RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 LRRIQ1Q96JM4 1722 aa25.97■■□□□ 1.75
SNCAIP-220ENST00000514497 ATP1B4Q9UN42 357 aaPredicted RBP25.95■■□□□ 1.74
SNCAIP-220ENST00000514497 TIAM1Q13009 1591 aa25.93■■□□□ 1.74
SNCAIP-220ENST00000514497 POGZQ7Z3K3 1410 aa25.91■■□□□ 1.74
SNCAIP-220ENST00000514497 RICTORQ6R327 1708 aa25.89■■□□□ 1.74
SNCAIP-220ENST00000514497 CDK11AQ9UQ88 783 aaPredicted RBP25.89■■□□□ 1.74
SNCAIP-220ENST00000514497 FANCAO15360 1455 aa25.89■■□□□ 1.73
SNCAIP-220ENST00000514497 FER1L4A9Z1Z3 1794 aa25.87■■□□□ 1.73
SNCAIP-220ENST00000514497 DENND4BO75064 1496 aaPredicted RBP25.85■■□□□ 1.73
SNCAIP-220ENST00000514497 SIGLEC1Q9BZZ2 1709 aa25.84■■□□□ 1.73
SNCAIP-220ENST00000514497 CDK13Q14004 1512 aaKnown RBP25.83■■□□□ 1.73
SNCAIP-220ENST00000514497 AKNAQ7Z591 1439 aa25.83■■□□□ 1.73
SNCAIP-220ENST00000514497 PREX1Q8TCU6 1659 aa25.82■■□□□ 1.72
SNCAIP-220ENST00000514497 TTC37Q6PGP7 1564 aa25.82■■□□□ 1.72
SNCAIP-220ENST00000514497 LRRC9Q6ZRR7 1453 aa25.8■■□□□ 1.72
SNCAIP-220ENST00000514497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.8■■□□□ 1.72
SNCAIP-220ENST00000514497 MLECQ14165 292 aa25.8■■□□□ 1.72
SNCAIP-220ENST00000514497 HNRNPUL2Q1KMD3 747 aaKnown RBP25.8■■□□□ 1.72
SNCAIP-220ENST00000514497 STRCQ7RTU9 1775 aa25.78■■□□□ 1.72
SNCAIP-220ENST00000514497 DMRT2Q9Y5R5 561 aa25.78■■□□□ 1.72
SNCAIP-220ENST00000514497 YEATS2Q9ULM3 1422 aa25.78■■□□□ 1.72
SNCAIP-220ENST00000514497 ZFYVE16Q7Z3T8 1539 aa25.78■■□□□ 1.72
SNCAIP-220ENST00000514497 EHBP1L1Q8N3D4 1523 aa25.78■■□□□ 1.72
SNCAIP-220ENST00000514497 PLEKHD1A6NEE1 506 aa25.77■■□□□ 1.72
SNCAIP-220ENST00000514497 MTUS2Q5JR59 1369 aa25.76■■□□□ 1.71
SNCAIP-220ENST00000514497 ZMYM4Q5VZL5 1548 aa25.75■■□□□ 1.71
SNCAIP-220ENST00000514497 CFAP74Q9C0B2 1584 aa25.74■■□□□ 1.71
SNCAIP-220ENST00000514497 TROQ12816 1431 aaPredicted RBP25.73■■□□□ 1.71
SNCAIP-220ENST00000514497 KANK4Q5T7N3 995 aaPredicted RBP25.71■■□□□ 1.71
SNCAIP-220ENST00000514497 SUPT6HQ7KZ85 1726 aaKnown RBP25.7■■□□□ 1.7
SNCAIP-220ENST00000514497 MAGI2Q86UL8 1455 aa25.68■■□□□ 1.7
SNCAIP-220ENST00000514497 ARHGEF12Q9NZN5 1544 aa25.65■■□□□ 1.7
SNCAIP-220ENST00000514497 KIF14Q15058 1648 aa25.64■■□□□ 1.7
SNCAIP-220ENST00000514497 CEBPAP49715 358 aaPredicted RBP25.64■■□□□ 1.7
SNCAIP-220ENST00000514497 UHRF1BP1Q6BDS2 1440 aa25.62■■□□□ 1.69
SNCAIP-220ENST00000514497 SETD1BQ9UPS6 1966 aaKnown RBP25.61■■□□□ 1.69
SNCAIP-220ENST00000514497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.6■■□□□ 1.69
SNCAIP-220ENST00000514497 PTPRTO14522 1441 aa25.58■■□□□ 1.69
SNCAIP-220ENST00000514497 NCOA2Q15596 1464 aa25.58■■□□□ 1.69
SNCAIP-220ENST00000514497 LTBP4Q8N2S1 1624 aa25.56■■□□□ 1.68
SNCAIP-220ENST00000514497 ATP10AO60312 1499 aa25.55■■□□□ 1.68
SNCAIP-220ENST00000514497 IQSEC2Q5JU85 1478 aa25.55■■□□□ 1.68
SNCAIP-220ENST00000514497 C9orf84Q5VXU9 1444 aa25.54■■□□□ 1.68
SNCAIP-220ENST00000514497 PPARGC1BQ86YN6 1023 aaKnown RBP25.53■■□□□ 1.68
SNCAIP-220ENST00000514497 SCAPERQ9BY12 1400 aa25.52■■□□□ 1.68
SNCAIP-220ENST00000514497 ITSN2Q9NZM3 1697 aa25.52■■□□□ 1.68
SNCAIP-220ENST00000514497 CCNB3Q8WWL7 1395 aa25.48■■□□□ 1.67
SNCAIP-220ENST00000514497 MYOM3Q5VTT5 1437 aa25.47■■□□□ 1.67
SNCAIP-220ENST00000514497 MYO5CQ9NQX4 1742 aa25.47■■□□□ 1.67
SNCAIP-220ENST00000514497 CDC42BPAQ5VT25 1732 aa25.46■■□□□ 1.67
SNCAIP-220ENST00000514497 MIA2Q96PC5 1412 aa25.46■■□□□ 1.67
SNCAIP-220ENST00000514497 GPATCH8Q9UKJ3 1502 aaKnown RBP25.43■■□□□ 1.66
SNCAIP-220ENST00000514497 C3P01024 1663 aa25.43■■□□□ 1.66
SNCAIP-220ENST00000514497 PREX2Q70Z35 1606 aa25.43■■□□□ 1.66
SNCAIP-220ENST00000514497 PLCH2O75038 1416 aa25.4■■□□□ 1.66
SNCAIP-220ENST00000514497 FGD6Q6ZV73 1430 aa25.39■■□□□ 1.66
SNCAIP-220ENST00000514497 RRBP1Q9P2E9 1410 aaKnown RBP25.39■■□□□ 1.66
SNCAIP-220ENST00000514497 CDC42BPBQ9Y5S2 1711 aa25.39■■□□□ 1.65
SNCAIP-220ENST00000514497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.38■■□□□ 1.65
SNCAIP-220ENST00000514497 UBAP1LF5GYI3 381 aa25.37■■□□□ 1.65
SNCAIP-220ENST00000514497 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
SNCAIP-220ENST00000514497 CFDP1Q9UEE9 299 aaPredicted RBP25.35■■□□□ 1.65
SNCAIP-220ENST00000514497 TRIM26Q12899 539 aaPredicted RBP25.33■■□□□ 1.65
SNCAIP-220ENST00000514497 TRAPPC8Q9Y2L5 1435 aa25.32■■□□□ 1.64
SNCAIP-220ENST00000514497 EFCAB2Q5VUJ9 269 aa25.32■■□□□ 1.64
SNCAIP-220ENST00000514497 PTPN23Q9H3S7 1636 aa25.32■■□□□ 1.64
SNCAIP-220ENST00000514497 TCOF1Q13428 1488 aaKnown RBP25.32■■□□□ 1.64
SNCAIP-220ENST00000514497 ZNF518AQ6AHZ1 1483 aa25.32■■□□□ 1.64
SNCAIP-220ENST00000514497 ESF1Q9H501 851 aaKnown RBP25.31■■□□□ 1.64
SNCAIP-220ENST00000514497 MYT1LQ9UL68 1186 aa25.31■■□□□ 1.64
SNCAIP-220ENST00000514497 ARHGAP5Q13017 1502 aa25.31■■□□□ 1.64
SNCAIP-220ENST00000514497 DIP2CQ9Y2E4 1556 aa25.29■■□□□ 1.64
SNCAIP-220ENST00000514497 CAMSAP1Q5T5Y3 1602 aa25.29■■□□□ 1.64
SNCAIP-220ENST00000514497 PLEKHH2Q8IVE3 1493 aa25.28■■□□□ 1.64
SNCAIP-220ENST00000514497 KDM5CP41229 1560 aa25.28■■□□□ 1.64
SNCAIP-220ENST00000514497 REREQ9P2R6 1566 aa25.27■■□□□ 1.64
SNCAIP-220ENST00000514497 ZNF335Q9H4Z2 1342 aaPredicted RBP25.27■■□□□ 1.64
SNCAIP-220ENST00000514497 MED1Q15648 1581 aaPredicted RBP25.27■■□□□ 1.64
SNCAIP-220ENST00000514497 AFAP1Q8N556 730 aa25.26■■□□□ 1.63
SNCAIP-220ENST00000514497 CAMSAP2Q08AD1 1489 aa25.23■■□□□ 1.63
SNCAIP-220ENST00000514497 ABCA6Q8N139 1617 aa25.23■■□□□ 1.63
SNCAIP-220ENST00000514497 KIAA1107Q9UPP5 1409 aa25.22■■□□□ 1.63
SNCAIP-220ENST00000514497 SAMD9LQ8IVG5 1584 aa25.22■■□□□ 1.63
SNCAIP-220ENST00000514497 RSPH4AQ5TD94 716 aa25.21■■□□□ 1.63
SNCAIP-220ENST00000514497 AGLP35573 1532 aa25.21■■□□□ 1.63
SNCAIP-220ENST00000514497 NCKAP5LQ9HCH0 1330 aa25.2■■□□□ 1.62
SNCAIP-220ENST00000514497 FAM50AQ14320 339 aaKnown RBP25.2■■□□□ 1.62
SNCAIP-220ENST00000514497 ARHGEF5Q12774 1597 aa25.18■■□□□ 1.62
SNCAIP-220ENST00000514497 ZNF777Q9ULD5 760 aaPredicted RBP25.17■■□□□ 1.62
SNCAIP-220ENST00000514497 CNTLNQ9NXG0 1405 aa25.17■■□□□ 1.62
SNCAIP-220ENST00000514497 ABCC1P33527 1531 aa25.16■■□□□ 1.62
SNCAIP-220ENST00000514497 DNMT1P26358 1616 aaKnown RBP25.15■■□□□ 1.62
SNCAIP-220ENST00000514497 SCAF1Q9H7N4 1312 aaKnown RBP25.15■■□□□ 1.62
SNCAIP-220ENST00000514497 HSPA1LP34931 641 aa25.15■■□□□ 1.62
SNCAIP-220ENST00000514497 MLH3Q9UHC1 1453 aa25.15■■□□□ 1.62
SNCAIP-220ENST00000514497 ZNF644Q9H582 1327 aaPredicted RBP25.14■■□□□ 1.62
SNCAIP-220ENST00000514497 NPATQ14207 1427 aa25.13■■□□□ 1.61
SNCAIP-220ENST00000514497 MBD5Q9P267 1494 aa25.12■■□□□ 1.61
SNCAIP-220ENST00000514497 MROH2AA6NES4 1674 aa25.12■■□□□ 1.61
SNCAIP-220ENST00000514497 PHF23Q9BUL5 403 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms