RNA–Protein interactions for RNA: ENST00000516308.1

RNU6-1108P-201, Transcript of RNA, U6 small nuclear 1108, pseudogene, humanhuman

BASIC

Gene RNU6-1108P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1108P-201ENST00000516308 LCE2BO14633 110 aa3.85□□□□□ -1.79
RNU6-1108P-201ENST00000516308 ARHGAP33O14559 1287 aa3.84□□□□□ -1.79
RNU6-1108P-201ENST00000516308 ZNF787Q6DD87 383 aa3.84□□□□□ -1.79
RNU6-1108P-201ENST00000516308 POTEEQ6S8J3 1075 aa3.84□□□□□ -1.79
RNU6-1108P-201ENST00000516308 ZNF775Q96BV0 537 aaPredicted RBP3.84□□□□□ -1.79
RNU6-1108P-201ENST00000516308 STAC3Q96MF2 364 aa3.84□□□□□ -1.79
RNU6-1108P-201ENST00000516308 AXIN2Q9Y2T1 843 aa3.84□□□□□ -1.79
RNU6-1108P-201ENST00000516308 PSDA5PKW4 1024 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1108P-201ENST00000516308 PSEN1P49768 467 aa3.82□□□□□ -1.8
RNU6-1108P-201ENST00000516308 PTPN5P54829 565 aa3.81□□□□□ -1.8
RNU6-1108P-201ENST00000516308 GFRA3O60609 400 aa3.8□□□□□ -1.8
RNU6-1108P-201ENST00000516308 TMEM92Q6UXU6 159 aa3.8□□□□□ -1.8
RNU6-1108P-201ENST00000516308 KHSRPQ92945 711 aaKnown RBP eCLIP3.79□□□□□ -1.8
RNU6-1108P-201ENST00000516308 NRG2O14511 850 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1108P-201ENST00000516308 PDAP1Q13442 181 aaKnown RBP3.78□□□□□ -1.8
RNU6-1108P-201ENST00000516308 MICALL2Q8IY33 904 aa3.78□□□□□ -1.8
RNU6-1108P-201ENST00000516308 STK17AQ9UEE5 414 aa3.78□□□□□ -1.8
RNU6-1108P-201ENST00000516308 ITGBL1O95965 494 aaPredicted RBP3.77□□□□□ -1.81
RNU6-1108P-201ENST00000516308 CHRM1P11229 460 aaPredicted RBP3.77□□□□□ -1.81
RNU6-1108P-201ENST00000516308 CABP2Q9NPB3 220 aa3.77□□□□□ -1.81
RNU6-1108P-201ENST00000516308 LHX6Q9UPM6 363 aa3.77□□□□□ -1.81
RNU6-1108P-201ENST00000516308 NUDT7P0C024 238 aa3.76□□□□□ -1.81
RNU6-1108P-201ENST00000516308 THSD4Q6ZMP0 1018 aa3.76□□□□□ -1.81
RNU6-1108P-201ENST00000516308 EHMT2Q96KQ7 1210 aa3.75□□□□□ -1.81
RNU6-1108P-201ENST00000516308 GSE1Q14687 1217 aa3.74□□□□□ -1.81
RNU6-1108P-201ENST00000516308 KCNH8Q96L42 1107 aa3.74□□□□□ -1.81
RNU6-1108P-201ENST00000516308 DMRTA1Q5VZB9 504 aa3.73□□□□□ -1.81
RNU6-1108P-201ENST00000516308 SLC34A2O95436 690 aa3.71□□□□□ -1.82
RNU6-1108P-201ENST00000516308 TREML4Q6UXN2 200 aa3.71□□□□□ -1.82
RNU6-1108P-201ENST00000516308 PSEN2P49810 448 aa3.7□□□□□ -1.82
RNU6-1108P-201ENST00000516308 GOLGA8CPA6NN73 597 aa3.69□□□□□ -1.82
RNU6-1108P-201ENST00000516308 LCE2AQ5TA79 106 aaPredicted RBP3.69□□□□□ -1.82
RNU6-1108P-201ENST00000516308 WNT2BQ93097 391 aa3.69□□□□□ -1.82
RNU6-1108P-201ENST00000516308 PCDHGA4Q9Y5G9 962 aa3.69□□□□□ -1.82
RNU6-1108P-201ENST00000516308 INSM1Q01101 510 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1108P-201ENST00000516308 PPP4R3BQ5MIZ7 849 aa3.68□□□□□ -1.82
RNU6-1108P-201ENST00000516308 NYAP1Q6ZVC0 841 aa3.68□□□□□ -1.82
RNU6-1108P-201ENST00000516308 SLC4A5Q9BY07 1137 aa3.68□□□□□ -1.82
RNU6-1108P-201ENST00000516308 VPS9D1Q9Y2B5 631 aa3.68□□□□□ -1.82
RNU6-1108P-201ENST00000516308 KCNC4Q03721 635 aa3.67□□□□□ -1.82
RNU6-1108P-201ENST00000516308 SUZ12Q15022 739 aaKnown RBP3.66□□□□□ -1.82
RNU6-1108P-201ENST00000516308 BHMG1C9JSJ3 638 aaPredicted RBP3.65□□□□□ -1.83
RNU6-1108P-201ENST00000516308 MRPL50Q8N5N7 158 aaKnown RBP3.65□□□□□ -1.83
RNU6-1108P-201ENST00000516308 V9GY48 417 aaPredicted RBP3.65□□□□□ -1.83
RNU6-1108P-201ENST00000516308 SOX12O15370 315 aa3.64□□□□□ -1.83
RNU6-1108P-201ENST00000516308 WIPF1O43516 503 aa3.64□□□□□ -1.83
RNU6-1108P-201ENST00000516308 EFCAB3Q8N7B9 438 aa3.64□□□□□ -1.83
RNU6-1108P-201ENST00000516308 KCNK17Q96T54 332 aa3.64□□□□□ -1.83
RNU6-1108P-201ENST00000516308 KIF3CO14782 793 aa3.63□□□□□ -1.83
RNU6-1108P-201ENST00000516308 NBPF3Q9H094 633 aa3.63□□□□□ -1.83
RNU6-1108P-201ENST00000516308 PRKD2Q9BZL6 878 aa3.62□□□□□ -1.83
RNU6-1108P-201ENST00000516308 PDZRN3Q9UPQ7 1066 aa3.62□□□□□ -1.83
RNU6-1108P-201ENST00000516308 KDM4FA0A1W2PPD8 638 aa3.61□□□□□ -1.83
RNU6-1108P-201ENST00000516308 FAM181BA6NEQ2 426 aa3.61□□□□□ -1.83
RNU6-1108P-201ENST00000516308 WFS1O76024 890 aa3.6□□□□□ -1.83
RNU6-1108P-201ENST00000516308 ANKK1Q8NFD2 765 aa3.6□□□□□ -1.83
RNU6-1108P-201ENST00000516308 MS4A4AQ96JQ5 239 aa3.59□□□□□ -1.83
RNU6-1108P-201ENST00000516308 C2orf72A6NCS6 295 aa3.58□□□□□ -1.84
RNU6-1108P-201ENST00000516308 PTCD2Q8WV60 388 aaKnown RBP3.57□□□□□ -1.84
RNU6-1108P-201ENST00000516308 DGAT1O75907 488 aa3.56□□□□□ -1.84
RNU6-1108P-201ENST00000516308 MYT1Q01538 1121 aa3.56□□□□□ -1.84
RNU6-1108P-201ENST00000516308 PKDCCQ504Y2 493 aa3.56□□□□□ -1.84
RNU6-1108P-201ENST00000516308 BCL2L12Q9HB09 334 aa3.56□□□□□ -1.84
RNU6-1108P-201ENST00000516308 POTECB2RU33 542 aa3.55□□□□□ -1.84
RNU6-1108P-201ENST00000516308 ZBED2Q9BTP6 218 aa3.55□□□□□ -1.84
RNU6-1108P-201ENST00000516308 SOWAHBA6NEL2 793 aa3.54□□□□□ -1.84
RNU6-1108P-201ENST00000516308 PTPREP23469 700 aa3.54□□□□□ -1.84
RNU6-1108P-201ENST00000516308 TMC2Q8TDI7 906 aa3.54□□□□□ -1.84
RNU6-1108P-201ENST00000516308 TBC1D12O60347 775 aa3.53□□□□□ -1.84
RNU6-1108P-201ENST00000516308 PHF8Q9UPP1 1060 aa3.53□□□□□ -1.84
RNU6-1108P-201ENST00000516308 NLRP6P59044 892 aa3.52□□□□□ -1.85
RNU6-1108P-201ENST00000516308 NFX1Q12986 1120 aaKnown RBP3.52□□□□□ -1.85
RNU6-1108P-201ENST00000516308 LAPTM4BQ86VI4 370 aa3.52□□□□□ -1.85
RNU6-1108P-201ENST00000516308 BCAMP50895 628 aa3.51□□□□□ -1.85
RNU6-1108P-201ENST00000516308 KRTAP4-8Q9BYQ9 185 aa3.51□□□□□ -1.85
RNU6-1108P-201ENST00000516308 ANO8Q9HCE9 1232 aaPredicted RBP3.51□□□□□ -1.85
RNU6-1108P-201ENST00000516308 WBP1LQ9NX94 342 aa3.51□□□□□ -1.85
RNU6-1108P-201ENST00000516308 PPP1R18Q6NYC8 613 aa3.5□□□□□ -1.85
RNU6-1108P-201ENST00000516308 KLHL34Q8N239 644 aa3.5□□□□□ -1.85
RNU6-1108P-201ENST00000516308 CSRNP3Q8WYN3 585 aa3.5□□□□□ -1.85
RNU6-1108P-201ENST00000516308 RABGEF1Q9UJ41 708 aa3.5□□□□□ -1.85
RNU6-1108P-201ENST00000516308 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.49□□□□□ -1.85
RNU6-1108P-201ENST00000516308 PRR20EP86478 221 aa3.48□□□□□ -1.85
RNU6-1108P-201ENST00000516308 PRR20CP86479 221 aa3.48□□□□□ -1.85
RNU6-1108P-201ENST00000516308 PRR20DP86480 221 aa3.48□□□□□ -1.85
RNU6-1108P-201ENST00000516308 PRR20BP86481 221 aa3.48□□□□□ -1.85
RNU6-1108P-201ENST00000516308 PRR20AP86496 221 aa3.48□□□□□ -1.85
RNU6-1108P-201ENST00000516308 ZNF454Q8N9F8 522 aa3.48□□□□□ -1.85
RNU6-1108P-201ENST00000516308 TRIM41Q8WV44 630 aa3.48□□□□□ -1.85
RNU6-1108P-201ENST00000516308 GGCXP38435 758 aa3.47□□□□□ -1.85
RNU6-1108P-201ENST00000516308 TSR3Q9UJK0 312 aaKnown RBP3.47□□□□□ -1.85
RNU6-1108P-201ENST00000516308 FBXO3Q9UK99 471 aa3.47□□□□□ -1.85
RNU6-1108P-201ENST00000516308 TRIM67Q6ZTA4 783 aa3.46□□□□□ -1.86
RNU6-1108P-201ENST00000516308 FBXO22Q8NEZ5 403 aa3.46□□□□□ -1.86
RNU6-1108P-201ENST00000516308 ZFRQ96KR1 1074 aaKnown RBP3.46□□□□□ -1.86
RNU6-1108P-201ENST00000516308 TJAP1Q5JTD0 557 aa3.45□□□□□ -1.86
RNU6-1108P-201ENST00000516308 XP32Q5T750 250 aa3.45□□□□□ -1.86
RNU6-1108P-201ENST00000516308 AAASQ9NRG9 546 aa3.45□□□□□ -1.86
RNU6-1108P-201ENST00000516308 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1108P-201ENST00000516308 FOSBP53539 338 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms