RNA–Protein interactions for RNA: ENST00000520163.1

AC109479.3-201, humanhuman

TSL 3 BASIC

Gene AC109479.3, Length 360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109479.3-201ENST00000520163 CEBPAP49715 358 aaPredicted RBP21.89■■□□□ 1.09
AC109479.3-201ENST00000520163 PLCH2O75038 1416 aa21.88■■□□□ 1.09
AC109479.3-201ENST00000520163 ARHGEF12Q9NZN5 1544 aa21.87■■□□□ 1.09
AC109479.3-201ENST00000520163 ATP10AO60312 1499 aa21.86■■□□□ 1.09
AC109479.3-201ENST00000520163 CDK13Q14004 1512 aaKnown RBP21.85■■□□□ 1.09
AC109479.3-201ENST00000520163 FER1L4A9Z1Z3 1794 aa21.84■■□□□ 1.09
AC109479.3-201ENST00000520163 C9orf84Q5VXU9 1444 aa21.83■■□□□ 1.09
AC109479.3-201ENST00000520163 DISP3Q9P2K9 1392 aa21.83■■□□□ 1.08
AC109479.3-201ENST00000520163 EFCAB2Q5VUJ9 269 aa21.79■■□□□ 1.08
AC109479.3-201ENST00000520163 SOCS7O14512 581 aa21.78■■□□□ 1.08
AC109479.3-201ENST00000520163 EEA1Q15075 1411 aa21.78■■□□□ 1.08
AC109479.3-201ENST00000520163 DMRT2Q9Y5R5 561 aa21.77■■□□□ 1.08
AC109479.3-201ENST00000520163 AFAP1Q8N556 730 aa21.76■■□□□ 1.07
AC109479.3-201ENST00000520163 PREX1Q8TCU6 1659 aa21.75■■□□□ 1.07
AC109479.3-201ENST00000520163 STRCQ7RTU9 1775 aa21.74■■□□□ 1.07
AC109479.3-201ENST00000520163 UHRF1BP1Q6BDS2 1440 aa21.73■■□□□ 1.07
AC109479.3-201ENST00000520163 ATP1B4Q9UN42 357 aaPredicted RBP21.71■■□□□ 1.07
AC109479.3-201ENST00000520163 ZNF518AQ6AHZ1 1483 aa21.71■■□□□ 1.07
AC109479.3-201ENST00000520163 PTPRTO14522 1441 aa21.68■■□□□ 1.06
AC109479.3-201ENST00000520163 KDM5CP41229 1560 aa21.68■■□□□ 1.06
AC109479.3-201ENST00000520163 KIF14Q15058 1648 aa21.66■■□□□ 1.06
AC109479.3-201ENST00000520163 CDK11AQ9UQ88 783 aaPredicted RBP21.65■■□□□ 1.06
AC109479.3-201ENST00000520163 TROQ12816 1431 aaPredicted RBP21.64■■□□□ 1.06
AC109479.3-201ENST00000520163 MYT1LQ9UL68 1186 aa21.64■■□□□ 1.05
AC109479.3-201ENST00000520163 DIP2CQ9Y2E4 1556 aa21.64■■□□□ 1.05
AC109479.3-201ENST00000520163 FMN1Q68DA7 1419 aa21.63■■□□□ 1.05
AC109479.3-201ENST00000520163 ARHGAP5Q13017 1502 aa21.63■■□□□ 1.05
AC109479.3-201ENST00000520163 MYO5CQ9NQX4 1742 aa21.63■■□□□ 1.05
AC109479.3-201ENST00000520163 LTBP4Q8N2S1 1624 aa21.62■■□□□ 1.05
AC109479.3-201ENST00000520163 ARHGAP35Q9NRY4 1499 aa21.61■■□□□ 1.05
AC109479.3-201ENST00000520163 EHMT2Q96KQ7 1210 aa21.61■■□□□ 1.05
AC109479.3-201ENST00000520163 SETD1BQ9UPS6 1966 aaKnown RBP21.61■■□□□ 1.05
AC109479.3-201ENST00000520163 REREQ9P2R6 1566 aa21.61■■□□□ 1.05
AC109479.3-201ENST00000520163 MLH3Q9UHC1 1453 aa21.6■■□□□ 1.05
AC109479.3-201ENST00000520163 TRAPPC8Q9Y2L5 1435 aa21.6■■□□□ 1.05
AC109479.3-201ENST00000520163 SPATA31D1Q6ZQQ2 1576 aa21.6■■□□□ 1.05
AC109479.3-201ENST00000520163 AGLP35573 1532 aa21.58■■□□□ 1.04
AC109479.3-201ENST00000520163 ABCA6Q8N139 1617 aa21.58■■□□□ 1.04
AC109479.3-201ENST00000520163 NCOA1Q15788 1441 aa21.57■■□□□ 1.04
AC109479.3-201ENST00000520163 C3P01024 1663 aa21.56■■□□□ 1.04
AC109479.3-201ENST00000520163 UBTFP17480 764 aaKnown RBP21.56■■□□□ 1.04
AC109479.3-201ENST00000520163 CLIP1P30622 1438 aa21.55■■□□□ 1.04
AC109479.3-201ENST00000520163 ESF1Q9H501 851 aaKnown RBP21.55■■□□□ 1.04
AC109479.3-201ENST00000520163 IQSEC2Q5JU85 1478 aa21.52■■□□□ 1.04
AC109479.3-201ENST00000520163 ABCC1P33527 1531 aa21.5■■□□□ 1.03
AC109479.3-201ENST00000520163 CNTLNQ9NXG0 1405 aa21.5■■□□□ 1.03
AC109479.3-201ENST00000520163 CDC42BPBQ9Y5S2 1711 aa21.48■■□□□ 1.03
AC109479.3-201ENST00000520163 NCKAP5LQ9HCH0 1330 aa21.48■■□□□ 1.03
AC109479.3-201ENST00000520163 ZNF335Q9H4Z2 1342 aaPredicted RBP21.47■■□□□ 1.03
AC109479.3-201ENST00000520163 ZMYM3Q14202 1370 aa21.46■■□□□ 1.03
AC109479.3-201ENST00000520163 NPATQ14207 1427 aa21.46■■□□□ 1.03
AC109479.3-201ENST00000520163 CAMSAP1Q5T5Y3 1602 aa21.45■■□□□ 1.02
AC109479.3-201ENST00000520163 LRRIQ1Q96JM4 1722 aa21.44■■□□□ 1.02
AC109479.3-201ENST00000520163 KIDINS220Q9ULH0 1771 aa21.44■■□□□ 1.02
AC109479.3-201ENST00000520163 PREX2Q70Z35 1606 aa21.44■■□□□ 1.02
AC109479.3-201ENST00000520163 UBAP1LF5GYI3 381 aa21.42■■□□□ 1.02
AC109479.3-201ENST00000520163 ITSN2Q9NZM3 1697 aa21.41■■□□□ 1.02
AC109479.3-201ENST00000520163 SAMD9LQ8IVG5 1584 aa21.39■■□□□ 1.01
AC109479.3-201ENST00000520163 ZNF777Q9ULD5 760 aaPredicted RBP21.38■■□□□ 1.01
AC109479.3-201ENST00000520163 CASKIN1Q8WXD9 1431 aa21.38■■□□□ 1.01
AC109479.3-201ENST00000520163 SPAG9O60271 1321 aaKnown RBP21.36■■□□□ 1.01
AC109479.3-201ENST00000520163 HNRNPMP52272 730 aaKnown RBP eCLIP21.36■■□□□ 1.01
AC109479.3-201ENST00000520163 PKD2Q13563 968 aa21.36■■□□□ 1.01
AC109479.3-201ENST00000520163 CCDC18Q5T9S5 1454 aa21.35■■□□□ 1.01
AC109479.3-201ENST00000520163 PTPRKQ15262 1439 aa21.35■■□□□ 1.01
AC109479.3-201ENST00000520163 PLA2R1Q13018 1463 aa21.34■■□□□ 1.01
AC109479.3-201ENST00000520163 TCOF1Q13428 1488 aaKnown RBP21.34■■□□□ 1.01
AC109479.3-201ENST00000520163 MROH2AA6NES4 1674 aa21.34■■□□□ 1.01
AC109479.3-201ENST00000520163 SYCP2Q9BX26 1530 aa21.33■■□□□ 1
AC109479.3-201ENST00000520163 GPATCH8Q9UKJ3 1502 aaKnown RBP21.32■■□□□ 1
AC109479.3-201ENST00000520163 CDC42BPAQ5VT25 1732 aa21.31■■□□□ 1
AC109479.3-201ENST00000520163 PLXNC1O60486 1568 aa21.29■■□□□ 1
AC109479.3-201ENST00000520163 GGT6Q6P531 493 aa21.29■■□□□ 1
AC109479.3-201ENST00000520163 PPP6R1Q9UPN7 881 aa21.29■■□□□ 1
AC109479.3-201ENST00000520163 CEP170BQ9Y4F5 1589 aaPredicted RBP21.28■■□□□ 1
AC109479.3-201ENST00000520163 A2MP01023 1474 aa21.28■■□□□ 1
AC109479.3-201ENST00000520163 MYO3AQ8NEV4 1616 aa21.28■■□□□ 1
AC109479.3-201ENST00000520163 KIAA1107Q9UPP5 1409 aa21.28■■□□□ 1
AC109479.3-201ENST00000520163 ATP7AQ04656 1500 aa21.27■■□□□ 1
AC109479.3-201ENST00000520163 ZNF142P52746 1687 aaPredicted RBP21.27■■□□□ 1
AC109479.3-201ENST00000520163 SUPT6HQ7KZ85 1726 aaKnown RBP21.26■□□□□ 0.99
AC109479.3-201ENST00000520163 CLTCQ00610 1675 aaKnown RBP21.26■□□□□ 0.99
AC109479.3-201ENST00000520163 HSPA1LP34931 641 aa21.26■□□□□ 0.99
AC109479.3-201ENST00000520163 CFDP1Q9UEE9 299 aaPredicted RBP21.24■□□□□ 0.99
AC109479.3-201ENST00000520163 INO80Q9ULG1 1556 aaPredicted RBP21.23■□□□□ 0.99
AC109479.3-201ENST00000520163 FYCO1Q9BQS8 1478 aa21.22■□□□□ 0.99
AC109479.3-201ENST00000520163 PIP4K2BP78356 416 aa21.21■□□□□ 0.99
AC109479.3-201ENST00000520163 CHIC1Q5VXU3 224 aa21.21■□□□□ 0.99
AC109479.3-201ENST00000520163 A2ML1A8K2U0 1454 aa21.2■□□□□ 0.98
AC109479.3-201ENST00000520163 PLEKHH2Q8IVE3 1493 aa21.2■□□□□ 0.98
AC109479.3-201ENST00000520163 SCAF1Q9H7N4 1312 aaKnown RBP21.19■□□□□ 0.98
AC109479.3-201ENST00000520163 ZNF644Q9H582 1327 aaPredicted RBP21.18■□□□□ 0.98
AC109479.3-201ENST00000520163 CCNB3Q8WWL7 1395 aa21.18■□□□□ 0.98
AC109479.3-201ENST00000520163 MED1Q15648 1581 aaPredicted RBP21.18■□□□□ 0.98
AC109479.3-201ENST00000520163 FBXO31Q5XUX0 539 aaPredicted RBP21.17■□□□□ 0.98
AC109479.3-201ENST00000520163 DNMT1P26358 1616 aaKnown RBP21.16■□□□□ 0.98
AC109479.3-201ENST00000520163 TOM1O60784 492 aa21.16■□□□□ 0.98
AC109479.3-201ENST00000520163 MBD5Q9P267 1494 aa21.13■□□□□ 0.97
AC109479.3-201ENST00000520163 SHANK2Q9UPX8 1470 aa21.13■□□□□ 0.97
AC109479.3-201ENST00000520163 NEURL4Q96JN8 1562 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms