RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 PBX2P40425 430 aa4.03□□□□□ -1.76
RNU6-557P-201ENST00000516842 ZNF787Q6DD87 383 aa4.03□□□□□ -1.76
RNU6-557P-201ENST00000516842 HRO43593 1189 aa4.02□□□□□ -1.77
RNU6-557P-201ENST00000516842 IFFO2Q5TF58 517 aa4.02□□□□□ -1.77
RNU6-557P-201ENST00000516842 NUDT7P0C024 238 aa4.01□□□□□ -1.77
RNU6-557P-201ENST00000516842 PSEN1P49768 467 aa4.01□□□□□ -1.77
RNU6-557P-201ENST00000516842 DMRTA1Q5VZB9 504 aa4.01□□□□□ -1.77
RNU6-557P-201ENST00000516842 CABP2Q9NPB3 220 aa4□□□□□ -1.77
RNU6-557P-201ENST00000516842 LHX6Q9UPM6 363 aa4□□□□□ -1.77
RNU6-557P-201ENST00000516842 GFRA3O60609 400 aa3.99□□□□□ -1.77
RNU6-557P-201ENST00000516842 PSEN2P49810 448 aa3.98□□□□□ -1.77
RNU6-557P-201ENST00000516842 ARHGAP33O14559 1287 aa3.96□□□□□ -1.78
RNU6-557P-201ENST00000516842 MICALL2Q8IY33 904 aa3.96□□□□□ -1.78
RNU6-557P-201ENST00000516842 ZNF467Q7Z7K2 595 aaPredicted RBP3.95□□□□□ -1.78
RNU6-557P-201ENST00000516842 ZBTB47Q9UFB7 747 aaPredicted RBP3.94□□□□□ -1.78
RNU6-557P-201ENST00000516842 TK2O00142 265 aa3.93□□□□□ -1.78
RNU6-557P-201ENST00000516842 LAPTM4AQ15012 233 aa3.93□□□□□ -1.78
RNU6-557P-201ENST00000516842 EHMT2Q96KQ7 1210 aa3.93□□□□□ -1.78
RNU6-557P-201ENST00000516842 STAC3Q96MF2 364 aa3.93□□□□□ -1.78
RNU6-557P-201ENST00000516842 THSD4Q6ZMP0 1018 aa3.91□□□□□ -1.78
RNU6-557P-201ENST00000516842 POTECB2RU33 542 aa3.9□□□□□ -1.79
RNU6-557P-201ENST00000516842 PDAP1Q13442 181 aaKnown RBP3.89□□□□□ -1.79
RNU6-557P-201ENST00000516842 LCE2AQ5TA79 106 aaPredicted RBP3.89□□□□□ -1.79
RNU6-557P-201ENST00000516842 EFCAB3Q8N7B9 438 aa3.88□□□□□ -1.79
RNU6-557P-201ENST00000516842 PCDHGA4Q9Y5G9 962 aa3.88□□□□□ -1.79
RNU6-557P-201ENST00000516842 NRG2O14511 850 aaPredicted RBP3.87□□□□□ -1.79
RNU6-557P-201ENST00000516842 SUZ12Q15022 739 aaKnown RBP3.87□□□□□ -1.79
RNU6-557P-201ENST00000516842 ITGBL1O95965 494 aaPredicted RBP3.85□□□□□ -1.79
RNU6-557P-201ENST00000516842 TREML4Q6UXN2 200 aa3.85□□□□□ -1.79
RNU6-557P-201ENST00000516842 WNT2BQ93097 391 aa3.85□□□□□ -1.79
RNU6-557P-201ENST00000516842 MS4A4AQ96JQ5 239 aa3.85□□□□□ -1.79
RNU6-557P-201ENST00000516842 VPS9D1Q9Y2B5 631 aa3.85□□□□□ -1.79
RNU6-557P-201ENST00000516842 KCNK17Q96T54 332 aa3.84□□□□□ -1.79
RNU6-557P-201ENST00000516842 CHRM1P11229 460 aaPredicted RBP3.82□□□□□ -1.8
RNU6-557P-201ENST00000516842 C2orf72A6NCS6 295 aa3.81□□□□□ -1.8
RNU6-557P-201ENST00000516842 GOLGA8CPA6NN73 597 aa3.81□□□□□ -1.8
RNU6-557P-201ENST00000516842 PRKD2Q9BZL6 878 aa3.81□□□□□ -1.8
RNU6-557P-201ENST00000516842 STK17AQ9UEE5 414 aa3.81□□□□□ -1.8
RNU6-557P-201ENST00000516842 KDM4FA0A1W2PPD8 638 aa3.8□□□□□ -1.8
RNU6-557P-201ENST00000516842 BHMG1C9JSJ3 638 aaPredicted RBP3.8□□□□□ -1.8
RNU6-557P-201ENST00000516842 PDZRN3Q9UPQ7 1066 aa3.79□□□□□ -1.8
RNU6-557P-201ENST00000516842 KIF3CO14782 793 aa3.78□□□□□ -1.8
RNU6-557P-201ENST00000516842 KCNC4Q03721 635 aa3.78□□□□□ -1.8
RNU6-557P-201ENST00000516842 GSE1Q14687 1217 aa3.78□□□□□ -1.8
RNU6-557P-201ENST00000516842 CSRNP3Q8WYN3 585 aa3.78□□□□□ -1.8
RNU6-557P-201ENST00000516842 PHF8Q9UPP1 1060 aa3.78□□□□□ -1.8
RNU6-557P-201ENST00000516842 PSDA5PKW4 1024 aaPredicted RBP3.77□□□□□ -1.81
RNU6-557P-201ENST00000516842 SLC34A2O95436 690 aa3.77□□□□□ -1.81
RNU6-557P-201ENST00000516842 MRPL50Q8N5N7 158 aaKnown RBP3.77□□□□□ -1.81
RNU6-557P-201ENST00000516842 BCAMP50895 628 aa3.76□□□□□ -1.81
RNU6-557P-201ENST00000516842 PPP4R3BQ5MIZ7 849 aa3.76□□□□□ -1.81
RNU6-557P-201ENST00000516842 MYT1Q01538 1121 aa3.74□□□□□ -1.81
RNU6-557P-201ENST00000516842 WFS1O76024 890 aa3.73□□□□□ -1.81
RNU6-557P-201ENST00000516842 WBP1LQ9NX94 342 aa3.73□□□□□ -1.81
RNU6-557P-201ENST00000516842 LCE2CQ5TA81 110 aa3.72□□□□□ -1.81
RNU6-557P-201ENST00000516842 KCNH8Q96L42 1107 aa3.71□□□□□ -1.82
RNU6-557P-201ENST00000516842 ZBED2Q9BTP6 218 aa3.71□□□□□ -1.82
RNU6-557P-201ENST00000516842 SOX12O15370 315 aa3.7□□□□□ -1.82
RNU6-557P-201ENST00000516842 ST8SIA5O15466 376 aa3.7□□□□□ -1.82
RNU6-557P-201ENST00000516842 INSM1Q01101 510 aaPredicted RBP3.7□□□□□ -1.82
RNU6-557P-201ENST00000516842 SLC4A5Q9BY07 1137 aa3.7□□□□□ -1.82
RNU6-557P-201ENST00000516842 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.69□□□□□ -1.82
RNU6-557P-201ENST00000516842 WIPF1O43516 503 aa3.69□□□□□ -1.82
RNU6-557P-201ENST00000516842 NFX1Q12986 1120 aaKnown RBP3.69□□□□□ -1.82
RNU6-557P-201ENST00000516842 PPP1R18Q6NYC8 613 aa3.69□□□□□ -1.82
RNU6-557P-201ENST00000516842 TRIM67Q6ZTA4 783 aa3.69□□□□□ -1.82
RNU6-557P-201ENST00000516842 KLHL34Q8N239 644 aa3.69□□□□□ -1.82
RNU6-557P-201ENST00000516842 KRTAP4-8Q9BYQ9 185 aa3.69□□□□□ -1.82
RNU6-557P-201ENST00000516842 V9GY48 417 aaPredicted RBP3.69□□□□□ -1.82
RNU6-557P-201ENST00000516842 PKDCCQ504Y2 493 aa3.68□□□□□ -1.82
RNU6-557P-201ENST00000516842 ANKK1Q8NFD2 765 aa3.68□□□□□ -1.82
RNU6-557P-201ENST00000516842 SOWAHBA6NEL2 793 aa3.66□□□□□ -1.82
RNU6-557P-201ENST00000516842 ZNF454Q8N9F8 522 aa3.66□□□□□ -1.82
RNU6-557P-201ENST00000516842 PTCD2Q8WV60 388 aaKnown RBP3.66□□□□□ -1.82
RNU6-557P-201ENST00000516842 KRTAP9-2Q9BYQ4 174 aa3.66□□□□□ -1.82
RNU6-557P-201ENST00000516842 NBPF3Q9H094 633 aa3.66□□□□□ -1.82
RNU6-557P-201ENST00000516842 DACH1Q9UI36 760 aa3.66□□□□□ -1.82
RNU6-557P-201ENST00000516842 KRTAP9-6A0A140TA67 174 aa3.65□□□□□ -1.83
RNU6-557P-201ENST00000516842 XP32Q5T750 250 aa3.65□□□□□ -1.83
RNU6-557P-201ENST00000516842 FBXO22Q8NEZ5 403 aa3.65□□□□□ -1.83
RNU6-557P-201ENST00000516842 BCL2L12Q9HB09 334 aa3.65□□□□□ -1.83
RNU6-557P-201ENST00000516842 CIZ1Q9ULV3 898 aaPredicted RBP3.65□□□□□ -1.83
RNU6-557P-201ENST00000516842 PROX2Q3B8N5 592 aa3.64□□□□□ -1.83
RNU6-557P-201ENST00000516842 TMC2Q8TDI7 906 aa3.64□□□□□ -1.83
RNU6-557P-201ENST00000516842 PTPREP23469 700 aa3.63□□□□□ -1.83
RNU6-557P-201ENST00000516842 AAASQ9NRG9 546 aa3.63□□□□□ -1.83
RNU6-557P-201ENST00000516842 FAM187AA6NFU0 413 aa3.62□□□□□ -1.83
RNU6-557P-201ENST00000516842 DGAT1O75907 488 aa3.62□□□□□ -1.83
RNU6-557P-201ENST00000516842 TJAP1Q5JTD0 557 aa3.62□□□□□ -1.83
RNU6-557P-201ENST00000516842 NYAP1Q6ZVC0 841 aa3.62□□□□□ -1.83
RNU6-557P-201ENST00000516842 KRTAP1-3Q8IUG1 177 aa3.62□□□□□ -1.83
RNU6-557P-201ENST00000516842 KCTD17Q8N5Z5 321 aa3.62□□□□□ -1.83
RNU6-557P-201ENST00000516842 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.61□□□□□ -1.83
RNU6-557P-201ENST00000516842 LORP23490 312 aaPredicted RBP3.61□□□□□ -1.83
RNU6-557P-201ENST00000516842 ZNF516Q92618 1163 aa3.61□□□□□ -1.83
RNU6-557P-201ENST00000516842 ZFP91Q96JP5 570 aaPredicted RBP3.61□□□□□ -1.83
RNU6-557P-201ENST00000516842 ZFRQ96KR1 1074 aaKnown RBP3.61□□□□□ -1.83
RNU6-557P-201ENST00000516842 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.61□□□□□ -1.83
RNU6-557P-201ENST00000516842 GMPR2Q9P2T1 348 aaKnown RBP3.61□□□□□ -1.83
RNU6-557P-201ENST00000516842 NLRP6P59044 892 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms