RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 DRC7Q8IY82 874 aa14.06□□□□□ -0.16
TRIM41-209ENST00000515834 MSH5O43196 834 aa14.06□□□□□ -0.16
TRIM41-209ENST00000515834 SIN3AQ96ST3 1273 aa14.06□□□□□ -0.16
TRIM41-209ENST00000515834 ERICH6BQ5W0A0 696 aa14.05□□□□□ -0.16
TRIM41-209ENST00000515834 ANO8Q9HCE9 1232 aaPredicted RBP14.04□□□□□ -0.16
TRIM41-209ENST00000515834 BAZ1BQ9UIG0 1483 aaKnown RBP14.04□□□□□ -0.16
TRIM41-209ENST00000515834 RB1CC1Q8TDY2 1594 aa14.03□□□□□ -0.16
TRIM41-209ENST00000515834 GTF2E1P29083 439 aaPredicted RBP14.03□□□□□ -0.16
TRIM41-209ENST00000515834 KIAA1211Q6ZU35 1233 aa14.02□□□□□ -0.16
TRIM41-209ENST00000515834 NUTM2DQ5VT03 806 aaPredicted RBP14.02□□□□□ -0.16
TRIM41-209ENST00000515834 NUTM2FA1L443 756 aa14.02□□□□□ -0.17
TRIM41-209ENST00000515834 KIAA2012Q0VF49 1180 aa14.02□□□□□ -0.17
TRIM41-209ENST00000515834 NAP1L5Q96NT1 182 aaPredicted RBP14.02□□□□□ -0.17
TRIM41-209ENST00000515834 HSCBQ8IWL3 235 aa14.01□□□□□ -0.17
TRIM41-209ENST00000515834 GOLGA3Q08378 1498 aa14.01□□□□□ -0.17
TRIM41-209ENST00000515834 FRAT2O75474 233 aaPredicted RBP14.01□□□□□ -0.17
TRIM41-209ENST00000515834 KIF27Q86VH2 1401 aa14.01□□□□□ -0.17
TRIM41-209ENST00000515834 LTV1Q96GA3 475 aaPredicted RBP14.01□□□□□ -0.17
TRIM41-209ENST00000515834 VPS53Q5VIR6 699 aa14.01□□□□□ -0.17
TRIM41-209ENST00000515834 NOC3LQ8WTT2 800 aaKnown RBP13.99□□□□□ -0.17
TRIM41-209ENST00000515834 EID1Q9Y6B2 187 aa13.99□□□□□ -0.17
TRIM41-209ENST00000515834 MEX3CQ5U5Q3 659 aaKnown RBP13.98□□□□□ -0.17
TRIM41-209ENST00000515834 NGDNQ8NEJ9 315 aaKnown RBP13.98□□□□□ -0.17
TRIM41-209ENST00000515834 B4GALNT3Q6L9W6 998 aa13.98□□□□□ -0.17
TRIM41-209ENST00000515834 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
TRIM41-209ENST00000515834 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
TRIM41-209ENST00000515834 HSP90B1P14625 803 aaKnown RBP13.96□□□□□ -0.17
TRIM41-209ENST00000515834 U2AF1L5P0DN76 240 aaPredicted RBP13.96□□□□□ -0.17
TRIM41-209ENST00000515834 U2AF1Q01081 240 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRIM41-209ENST00000515834 CHAF1AQ13111 956 aaPredicted RBP13.96□□□□□ -0.17
TRIM41-209ENST00000515834 KRI1Q8N9T8 703 aaKnown RBP13.96□□□□□ -0.18
TRIM41-209ENST00000515834 CEP162Q5TB80 1403 aa13.96□□□□□ -0.18
TRIM41-209ENST00000515834 RASSF8Q8NHQ8 419 aa13.95□□□□□ -0.18
TRIM41-209ENST00000515834 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
TRIM41-209ENST00000515834 CREBRFQ8IUR6 639 aa13.94□□□□□ -0.18
TRIM41-209ENST00000515834 TOMM22Q9NS69 142 aa13.94□□□□□ -0.18
TRIM41-209ENST00000515834 EVA1CP58658 441 aa13.94□□□□□ -0.18
TRIM41-209ENST00000515834 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
TRIM41-209ENST00000515834 ITPRIPQ8IWB1 547 aa13.93□□□□□ -0.18
TRIM41-209ENST00000515834 SPAG9O60271 1321 aaKnown RBP13.93□□□□□ -0.18
TRIM41-209ENST00000515834 L1TD1Q5T7N2 865 aaKnown RBP13.93□□□□□ -0.18
TRIM41-209ENST00000515834 FOXD1Q16676 465 aa13.93□□□□□ -0.18
TRIM41-209ENST00000515834 DCAF1Q9Y4B6 1507 aa13.93□□□□□ -0.18
TRIM41-209ENST00000515834 STK31Q9BXU1 1019 aa13.92□□□□□ -0.18
TRIM41-209ENST00000515834 AMPHP49418 695 aa13.92□□□□□ -0.18
TRIM41-209ENST00000515834 SLC4A10Q6U841 1118 aa13.92□□□□□ -0.18
TRIM41-209ENST00000515834 MARCH6O60337 910 aa13.91□□□□□ -0.18
TRIM41-209ENST00000515834 IPO8O15397 1037 aaKnown RBP13.91□□□□□ -0.18
TRIM41-209ENST00000515834 WWC1Q8IX03 1113 aa13.91□□□□□ -0.18
TRIM41-209ENST00000515834 TRIM6-TRIM34B2RNG4 842 aa13.9□□□□□ -0.18
TRIM41-209ENST00000515834 RAD21O60216 631 aa13.9□□□□□ -0.18
TRIM41-209ENST00000515834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRIM41-209ENST00000515834 GPATCH3Q96I76 525 aa13.89□□□□□ -0.19
TRIM41-209ENST00000515834 PKD2Q13563 968 aa13.89□□□□□ -0.19
TRIM41-209ENST00000515834 PPP4R2Q9NY27 417 aa13.88□□□□□ -0.19
TRIM41-209ENST00000515834 CALD1Q05682 793 aaKnown RBP13.88□□□□□ -0.19
TRIM41-209ENST00000515834 KIF3BO15066 747 aa13.88□□□□□ -0.19
TRIM41-209ENST00000515834 FBXW7Q969H0 707 aa13.86□□□□□ -0.19
TRIM41-209ENST00000515834 NOL8Q76FK4 1167 aaKnown RBP13.86□□□□□ -0.19
TRIM41-209ENST00000515834 MSNP26038 577 aaKnown RBP13.86□□□□□ -0.19
TRIM41-209ENST00000515834 ROCK2O75116 1388 aaKnown RBP13.85□□□□□ -0.19
TRIM41-209ENST00000515834 A0A0U1RQG5 324 aaPredicted RBP13.85□□□□□ -0.19
TRIM41-209ENST00000515834 SYTL4Q96C24 671 aaPredicted RBP13.85□□□□□ -0.19
TRIM41-209ENST00000515834 NGEFQ8N5V2 710 aa13.84□□□□□ -0.19
TRIM41-209ENST00000515834 WASHC2CQ9Y4E1 1318 aa13.84□□□□□ -0.19
TRIM41-209ENST00000515834 CTDP1Q9Y5B0 961 aaPredicted RBP13.84□□□□□ -0.19
TRIM41-209ENST00000515834 CFAP44Q96MT7 982 aa13.84□□□□□ -0.19
TRIM41-209ENST00000515834 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
TRIM41-209ENST00000515834 EEA1Q15075 1411 aa13.83□□□□□ -0.19
TRIM41-209ENST00000515834 TRIM34Q9BYJ4 488 aa13.83□□□□□ -0.19
TRIM41-209ENST00000515834 KTN1Q86UP2 1357 aaKnown RBP13.83□□□□□ -0.2
TRIM41-209ENST00000515834 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
TRIM41-209ENST00000515834 EFCAB2Q5VUJ9 269 aa13.83□□□□□ -0.2
TRIM41-209ENST00000515834 CWC22Q9HCG8 908 aaKnown RBP13.82□□□□□ -0.2
TRIM41-209ENST00000515834 CUX2O14529 1486 aa13.82□□□□□ -0.2
TRIM41-209ENST00000515834 CARMIL2Q6F5E8 1435 aa13.82□□□□□ -0.2
TRIM41-209ENST00000515834 NOP58Q9Y2X3 529 aaKnown RBP13.82□□□□□ -0.2
TRIM41-209ENST00000515834 CEP89Q96ST8 783 aa13.82□□□□□ -0.2
TRIM41-209ENST00000515834 HTATSF1O43719 755 aaKnown RBP13.81□□□□□ -0.2
TRIM41-209ENST00000515834 CEP164Q9UPV0 1460 aa13.81□□□□□ -0.2
TRIM41-209ENST00000515834 TCEAL9Q9UHQ7 104 aa13.81□□□□□ -0.2
TRIM41-209ENST00000515834 TERF2IPQ9NYB0 399 aa13.81□□□□□ -0.2
TRIM41-209ENST00000515834 CARMIL1Q5VZK9 1371 aa13.81□□□□□ -0.2
TRIM41-209ENST00000515834 SMC4Q9NTJ3 1288 aa13.8□□□□□ -0.2
TRIM41-209ENST00000515834 TPM4P67936 248 aa13.8□□□□□ -0.2
TRIM41-209ENST00000515834 CCDC146Q8IYE0 955 aa13.8□□□□□ -0.2
TRIM41-209ENST00000515834 DCAF8L1A6NGE4 600 aa13.8□□□□□ -0.2
TRIM41-209ENST00000515834 CHMP4AQ9BY43 222 aa13.79□□□□□ -0.2
TRIM41-209ENST00000515834 HSPA5P11021 654 aaKnown RBP13.79□□□□□ -0.2
TRIM41-209ENST00000515834 HNRNPMP52272 730 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRIM41-209ENST00000515834 PES1O00541 588 aaKnown RBP13.79□□□□□ -0.2
TRIM41-209ENST00000515834 C1orf141Q5JVX7 400 aa13.78□□□□□ -0.2
TRIM41-209ENST00000515834 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
TRIM41-209ENST00000515834 SAMD1Q6SPF0 538 aaPredicted RBP13.78□□□□□ -0.2
TRIM41-209ENST00000515834 CCDC34Q96HJ3 373 aa13.78□□□□□ -0.2
TRIM41-209ENST00000515834 GZF1Q9H116 711 aaPredicted RBP13.78□□□□□ -0.2
TRIM41-209ENST00000515834 ARID3AQ99856 593 aa13.78□□□□□ -0.2
TRIM41-209ENST00000515834 NUP155O75694 1391 aa13.77□□□□□ -0.2
TRIM41-209ENST00000515834 RWDD1Q9H446 243 aaPredicted RBP13.77□□□□□ -0.21
TRIM41-209ENST00000515834 FOXD4L1Q9NU39 408 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms