q8N3D4 1523 aa32.17■■■□□ 2.74
HDAC2-207ENST00000520170 CAMSAP1Q5T5Y3 1602 aa32.15■■■□□ 2.74
HDAC2-207ENST00000520170 ADGBQ8N7X0 1667 aa32.15■■■□□ 2.74
HDAC2-207ENST00000520170 CEP162Q5TB80 1403 aa32.13■■■□□ 2.73
HDAC2-207ENST00000520170 MBD5Q9P267 1494 aa32.1■■■□□ 2.73
HDAC2-207ENST00000520170 LTBP4Q8N2S1 1624 aa32.08■■■□□ 2.73
HDAC2-207ENST00000520170 NCKAP5LQ9HCH0 1330 aa32.07■■■□□ 2.72
HDAC2-207ENST00000520170 PTPRKQ15262 1439 aa32.07■■■□□ 2.72
HDAC2-207ENST00000520170 MYO3AQ8NEV4 1616 aa32.07■■■□□ 2.72
HDAC2-207ENST00000520170 PPP6R1Q9UPN7 881 aa32.05■■■□□ 2.72
HDAC2-207ENST00000520170 RTEL1-TNFRSF6BF6WH68 1400 aa32.03■■■□□ 2.72
HDAC2-207ENST00000520170 ZNF142P52746 1687 aaPredicted RBP32.03■■■□□ 2.72
HDAC2-207ENST00000520170 CEP170BQ9Y4F5 1589 aaPredicted RBP32.01■■■□□ 2.71
HDAC2-207ENST00000520170 NCOA2Q15596 1464 aa32■■■□□ 2.71
HDAC2-207ENST00000520170 DHX29Q7Z478 1369 aaKnown RBP32■■■□□ 2.71
HDAC2-207ENST00000520170 KIF3BO15066 747 aa31.96■■■□□ 2.71
HDAC2-207ENST00000520170 PKD2Q13563 968 aa31.96■■■□□ 2.71
HDAC2-207ENST00000520170 CAMSAP2Q08AD1 1489 aa31.96■■■□□ 2.71
HDAC2-207ENST00000520170 CCDC141Q6ZP82 1450 aa31.96■■■□□ 2.71
HDAC2-207ENST00000520170 PLA2R1Q13018 1463 aa31.95■■■□□ 2.7
HDAC2-207ENST00000520170 IQSEC2Q5JU85 1478 aa31.94■■■□□ 2.7
HDAC2-207ENST00000520170 ZNF335Q9H4Z2 1342 aaPredicted RBP31.94■■■□□ 2.7
HDAC2-207ENST00000520170 RSPH4AQ5TD94 716 aa31.92■■■□□ 2.7
HDAC2-207ENST00000520170 DISP3Q9P2K9 1392 aa31.92■■■□□ 2.7
HDAC2-207ENST00000520170 TCOF1Q13428 1488 aaKnown RBP31.9■■■□□ 2.7
HDAC2-207ENST00000520170 A2ML1A8K2U0 1454 aa31.88■■■□□ 2.69
HDAC2-207ENST00000520170 FBXO31Q5XUX0 539 aaPredicted RBP31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms