RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 NISCHQ9Y2I1 1504 aa38.91■■■■□ 3.82
SNCAIP-220ENST00000514497 ABCC9O60706 1549 aa35.93■■■■□ 3.34
SNCAIP-220ENST00000514497 CCDC180Q9P1Z9 1646 aa34.98■■■■□ 3.19
SNCAIP-220ENST00000514497 DNAJC5BQ9UF47 199 aa34.55■■■■□ 3.12
SNCAIP-220ENST00000514497 RB1CC1Q8TDY2 1594 aa33.77■■■■□ 3
SNCAIP-220ENST00000514497 PABPN1Q86U42 306 aaKnown RBP eCLIP33.28■■■□□ 2.92
SNCAIP-220ENST00000514497 NACADO15069 1562 aa33.28■■■□□ 2.92
SNCAIP-220ENST00000514497 UNC13AQ9UPW8 1703 aa33.07■■■□□ 2.88
SNCAIP-220ENST00000514497 DCAF8L2P0C7V8 631 aa32.94■■■□□ 2.86
SNCAIP-220ENST00000514497 BICRAQ9NZM4 1560 aa32.81■■■□□ 2.84
SNCAIP-220ENST00000514497 ZCCHC6Q5VYS8 1495 aaKnown RBP32.56■■■□□ 2.8
SNCAIP-220ENST00000514497 CECR2Q9BXF3 1484 aa32.46■■■□□ 2.79
SNCAIP-220ENST00000514497 DNAJC5Q9H3Z4 198 aa32.45■■■□□ 2.79
SNCAIP-220ENST00000514497 MYO15BQ96JP2 1530 aa32.45■■■□□ 2.78
SNCAIP-220ENST00000514497 CC2D2AQ9P2K1 1620 aa32.42■■■□□ 2.78
SNCAIP-220ENST00000514497 DCAF1Q9Y4B6 1507 aa32.34■■■□□ 2.77
SNCAIP-220ENST00000514497 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
SNCAIP-220ENST00000514497 EIF4G1Q04637 1599 aaKnown RBP32.1■■■□□ 2.73
SNCAIP-220ENST00000514497 SCRIBQ14160 1630 aa31.82■■■□□ 2.69
SNCAIP-220ENST00000514497 CUX2O14529 1486 aa31.35■■■□□ 2.61
SNCAIP-220ENST00000514497 ERCC6Q03468 1493 aa31.11■■■□□ 2.57
SNCAIP-220ENST00000514497 NCAPD3P42695 1498 aa30.71■■■□□ 2.51
SNCAIP-220ENST00000514497 TRIM41Q8WV44 630 aa30.67■■■□□ 2.5
SNCAIP-220ENST00000514497 NESP48681 1621 aa30.58■■■□□ 2.49
SNCAIP-220ENST00000514497 ATAD2BQ9ULI0 1458 aa30.49■■■□□ 2.47
SNCAIP-220ENST00000514497 THOC2Q8NI27 1593 aaKnown RBP30.48■■■□□ 2.47
SNCAIP-220ENST00000514497 HMGXB3Q12766 1538 aa30.41■■■□□ 2.46
SNCAIP-220ENST00000514497 SMARCA2P51531 1590 aa30.37■■■□□ 2.45
SNCAIP-220ENST00000514497 SMARCA4P51532 1647 aa30.24■■■□□ 2.43
SNCAIP-220ENST00000514497 KIF21AQ7Z4S6 1674 aa30.21■■■□□ 2.43
SNCAIP-220ENST00000514497 LAMC3Q9Y6N6 1575 aa30.21■■■□□ 2.43
SNCAIP-220ENST00000514497 BAZ1BQ9UIG0 1483 aaKnown RBP30.17■■■□□ 2.42
SNCAIP-220ENST00000514497 BAZ1AQ9NRL2 1556 aaPredicted RBP30.15■■■□□ 2.42
SNCAIP-220ENST00000514497 PDS5BQ9NTI5 1447 aa30.05■■■□□ 2.4
SNCAIP-220ENST00000514497 MROH2BQ7Z745 1585 aa29.94■■■□□ 2.38
SNCAIP-220ENST00000514497 PEG3Q9GZU2 1588 aa29.92■■■□□ 2.38
SNCAIP-220ENST00000514497 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
SNCAIP-220ENST00000514497 MRC2Q9UBG0 1479 aa29.87■■■□□ 2.37
SNCAIP-220ENST00000514497 WDR62O43379 1518 aa29.82■■■□□ 2.36
SNCAIP-220ENST00000514497 OSCARQ8IYS5 282 aa29.76■■■□□ 2.35
SNCAIP-220ENST00000514497 CADPSQ9ULU8 1353 aa29.73■■■□□ 2.35
SNCAIP-220ENST00000514497 WIZO95785 1651 aa29.67■■■□□ 2.34
SNCAIP-220ENST00000514497 SUPT5HO00267 1087 aaKnown RBP29.57■■■□□ 2.32
SNCAIP-220ENST00000514497 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
SNCAIP-220ENST00000514497 RIMBP3CA6NJZ7 1639 aa29.53■■■□□ 2.32
SNCAIP-220ENST00000514497 RIMBP3BA6NNM3 1639 aa29.53■■■□□ 2.32
SNCAIP-220ENST00000514497 RIMBP3Q9UFD9 1639 aa29.53■■■□□ 2.32
SNCAIP-220ENST00000514497 TOP2AP11388 1531 aaKnown RBP29.45■■■□□ 2.3
SNCAIP-220ENST00000514497 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
SNCAIP-220ENST00000514497 ARHGEF11O15085 1522 aa29.3■■■□□ 2.28
SNCAIP-220ENST00000514497 URB2Q14146 1524 aaKnown RBP29.24■■■□□ 2.27
SNCAIP-220ENST00000514497 CFTRP13569 1480 aa29.19■■■□□ 2.26
SNCAIP-220ENST00000514497 TRHP20396 242 aaPredicted RBP29.18■■■□□ 2.26
SNCAIP-220ENST00000514497 CYB5RLQ6IPT4 315 aa29.16■■■□□ 2.26
SNCAIP-220ENST00000514497 AEBP2Q6ZN18 517 aaPredicted RBP29.07■■■□□ 2.24
SNCAIP-220ENST00000514497 CCDC88BA6NC98 1476 aa29.05■■■□□ 2.24
SNCAIP-220ENST00000514497 ZNF608Q9ULD9 1512 aaPredicted RBP29.04■■■□□ 2.24
SNCAIP-220ENST00000514497 IFT140Q96RY7 1462 aa28.98■■■□□ 2.23
SNCAIP-220ENST00000514497 ARAP1Q96P48 1450 aa28.93■■■□□ 2.22
SNCAIP-220ENST00000514497 PRDM2Q13029 1718 aa28.91■■■□□ 2.22
SNCAIP-220ENST00000514497 CHD1O14646 1710 aa28.88■■■□□ 2.21
SNCAIP-220ENST00000514497 EIF4G3O43432 1585 aaKnown RBP28.87■■■□□ 2.21
SNCAIP-220ENST00000514497 TOPBP1Q92547 1522 aa28.75■■■□□ 2.19
SNCAIP-220ENST00000514497 FBLN2P98095 1184 aa28.7■■■□□ 2.18
SNCAIP-220ENST00000514497 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.18
SNCAIP-220ENST00000514497 ABCC8Q09428 1581 aa28.62■■■□□ 2.17
SNCAIP-220ENST00000514497 TARBP1Q13395 1621 aaKnown RBP28.58■■■□□ 2.17
SNCAIP-220ENST00000514497 DNMBPQ6XZF7 1577 aa28.57■■■□□ 2.16
SNCAIP-220ENST00000514497 CLASP1Q7Z460 1538 aa28.45■■■□□ 2.15
SNCAIP-220ENST00000514497 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
SNCAIP-220ENST00000514497 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
SNCAIP-220ENST00000514497 SNAPC4Q5SXM2 1469 aa28.34■■■□□ 2.13
SNCAIP-220ENST00000514497 TDRD9Q8NDG6 1382 aaKnown RBP28.33■■■□□ 2.13
SNCAIP-220ENST00000514497 CHMP7Q8WUX9 453 aaPredicted RBP28.31■■■□□ 2.12
SNCAIP-220ENST00000514497 RAD54L2Q9Y4B4 1467 aa28.31■■■□□ 2.12
SNCAIP-220ENST00000514497 SOGA1O94964 1423 aa28.25■■■□□ 2.11
SNCAIP-220ENST00000514497 GAPVD1Q14C86 1478 aa28.24■■■□□ 2.11
SNCAIP-220ENST00000514497 WDR97A6NE52 1622 aa28.21■■■□□ 2.11
SNCAIP-220ENST00000514497 MAGI1Q96QZ7 1491 aaPredicted RBP28.21■■■□□ 2.11
SNCAIP-220ENST00000514497 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
SNCAIP-220ENST00000514497 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
SNCAIP-220ENST00000514497 GRIN2BQ13224 1484 aa28.11■■■□□ 2.09
SNCAIP-220ENST00000514497 CHIC1Q5VXU3 224 aa28.09■■■□□ 2.09
SNCAIP-220ENST00000514497 FGD5Q6ZNL6 1462 aa28.08■■■□□ 2.09
SNCAIP-220ENST00000514497 TOP2BQ02880 1626 aa28.08■■■□□ 2.09
SNCAIP-220ENST00000514497 BIVM-ERCC5R4GMW8 1640 aa28.08■■■□□ 2.09
SNCAIP-220ENST00000514497 CUX1P39880 1505 aa28.05■■■□□ 2.08
SNCAIP-220ENST00000514497 PBRM1Q86U86 1689 aa28■■■□□ 2.07
SNCAIP-220ENST00000514497 ERCC6L2Q5T890 1561 aa27.95■■■□□ 2.07
SNCAIP-220ENST00000514497 KIF13AQ9H1H9 1805 aa27.95■■■□□ 2.06
SNCAIP-220ENST00000514497 ILDR1Q86SU0 546 aaPredicted RBP27.9■■■□□ 2.06
SNCAIP-220ENST00000514497 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
SNCAIP-220ENST00000514497 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
SNCAIP-220ENST00000514497 GRIN2AQ12879 1464 aa27.76■■■□□ 2.03
SNCAIP-220ENST00000514497 SHROOM2Q13796 1616 aa27.7■■■□□ 2.03
SNCAIP-220ENST00000514497 KDM4FA0A1W2PPD8 638 aa27.7■■■□□ 2.02
SNCAIP-220ENST00000514497 ABCA10Q8WWZ4 1543 aa27.69■■■□□ 2.02
SNCAIP-220ENST00000514497 NUP160Q12769 1436 aa27.67■■■□□ 2.02
SNCAIP-220ENST00000514497 FAM69CQ0P6D2 419 aa27.64■■■□□ 2.02
SNCAIP-220ENST00000514497 ADAMTS12P58397 1594 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms