RNA–Protein interactions for RNA: ENST00000516998.1

RNU6-1006P-201, Transcript of RNA, U6 small nuclear 1006, pseudogene, humanhuman

BASIC

Gene RNU6-1006P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1006P-201ENST00000516998 ZNF787Q6DD87 383 aa4.68□□□□□ -1.66
RNU6-1006P-201ENST00000516998 HRO43593 1189 aa4.65□□□□□ -1.67
RNU6-1006P-201ENST00000516998 GFRA3O60609 400 aa4.63□□□□□ -1.67
RNU6-1006P-201ENST00000516998 DMRTA1Q5VZB9 504 aa4.62□□□□□ -1.67
RNU6-1006P-201ENST00000516998 PROM2Q8N271 834 aa4.62□□□□□ -1.67
RNU6-1006P-201ENST00000516998 NUDT7P0C024 238 aa4.61□□□□□ -1.67
RNU6-1006P-201ENST00000516998 PLCD3Q8N3E9 789 aa4.61□□□□□ -1.67
RNU6-1006P-201ENST00000516998 LHX6Q9UPM6 363 aa4.61□□□□□ -1.67
RNU6-1006P-201ENST00000516998 PSEN1P49768 467 aa4.59□□□□□ -1.67
RNU6-1006P-201ENST00000516998 LAPTM4AQ15012 233 aa4.59□□□□□ -1.67
RNU6-1006P-201ENST00000516998 ARHGAP33O14559 1287 aa4.58□□□□□ -1.68
RNU6-1006P-201ENST00000516998 PSEN2P49810 448 aa4.58□□□□□ -1.68
RNU6-1006P-201ENST00000516998 CSRNP3Q8WYN3 585 aa4.57□□□□□ -1.68
RNU6-1006P-201ENST00000516998 CABP2Q9NPB3 220 aa4.57□□□□□ -1.68
RNU6-1006P-201ENST00000516998 TK2O00142 265 aa4.56□□□□□ -1.68
RNU6-1006P-201ENST00000516998 MICALL2Q8IY33 904 aa4.56□□□□□ -1.68
RNU6-1006P-201ENST00000516998 ZNF467Q7Z7K2 595 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1006P-201ENST00000516998 STAC3Q96MF2 364 aa4.54□□□□□ -1.68
RNU6-1006P-201ENST00000516998 LCE2AQ5TA79 106 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1006P-201ENST00000516998 THSD4Q6ZMP0 1018 aa4.53□□□□□ -1.68
RNU6-1006P-201ENST00000516998 ZBTB47Q9UFB7 747 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1006P-201ENST00000516998 SUZ12Q15022 739 aaKnown RBP4.52□□□□□ -1.69
RNU6-1006P-201ENST00000516998 EHMT2Q96KQ7 1210 aa4.52□□□□□ -1.69
RNU6-1006P-201ENST00000516998 NRG2O14511 850 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1006P-201ENST00000516998 POTECB2RU33 542 aa4.5□□□□□ -1.69
RNU6-1006P-201ENST00000516998 ITGBL1O95965 494 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1006P-201ENST00000516998 TREML4Q6UXN2 200 aa4.48□□□□□ -1.69
RNU6-1006P-201ENST00000516998 STK17AQ9UEE5 414 aa4.47□□□□□ -1.69
RNU6-1006P-201ENST00000516998 PDAP1Q13442 181 aaKnown RBP4.46□□□□□ -1.7
RNU6-1006P-201ENST00000516998 PCDHGA4Q9Y5G9 962 aa4.46□□□□□ -1.7
RNU6-1006P-201ENST00000516998 WNT2BQ93097 391 aa4.45□□□□□ -1.7
RNU6-1006P-201ENST00000516998 VPS9D1Q9Y2B5 631 aa4.44□□□□□ -1.7
RNU6-1006P-201ENST00000516998 EFCAB3Q8N7B9 438 aa4.43□□□□□ -1.7
RNU6-1006P-201ENST00000516998 KCNK17Q96T54 332 aa4.43□□□□□ -1.7
RNU6-1006P-201ENST00000516998 PRKD2Q9BZL6 878 aa4.41□□□□□ -1.7
RNU6-1006P-201ENST00000516998 MS4A4AQ96JQ5 239 aa4.4□□□□□ -1.71
RNU6-1006P-201ENST00000516998 GOLGA8CPA6NN73 597 aa4.39□□□□□ -1.71
RNU6-1006P-201ENST00000516998 PDZRN3Q9UPQ7 1066 aa4.39□□□□□ -1.71
RNU6-1006P-201ENST00000516998 BHMG1C9JSJ3 638 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1006P-201ENST00000516998 CHRM1P11229 460 aaPredicted RBP4.37□□□□□ -1.71
RNU6-1006P-201ENST00000516998 KCNC4Q03721 635 aa4.37□□□□□ -1.71
RNU6-1006P-201ENST00000516998 KDM4FA0A1W2PPD8 638 aa4.36□□□□□ -1.71
RNU6-1006P-201ENST00000516998 PSDA5PKW4 1024 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1006P-201ENST00000516998 C2orf72A6NCS6 295 aa4.35□□□□□ -1.71
RNU6-1006P-201ENST00000516998 KIF3CO14782 793 aa4.34□□□□□ -1.71
RNU6-1006P-201ENST00000516998 WFS1O76024 890 aa4.34□□□□□ -1.71
RNU6-1006P-201ENST00000516998 PPP4R3BQ5MIZ7 849 aa4.34□□□□□ -1.71
RNU6-1006P-201ENST00000516998 MRPL50Q8N5N7 158 aaKnown RBP4.34□□□□□ -1.71
RNU6-1006P-201ENST00000516998 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.71
RNU6-1006P-201ENST00000516998 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
RNU6-1006P-201ENST00000516998 SLC34A2O95436 690 aa4.33□□□□□ -1.72
RNU6-1006P-201ENST00000516998 BCAMP50895 628 aa4.33□□□□□ -1.72
RNU6-1006P-201ENST00000516998 INSM1Q01101 510 aaPredicted RBP4.33□□□□□ -1.72
RNU6-1006P-201ENST00000516998 MYT1Q01538 1121 aa4.33□□□□□ -1.72
RNU6-1006P-201ENST00000516998 KLHL34Q8N239 644 aa4.33□□□□□ -1.72
RNU6-1006P-201ENST00000516998 WIPF1O43516 503 aa4.32□□□□□ -1.72
RNU6-1006P-201ENST00000516998 GSE1Q14687 1217 aa4.32□□□□□ -1.72
RNU6-1006P-201ENST00000516998 LCE2CQ5TA81 110 aa4.32□□□□□ -1.72
RNU6-1006P-201ENST00000516998 PHF8Q9UPP1 1060 aa4.31□□□□□ -1.72
RNU6-1006P-201ENST00000516998 KCNH8Q96L42 1107 aa4.3□□□□□ -1.72
RNU6-1006P-201ENST00000516998 NFX1Q12986 1120 aaKnown RBP4.29□□□□□ -1.72
RNU6-1006P-201ENST00000516998 KRTAP9-2Q9BYQ4 174 aa4.29□□□□□ -1.72
RNU6-1006P-201ENST00000516998 V9GY48 417 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1006P-201ENST00000516998 KRTAP9-6A0A140TA67 174 aa4.28□□□□□ -1.72
RNU6-1006P-201ENST00000516998 XP32Q5T750 250 aa4.28□□□□□ -1.72
RNU6-1006P-201ENST00000516998 SLC4A5Q9BY07 1137 aa4.28□□□□□ -1.72
RNU6-1006P-201ENST00000516998 WBP1LQ9NX94 342 aa4.28□□□□□ -1.72
RNU6-1006P-201ENST00000516998 ST8SIA5O15466 376 aa4.27□□□□□ -1.73
RNU6-1006P-201ENST00000516998 ZBED2Q9BTP6 218 aa4.27□□□□□ -1.73
RNU6-1006P-201ENST00000516998 PKDCCQ504Y2 493 aa4.26□□□□□ -1.73
RNU6-1006P-201ENST00000516998 TRIM67Q6ZTA4 783 aa4.26□□□□□ -1.73
RNU6-1006P-201ENST00000516998 KRTAP1-3Q8IUG1 177 aa4.26□□□□□ -1.73
RNU6-1006P-201ENST00000516998 FKBP8Q14318 412 aa4.25□□□□□ -1.73
RNU6-1006P-201ENST00000516998 PPP1R18Q6NYC8 613 aa4.25□□□□□ -1.73
RNU6-1006P-201ENST00000516998 ANKK1Q8NFD2 765 aa4.25□□□□□ -1.73
RNU6-1006P-201ENST00000516998 CIZ1Q9ULV3 898 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1006P-201ENST00000516998 NBPF3Q9H094 633 aa4.24□□□□□ -1.73
RNU6-1006P-201ENST00000516998 SOX12O15370 315 aa4.23□□□□□ -1.73
RNU6-1006P-201ENST00000516998 SOWAHBA6NEL2 793 aa4.22□□□□□ -1.73
RNU6-1006P-201ENST00000516998 FBXO3Q9UK99 471 aa4.22□□□□□ -1.73
RNU6-1006P-201ENST00000516998 NYAP1Q6ZVC0 841 aa4.21□□□□□ -1.74
RNU6-1006P-201ENST00000516998 BCL2L12Q9HB09 334 aa4.21□□□□□ -1.74
RNU6-1006P-201ENST00000516998 DGAT1O75907 488 aa4.2□□□□□ -1.74
RNU6-1006P-201ENST00000516998 KCTD17Q8N5Z5 321 aa4.2□□□□□ -1.74
RNU6-1006P-201ENST00000516998 PTCD2Q8WV60 388 aaKnown RBP4.2□□□□□ -1.74
RNU6-1006P-201ENST00000516998 DACH1Q9UI36 760 aa4.2□□□□□ -1.74
RNU6-1006P-201ENST00000516998 LORP23490 312 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1006P-201ENST00000516998 ZNF454Q8N9F8 522 aa4.19□□□□□ -1.74
RNU6-1006P-201ENST00000516998 AAASQ9NRG9 546 aa4.19□□□□□ -1.74
RNU6-1006P-201ENST00000516998 FAM187AA6NFU0 413 aa4.18□□□□□ -1.74
RNU6-1006P-201ENST00000516998 PTPREP23469 700 aa4.18□□□□□ -1.74
RNU6-1006P-201ENST00000516998 VASPP50552 380 aaPredicted RBP4.18□□□□□ -1.74
RNU6-1006P-201ENST00000516998 TMC2Q8TDI7 906 aa4.17□□□□□ -1.74
RNU6-1006P-201ENST00000516998 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.17□□□□□ -1.74
RNU6-1006P-201ENST00000516998 GMPR2Q9P2T1 348 aaKnown RBP4.17□□□□□ -1.74
RNU6-1006P-201ENST00000516998 FAM181BA6NEQ2 426 aa4.16□□□□□ -1.74
RNU6-1006P-201ENST00000516998 PROX2Q3B8N5 592 aa4.16□□□□□ -1.74
RNU6-1006P-201ENST00000516998 TJAP1Q5JTD0 557 aa4.16□□□□□ -1.74
RNU6-1006P-201ENST00000516998 FBXO22Q8NEZ5 403 aa4.16□□□□□ -1.74
RNU6-1006P-201ENST00000516998 PSMG3-AS1Q96PY0 264 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms