RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	PPP1R37	O75864	691 aa		13.1	□□□□□ -0.31
HIPK1-210	ENST00000514621	POTEG	Q6S5H5	508 aa		13.1	□□□□□ -0.31
HIPK1-210	ENST00000514621	HOXB3	P14651	431 aa	Predicted RBP	13.04	□□□□□ -0.32
HIPK1-210	ENST00000514621	BBX	Q8WY36	941 aa	Predicted RBP	13.03	□□□□□ -0.32
HIPK1-210	ENST00000514621	KIF3C	O14782	793 aa		12.98	□□□□□ -0.33
HIPK1-210	ENST00000514621	GTPBP6	O43824	516 aa	Predicted RBP	12.97	□□□□□ -0.33
HIPK1-210	ENST00000514621	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.97	□□□□□ -0.33
HIPK1-210	ENST00000514621	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.96	□□□□□ -0.34
HIPK1-210	ENST00000514621	C2orf72	A6NCS6	295 aa		12.95	□□□□□ -0.34
HIPK1-210	ENST00000514621	DOK7	Q18PE1	504 aa		12.95	□□□□□ -0.34
HIPK1-210	ENST00000514621	MARVELD3	Q96A59	401 aa		12.93	□□□□□ -0.34
HIPK1-210	ENST00000514621	NACAD	O15069	1562 aa		12.92	□□□□□ -0.34
HIPK1-210	ENST00000514621	ZNF710	Q8N1W2	664 aa		12.91	□□□□□ -0.34
HIPK1-210	ENST00000514621	TMC2	Q8TDI7	906 aa		12.91	□□□□□ -0.34
HIPK1-210	ENST00000514621	RB1CC1	Q8TDY2	1594 aa		12.9	□□□□□ -0.34
HIPK1-210	ENST00000514621	EMP3	P54852	163 aa		12.88	□□□□□ -0.35
HIPK1-210	ENST00000514621	RIMBP2	O15034	1052 aa		12.87	□□□□□ -0.35
HIPK1-210	ENST00000514621	SPRYD3	Q8NCJ5	442 aa		12.87	□□□□□ -0.35
HIPK1-210	ENST00000514621	MYO15B	Q96JP2	1530 aa		12.87	□□□□□ -0.35
HIPK1-210	ENST00000514621	HOXB1	P14653	301 aa	Predicted RBP	12.86	□□□□□ -0.35
HIPK1-210	ENST00000514621	DCAF1	Q9Y4B6	1507 aa		12.85	□□□□□ -0.35
HIPK1-210	ENST00000514621	ZSWIM6	Q9HCJ5	1215 aa		12.85	□□□□□ -0.35
HIPK1-210	ENST00000514621	PCDH10	Q9P2E7	1040 aa		12.85	□□□□□ -0.35
HIPK1-210	ENST00000514621	GPHN	Q9NQX3	736 aa	Predicted RBP	12.82	□□□□□ -0.36
HIPK1-210	ENST00000514621	GPR153	Q6NV75	609 aa		12.81	□□□□□ -0.36
HIPK1-210	ENST00000514621	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.81	□□□□□ -0.36
HIPK1-210	ENST00000514621	CDAN1	Q8IWY9	1227 aa		12.81	□□□□□ -0.36
HIPK1-210	ENST00000514621	CFAP44	Q96MT7	982 aa		12.79	□□□□□ -0.36
HIPK1-210	ENST00000514621	FAM205C	A6NFA0	338 aa		12.78	□□□□□ -0.36
HIPK1-210	ENST00000514621	FOXK1	P85037	733 aa		12.78	□□□□□ -0.36
HIPK1-210	ENST00000514621	CRISPLD2	Q9H0B8	497 aa		12.78	□□□□□ -0.36
HIPK1-210	ENST00000514621	POTEB3	A0JP26	581 aa		12.77	□□□□□ -0.37
HIPK1-210	ENST00000514621	SLC34A2	O95436	690 aa		12.77	□□□□□ -0.37
HIPK1-210	ENST00000514621	DSG2	Q14126	1118 aa		12.77	□□□□□ -0.37
HIPK1-210	ENST00000514621	ARSI	Q5FYB1	569 aa		12.77	□□□□□ -0.37
HIPK1-210	ENST00000514621	POTEB	Q6S5H4	581 aa		12.77	□□□□□ -0.37
HIPK1-210	ENST00000514621	HS3ST6	Q96QI5	342 aa		12.77	□□□□□ -0.37
HIPK1-210	ENST00000514621	NCKAP5L	Q9HCH0	1330 aa		12.76	□□□□□ -0.37
HIPK1-210	ENST00000514621	PLPP6	Q8IY26	295 aa		12.75	□□□□□ -0.37
HIPK1-210	ENST00000514621	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.74	□□□□□ -0.37
HIPK1-210	ENST00000514621	ERBB3	P21860	1342 aa		12.71	□□□□□ -0.37
HIPK1-210	ENST00000514621	PDE4A	P27815	886 aa		12.71	□□□□□ -0.37
HIPK1-210	ENST00000514621	PCDHGA4	Q9Y5G9	962 aa		12.71	□□□□□ -0.37
HIPK1-210	ENST00000514621	CADPS2	Q86UW7	1296 aa		12.7	□□□□□ -0.38
HIPK1-210	ENST00000514621	VARS2	Q5ST30	1063 aa	Known RBP	12.68	□□□□□ -0.38
HIPK1-210	ENST00000514621	PPP1R15B	Q5SWA1	713 aa		12.68	□□□□□ -0.38
HIPK1-210	ENST00000514621	NUDT7	P0C024	238 aa		12.66	□□□□□ -0.38
HIPK1-210	ENST00000514621	PTCD2	Q8WV60	388 aa	Known RBP	12.66	□□□□□ -0.38
HIPK1-210	ENST00000514621	PLSCR2	Q9NRY7	297 aa		12.66	□□□□□ -0.38
HIPK1-210	ENST00000514621	MFSD10	Q14728	455 aa		12.64	□□□□□ -0.39
HIPK1-210	ENST00000514621	LARP6	Q9BRS8	491 aa	Known RBP	12.64	□□□□□ -0.39
HIPK1-210	ENST00000514621	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.63	□□□□□ -0.39
HIPK1-210	ENST00000514621	KRTAP3-3	Q9BYR6	98 aa		12.63	□□□□□ -0.39
HIPK1-210	ENST00000514621	KRTAP3-2	Q9BYR7	98 aa		12.63	□□□□□ -0.39
HIPK1-210	ENST00000514621	DDX27	Q96GQ7	796 aa	Known RBP	12.62	□□□□□ -0.39
HIPK1-210	ENST00000514621	KDM4F	A0A1W2PPD8	638 aa		12.61	□□□□□ -0.39
HIPK1-210	ENST00000514621	OXER1	Q8TDS5	423 aa		12.6	□□□□□ -0.39
HIPK1-210	ENST00000514621	LHX6	Q9UPM6	363 aa		12.59	□□□□□ -0.39
HIPK1-210	ENST00000514621	PLCB2	Q00722	1185 aa		12.58	□□□□□ -0.4
HIPK1-210	ENST00000514621	UNC13A	Q9UPW8	1703 aa		12.58	□□□□□ -0.4
HIPK1-210	ENST00000514621	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.57	□□□□□ -0.4
HIPK1-210	ENST00000514621	SCRIB	Q14160	1630 aa		12.56	□□□□□ -0.4
HIPK1-210	ENST00000514621	ZNF687	Q8N1G0	1237 aa		12.56	□□□□□ -0.4
HIPK1-210	ENST00000514621	TBC1D12	O60347	775 aa		12.55	□□□□□ -0.4
HIPK1-210	ENST00000514621	BICRA	Q9NZM4	1560 aa		12.52	□□□□□ -0.4
HIPK1-210	ENST00000514621	TSHZ2	Q9NRE2	1034 aa		12.52	□□□□□ -0.41
HIPK1-210	ENST00000514621	SPNS2	Q8IVW8	549 aa		12.5	□□□□□ -0.41
HIPK1-210	ENST00000514621	EMILIN3	Q9NT22	766 aa		12.5	□□□□□ -0.41
HIPK1-210	ENST00000514621	WDR70	Q9NW82	654 aa		12.48	□□□□□ -0.41
HIPK1-210	ENST00000514621	PSD	A5PKW4	1024 aa	Predicted RBP	12.47	□□□□□ -0.41
HIPK1-210	ENST00000514621	CAMK2B	Q13554	666 aa		12.46	□□□□□ -0.41
HIPK1-210	ENST00000514621	POTEE	Q6S8J3	1075 aa		12.44	□□□□□ -0.42
HIPK1-210	ENST00000514621	PBX2	P40425	430 aa		12.43	□□□□□ -0.42
HIPK1-210	ENST00000514621	EVI5	O60447	810 aa		12.42	□□□□□ -0.42
HIPK1-210	ENST00000514621	MAP3K9	P80192	1104 aa		12.41	□□□□□ -0.42
HIPK1-210	ENST00000514621	MMRN1	Q13201	1228 aa		12.41	□□□□□ -0.42
HIPK1-210	ENST00000514621	PPP4R3B	Q5MIZ7	849 aa		12.41	□□□□□ -0.42
HIPK1-210	ENST00000514621	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.4	□□□□□ -0.42
HIPK1-210	ENST00000514621	AXIN2	Q9Y2T1	843 aa		12.4	□□□□□ -0.42
HIPK1-210	ENST00000514621	HAP1	P54257	671 aa	Predicted RBP	12.39	□□□□□ -0.43
HIPK1-210	ENST00000514621	LSM11	P83369	360 aa	Known RBP eCLIP	12.39	□□□□□ -0.43
HIPK1-210	ENST00000514621	E2F4	Q16254	413 aa		12.38	□□□□□ -0.43
HIPK1-210	ENST00000514621	SHROOM4	Q9ULL8	1493 aa		12.38	□□□□□ -0.43
HIPK1-210	ENST00000514621	DPYSL4	O14531	572 aa		12.36	□□□□□ -0.43
HIPK1-210	ENST00000514621	FOSB	P53539	338 aa		12.36	□□□□□ -0.43
HIPK1-210	ENST00000514621	ZNF454	Q8N9F8	522 aa		12.36	□□□□□ -0.43
HIPK1-210	ENST00000514621	ARHGAP33	O14559	1287 aa		12.35	□□□□□ -0.43
HIPK1-210	ENST00000514621	JPH4	Q96JJ6	628 aa		12.35	□□□□□ -0.43
HIPK1-210	ENST00000514621	ANKRD13D	Q6ZTN6	518 aa		12.34	□□□□□ -0.43
HIPK1-210	ENST00000514621	PSEN2	P49810	448 aa		12.31	□□□□□ -0.44
HIPK1-210	ENST00000514621	DMRTA1	Q5VZB9	504 aa		12.29	□□□□□ -0.44
HIPK1-210	ENST00000514621	KCNK17	Q96T54	332 aa		12.29	□□□□□ -0.44
HIPK1-210	ENST00000514621	BCL2L12	Q9HB09	334 aa		12.29	□□□□□ -0.44
HIPK1-210	ENST00000514621	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.27	□□□□□ -0.45
HIPK1-210	ENST00000514621	PCDHGA10	Q9Y5H3	936 aa		12.27	□□□□□ -0.45
HIPK1-210	ENST00000514621	PDIA6	Q15084	440 aa		12.26	□□□□□ -0.45
HIPK1-210	ENST00000514621	ZDHHC16	Q969W1	377 aa		12.26	□□□□□ -0.45
HIPK1-210	ENST00000514621	ADAM33	Q9BZ11	813 aa		12.26	□□□□□ -0.45
HIPK1-210	ENST00000514621	PTGER2	P43116	358 aa		12.25	□□□□□ -0.45
HIPK1-210	ENST00000514621	ADGRD1	Q6QNK2	874 aa		12.25	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms