RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 KDM5BQ9UGL1 1544 aa17.66■□□□□ 0.42
SDHA-216ENST00000514027 DAPK1P53355 1430 aa17.66■□□□□ 0.42
SDHA-216ENST00000514027 ZNF644Q9H582 1327 aaPredicted RBP17.65■□□□□ 0.42
SDHA-216ENST00000514027 CDK11AQ9UQ88 783 aaPredicted RBP17.65■□□□□ 0.42
SDHA-216ENST00000514027 MAGI1Q96QZ7 1491 aaPredicted RBP17.64■□□□□ 0.42
SDHA-216ENST00000514027 MPHOSPH9Q99550 1183 aa17.64■□□□□ 0.42
SDHA-216ENST00000514027 CEP170Q5SW79 1584 aa17.64■□□□□ 0.41
SDHA-216ENST00000514027 FOXD1Q16676 465 aa17.64■□□□□ 0.41
SDHA-216ENST00000514027 DNMT1P26358 1616 aaKnown RBP17.63■□□□□ 0.41
SDHA-216ENST00000514027 SYNJ2O15056 1496 aa17.62■□□□□ 0.41
SDHA-216ENST00000514027 ABCC5O15440 1437 aa17.61■□□□□ 0.41
SDHA-216ENST00000514027 PLB1Q6P1J6 1458 aa17.61■□□□□ 0.41
SDHA-216ENST00000514027 PRG4Q92954 1404 aaPredicted RBP17.61■□□□□ 0.41
SDHA-216ENST00000514027 ROCK1Q13464 1354 aa17.58■□□□□ 0.41
SDHA-216ENST00000514027 TROQ12816 1431 aaPredicted RBP17.58■□□□□ 0.4
SDHA-216ENST00000514027 CCER2I3L3R5 266 aa17.57■□□□□ 0.4
SDHA-216ENST00000514027 ZNF777Q9ULD5 760 aaPredicted RBP17.56■□□□□ 0.4
SDHA-216ENST00000514027 HSPA5P11021 654 aaKnown RBP17.56■□□□□ 0.4
SDHA-216ENST00000514027 CFDP1Q9UEE9 299 aaPredicted RBP17.56■□□□□ 0.4
SDHA-216ENST00000514027 CARMIL2Q6F5E8 1435 aa17.56■□□□□ 0.4
SDHA-216ENST00000514027 CAMSAP2Q08AD1 1489 aa17.55■□□□□ 0.4
SDHA-216ENST00000514027 KIF14Q15058 1648 aa17.55■□□□□ 0.4
SDHA-216ENST00000514027 ITSN2Q9NZM3 1697 aa17.55■□□□□ 0.4
SDHA-216ENST00000514027 L3MBTL2Q969R5 705 aa17.54■□□□□ 0.4
SDHA-216ENST00000514027 JPH4Q96JJ6 628 aa17.53■□□□□ 0.4
SDHA-216ENST00000514027 SLC4A1APQ9BWU0 796 aaKnown RBP17.53■□□□□ 0.4
SDHA-216ENST00000514027 EIF4G2P78344 907 aaKnown RBP eCLIP17.51■□□□□ 0.39
SDHA-216ENST00000514027 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
SDHA-216ENST00000514027 NUP160Q12769 1436 aa17.51■□□□□ 0.39
SDHA-216ENST00000514027 ANKRD30BQ9BXX2 1392 aa17.5■□□□□ 0.39
SDHA-216ENST00000514027 GPATCH8Q9UKJ3 1502 aaKnown RBP17.5■□□□□ 0.39
SDHA-216ENST00000514027 WASHC2AQ641Q2 1341 aa17.5■□□□□ 0.39
SDHA-216ENST00000514027 ADCY10Q96PN6 1610 aa17.49■□□□□ 0.39
SDHA-216ENST00000514027 ADGBQ8N7X0 1667 aa17.49■□□□□ 0.39
SDHA-216ENST00000514027 RPRD2Q5VT52 1461 aaKnown RBP17.49■□□□□ 0.39
SDHA-216ENST00000514027 PLPPR3Q6T4P5 718 aa17.47■□□□□ 0.39
SDHA-216ENST00000514027 BCANQ96GW7 911 aa17.47■□□□□ 0.39
SDHA-216ENST00000514027 CROCC2H7BZ55 1655 aa17.46■□□□□ 0.39
SDHA-216ENST00000514027 TEX14Q8IWB6 1497 aa17.45■□□□□ 0.38
SDHA-216ENST00000514027 NCOA1Q15788 1441 aa17.45■□□□□ 0.38
SDHA-216ENST00000514027 FKBP8Q14318 412 aa17.44■□□□□ 0.38
SDHA-216ENST00000514027 PLEKHD1A6NEE1 506 aa17.44■□□□□ 0.38
SDHA-216ENST00000514027 NBPF8Q3BBV2 869 aa17.43■□□□□ 0.38
SDHA-216ENST00000514027 PZPP20742 1482 aa17.43■□□□□ 0.38
SDHA-216ENST00000514027 RTN4Q9NQC3 1192 aaKnown RBP17.43■□□□□ 0.38
SDHA-216ENST00000514027 ABCA8O94911 1581 aa17.42■□□□□ 0.38
SDHA-216ENST00000514027 ANKRD30AQ9BXX3 1397 aa17.41■□□□□ 0.38
SDHA-216ENST00000514027 CDC42BPAQ5VT25 1732 aa17.41■□□□□ 0.38
SDHA-216ENST00000514027 ADGRL2O95490 1459 aa17.4■□□□□ 0.38
SDHA-216ENST00000514027 NEFLP07196 543 aa17.4■□□□□ 0.38
SDHA-216ENST00000514027 CNTLNQ9NXG0 1405 aa17.4■□□□□ 0.38
SDHA-216ENST00000514027 ATP10BO94823 1461 aa17.4■□□□□ 0.38
SDHA-216ENST00000514027 C11orf95C9JLR9 678 aaPredicted RBP17.38■□□□□ 0.37
SDHA-216ENST00000514027 CCDC7Q96M83 1385 aa17.37■□□□□ 0.37
SDHA-216ENST00000514027 HNRNPUQ00839 825 aaKnown RBP eCLIP17.37■□□□□ 0.37
SDHA-216ENST00000514027 PKD2Q13563 968 aa17.37■□□□□ 0.37
SDHA-216ENST00000514027 ZNF326Q5BKZ1 582 aaKnown RBP17.37■□□□□ 0.37
SDHA-216ENST00000514027 ANKRD50Q9ULJ7 1429 aa17.37■□□□□ 0.37
SDHA-216ENST00000514027 KIAA1107Q9UPP5 1409 aa17.36■□□□□ 0.37
SDHA-216ENST00000514027 ABCC10Q5T3U5 1492 aa17.36■□□□□ 0.37
SDHA-216ENST00000514027 C9orf84Q5VXU9 1444 aa17.35■□□□□ 0.37
SDHA-216ENST00000514027 RBM19Q9Y4C8 960 aaKnown RBP17.35■□□□□ 0.37
SDHA-216ENST00000514027 CHD1O14646 1710 aa17.33■□□□□ 0.36
SDHA-216ENST00000514027 PTPRGP23470 1445 aa17.32■□□□□ 0.36
SDHA-216ENST00000514027 TSPY4P0CV99 314 aa17.32■□□□□ 0.36
SDHA-216ENST00000514027 TSPY10P0CW01 314 aa17.32■□□□□ 0.36
SDHA-216ENST00000514027 ANO8Q9HCE9 1232 aaPredicted RBP17.31■□□□□ 0.36
SDHA-216ENST00000514027 SHANK2Q9UPX8 1470 aa17.31■□□□□ 0.36
SDHA-216ENST00000514027 NUP155O75694 1391 aa17.31■□□□□ 0.36
SDHA-216ENST00000514027 HNRNPMP52272 730 aaKnown RBP eCLIP17.31■□□□□ 0.36
SDHA-216ENST00000514027 KIF7Q2M1P5 1343 aa17.3■□□□□ 0.36
SDHA-216ENST00000514027 SPATA31E1Q6ZUB1 1445 aa17.29■□□□□ 0.36
SDHA-216ENST00000514027 POLR1AO95602 1720 aaPredicted RBP17.29■□□□□ 0.36
SDHA-216ENST00000514027 CCDC184Q52MB2 194 aa17.29■□□□□ 0.36
SDHA-216ENST00000514027 POLR3GLQ9BT43 218 aa17.28■□□□□ 0.36
SDHA-216ENST00000514027 MBD5Q9P267 1494 aa17.28■□□□□ 0.36
SDHA-216ENST00000514027 PRKRIP1Q9H875 184 aaPredicted RBP17.28■□□□□ 0.36
SDHA-216ENST00000514027 KIF15Q9NS87 1388 aa17.27■□□□□ 0.36
SDHA-216ENST00000514027 MSH5O43196 834 aa17.27■□□□□ 0.36
SDHA-216ENST00000514027 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
SDHA-216ENST00000514027 USP47Q96K76 1375 aa17.25■□□□□ 0.35
SDHA-216ENST00000514027 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
SDHA-216ENST00000514027 MRS2Q9HD23 443 aa17.25■□□□□ 0.35
SDHA-216ENST00000514027 SAMD9LQ8IVG5 1584 aa17.24■□□□□ 0.35
SDHA-216ENST00000514027 MYT1LQ9UL68 1186 aa17.24■□□□□ 0.35
SDHA-216ENST00000514027 CDC42BPBQ9Y5S2 1711 aa17.23■□□□□ 0.35
SDHA-216ENST00000514027 PREX2Q70Z35 1606 aa17.23■□□□□ 0.35
SDHA-216ENST00000514027 ARHGEF5Q12774 1597 aa17.23■□□□□ 0.35
SDHA-216ENST00000514027 CCDC141Q6ZP82 1450 aa17.22■□□□□ 0.35
SDHA-216ENST00000514027 BCORL1Q5H9F3 1711 aa17.2■□□□□ 0.34
SDHA-216ENST00000514027 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
SDHA-216ENST00000514027 KDM2AQ9Y2K7 1162 aa17.2■□□□□ 0.34
SDHA-216ENST00000514027 KDM5CP41229 1560 aa17.19■□□□□ 0.34
SDHA-216ENST00000514027 IRX6P78412 446 aaPredicted RBP17.19■□□□□ 0.34
SDHA-216ENST00000514027 ARHGAP5Q13017 1502 aa17.19■□□□□ 0.34
SDHA-216ENST00000514027 SYCP2Q9BX26 1530 aa17.19■□□□□ 0.34
SDHA-216ENST00000514027 TTC37Q6PGP7 1564 aa17.18■□□□□ 0.34
SDHA-216ENST00000514027 CARD11Q9BXL7 1154 aa17.17■□□□□ 0.34
SDHA-216ENST00000514027 RALGAPBQ86X10 1494 aa17.16■□□□□ 0.34
SDHA-216ENST00000514027 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms