RNA–Protein interactions for RNA: ENST00000515070.1

ABCC3-215, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-215ENST00000515070 ARHGAP5Q13017 1502 aa13.72□□□□□ -0.21
ABCC3-215ENST00000515070 GPATCH8Q9UKJ3 1502 aaKnown RBP13.71□□□□□ -0.21
ABCC3-215ENST00000515070 MYO5CQ9NQX4 1742 aa13.71□□□□□ -0.21
ABCC3-215ENST00000515070 RAPGEF3O95398 923 aa13.71□□□□□ -0.21
ABCC3-215ENST00000515070 ADGRL1O94910 1474 aa13.71□□□□□ -0.21
ABCC3-215ENST00000515070 SCAPERQ9BY12 1400 aa13.71□□□□□ -0.22
ABCC3-215ENST00000515070 PLEKHH2Q8IVE3 1493 aa13.69□□□□□ -0.22
ABCC3-215ENST00000515070 MAGI2Q86UL8 1455 aa13.68□□□□□ -0.22
ABCC3-215ENST00000515070 KIAA1107Q9UPP5 1409 aa13.68□□□□□ -0.22
ABCC3-215ENST00000515070 KANK4Q5T7N3 995 aaPredicted RBP13.68□□□□□ -0.22
ABCC3-215ENST00000515070 RSPH4AQ5TD94 716 aa13.68□□□□□ -0.22
ABCC3-215ENST00000515070 PREX2Q70Z35 1606 aa13.68□□□□□ -0.22
ABCC3-215ENST00000515070 NCOA2Q15596 1464 aa13.67□□□□□ -0.22
ABCC3-215ENST00000515070 SUPT6HQ7KZ85 1726 aaKnown RBP13.67□□□□□ -0.22
ABCC3-215ENST00000515070 ZNF518AQ6AHZ1 1483 aa13.67□□□□□ -0.22
ABCC3-215ENST00000515070 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
ABCC3-215ENST00000515070 ZNF777Q9ULD5 760 aaPredicted RBP13.66□□□□□ -0.22
ABCC3-215ENST00000515070 CDC42BPBQ9Y5S2 1711 aa13.64□□□□□ -0.23
ABCC3-215ENST00000515070 MIA2Q96PC5 1412 aa13.64□□□□□ -0.23
ABCC3-215ENST00000515070 AFAP1Q8N556 730 aa13.63□□□□□ -0.23
ABCC3-215ENST00000515070 ZMYM4Q5VZL5 1548 aa13.63□□□□□ -0.23
ABCC3-215ENST00000515070 CDC42BPAQ5VT25 1732 aa13.62□□□□□ -0.23
ABCC3-215ENST00000515070 ITSN2Q9NZM3 1697 aa13.62□□□□□ -0.23
ABCC3-215ENST00000515070 ABCC1P33527 1531 aa13.61□□□□□ -0.23
ABCC3-215ENST00000515070 MYOM3Q5VTT5 1437 aa13.61□□□□□ -0.23
ABCC3-215ENST00000515070 MLH3Q9UHC1 1453 aa13.6□□□□□ -0.23
ABCC3-215ENST00000515070 RICTORQ6R327 1708 aa13.59□□□□□ -0.23
ABCC3-215ENST00000515070 FRMPD1Q5SYB0 1578 aa13.59□□□□□ -0.23
ABCC3-215ENST00000515070 HNRNPMP52272 730 aaKnown RBP eCLIP13.59□□□□□ -0.23
ABCC3-215ENST00000515070 KDM5CP41229 1560 aa13.58□□□□□ -0.23
ABCC3-215ENST00000515070 TRAPPC8Q9Y2L5 1435 aa13.58□□□□□ -0.24
ABCC3-215ENST00000515070 MYT1LQ9UL68 1186 aa13.58□□□□□ -0.24
ABCC3-215ENST00000515070 ARHGEF12Q9NZN5 1544 aa13.58□□□□□ -0.24
ABCC3-215ENST00000515070 SPAG9O60271 1321 aaKnown RBP13.58□□□□□ -0.24
ABCC3-215ENST00000515070 SAMD9LQ8IVG5 1584 aa13.58□□□□□ -0.24
ABCC3-215ENST00000515070 TSPY4P0CV99 314 aa13.57□□□□□ -0.24
ABCC3-215ENST00000515070 TSPY10P0CW01 314 aa13.57□□□□□ -0.24
ABCC3-215ENST00000515070 ZFYVE16Q7Z3T8 1539 aa13.57□□□□□ -0.24
ABCC3-215ENST00000515070 ZNF644Q9H582 1327 aaPredicted RBP13.57□□□□□ -0.24
ABCC3-215ENST00000515070 ATP10AO60312 1499 aa13.56□□□□□ -0.24
ABCC3-215ENST00000515070 MBD5Q9P267 1494 aa13.55□□□□□ -0.24
ABCC3-215ENST00000515070 SYCP2Q9BX26 1530 aa13.55□□□□□ -0.24
ABCC3-215ENST00000515070 RTEL1-TNFRSF6BF6WH68 1400 aa13.55□□□□□ -0.24
ABCC3-215ENST00000515070 ARHGEF40Q8TER5 1519 aa13.54□□□□□ -0.24
ABCC3-215ENST00000515070 ARID4BQ4LE39 1312 aaPredicted RBP13.54□□□□□ -0.24
ABCC3-215ENST00000515070 YEATS2Q9ULM3 1422 aa13.54□□□□□ -0.24
ABCC3-215ENST00000515070 CAMSAP2Q08AD1 1489 aa13.54□□□□□ -0.24
ABCC3-215ENST00000515070 C9orf84Q5VXU9 1444 aa13.53□□□□□ -0.24
ABCC3-215ENST00000515070 CCDC141Q6ZP82 1450 aa13.53□□□□□ -0.24
ABCC3-215ENST00000515070 HECW2Q9P2P5 1572 aa13.53□□□□□ -0.24
ABCC3-215ENST00000515070 FGD6Q6ZV73 1430 aa13.52□□□□□ -0.25
ABCC3-215ENST00000515070 KDM4FA0A1W2PPD8 638 aa13.51□□□□□ -0.25
ABCC3-215ENST00000515070 AEBP2Q6ZN18 517 aaPredicted RBP13.51□□□□□ -0.25
ABCC3-215ENST00000515070 ARHGEF5Q12774 1597 aa13.5□□□□□ -0.25
ABCC3-215ENST00000515070 REREQ9P2R6 1566 aa13.49□□□□□ -0.25
ABCC3-215ENST00000515070 TCOF1Q13428 1488 aaKnown RBP13.48□□□□□ -0.25
ABCC3-215ENST00000515070 ATP7AQ04656 1500 aa13.48□□□□□ -0.25
ABCC3-215ENST00000515070 PPP6R1Q9UPN7 881 aa13.47□□□□□ -0.25
ABCC3-215ENST00000515070 AGLP35573 1532 aa13.47□□□□□ -0.25
ABCC3-215ENST00000515070 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.46□□□□□ -0.25
ABCC3-215ENST00000515070 DHX29Q7Z478 1369 aaKnown RBP13.45□□□□□ -0.26
ABCC3-215ENST00000515070 DIP2CQ9Y2E4 1556 aa13.45□□□□□ -0.26
ABCC3-215ENST00000515070 PTPN23Q9H3S7 1636 aa13.45□□□□□ -0.26
ABCC3-215ENST00000515070 KIDINS220Q9ULH0 1771 aa13.45□□□□□ -0.26
ABCC3-215ENST00000515070 INO80Q9ULG1 1556 aaPredicted RBP13.45□□□□□ -0.26
ABCC3-215ENST00000515070 A2MP01023 1474 aa13.44□□□□□ -0.26
ABCC3-215ENST00000515070 SHANK2Q9UPX8 1470 aa13.44□□□□□ -0.26
ABCC3-215ENST00000515070 FAM50AQ14320 339 aaKnown RBP13.44□□□□□ -0.26
ABCC3-215ENST00000515070 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
ABCC3-215ENST00000515070 MAST1Q9Y2H9 1570 aa13.42□□□□□ -0.26
ABCC3-215ENST00000515070 ABCC5O15440 1437 aa13.42□□□□□ -0.26
ABCC3-215ENST00000515070 ESF1Q9H501 851 aaKnown RBP13.42□□□□□ -0.26
ABCC3-215ENST00000515070 DAPK1P53355 1430 aa13.41□□□□□ -0.26
ABCC3-215ENST00000515070 BCORL1Q5H9F3 1711 aa13.4□□□□□ -0.26
ABCC3-215ENST00000515070 MLECQ14165 292 aa13.4□□□□□ -0.26
ABCC3-215ENST00000515070 PPARGC1BQ86YN6 1023 aaKnown RBP13.4□□□□□ -0.26
ABCC3-215ENST00000515070 ANKRD30AQ9BXX3 1397 aa13.4□□□□□ -0.26
ABCC3-215ENST00000515070 ADAMTSL3P82987 1691 aa13.39□□□□□ -0.27
ABCC3-215ENST00000515070 CNTLNQ9NXG0 1405 aa13.39□□□□□ -0.27
ABCC3-215ENST00000515070 ADGBQ8N7X0 1667 aa13.38□□□□□ -0.27
ABCC3-215ENST00000515070 PLXNC1O60486 1568 aa13.38□□□□□ -0.27
ABCC3-215ENST00000515070 DNMT1P26358 1616 aaKnown RBP13.38□□□□□ -0.27
ABCC3-215ENST00000515070 RRBP1Q9P2E9 1410 aaKnown RBP13.38□□□□□ -0.27
ABCC3-215ENST00000515070 PTPRMP28827 1452 aa13.36□□□□□ -0.27
ABCC3-215ENST00000515070 KIF15Q9NS87 1388 aa13.36□□□□□ -0.27
ABCC3-215ENST00000515070 DUOX2Q9NRD8 1548 aa13.36□□□□□ -0.27
ABCC3-215ENST00000515070 KIF3BO15066 747 aa13.36□□□□□ -0.27
ABCC3-215ENST00000515070 GGT6Q6P531 493 aa13.36□□□□□ -0.27
ABCC3-215ENST00000515070 NCOA1Q15788 1441 aa13.36□□□□□ -0.27
ABCC3-215ENST00000515070 ROCK1Q13464 1354 aa13.35□□□□□ -0.27
ABCC3-215ENST00000515070 RRP7BPQ9NSQ0 103 aa13.35□□□□□ -0.27
ABCC3-215ENST00000515070 ADGRL2O95490 1459 aa13.35□□□□□ -0.27
ABCC3-215ENST00000515070 ERBINQ96RT1 1412 aa13.34□□□□□ -0.27
ABCC3-215ENST00000515070 CHIC2Q9UKJ5 165 aa13.34□□□□□ -0.27
ABCC3-215ENST00000515070 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
ABCC3-215ENST00000515070 SIGLEC1Q9BZZ2 1709 aa13.33□□□□□ -0.28
ABCC3-215ENST00000515070 WASHC2CQ9Y4E1 1318 aa13.32□□□□□ -0.28
ABCC3-215ENST00000515070 MADDQ8WXG6 1647 aa13.31□□□□□ -0.28
ABCC3-215ENST00000515070 CROCC2H7BZ55 1655 aa13.31□□□□□ -0.28
ABCC3-215ENST00000515070 EIF2AK4Q9P2K8 1649 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms