RNA–Protein interactions for RNA: ENST00000513027.3

RACK1-229, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-229ENST00000513027 PTPRKQ15262 1439 aa18.29■□□□□ 0.52
RACK1-229ENST00000513027 NAIPQ13075 1403 aa18.28■□□□□ 0.52
RACK1-229ENST00000513027 PREX2Q70Z35 1606 aa18.27■□□□□ 0.52
RACK1-229ENST00000513027 GCC2Q8IWJ2 1684 aa18.27■□□□□ 0.52
RACK1-229ENST00000513027 PLEKHH2Q8IVE3 1493 aa18.26■□□□□ 0.51
RACK1-229ENST00000513027 ABCC5O15440 1437 aa18.26■□□□□ 0.51
RACK1-229ENST00000513027 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
RACK1-229ENST00000513027 ARAP3Q8WWN8 1544 aa18.25■□□□□ 0.51
RACK1-229ENST00000513027 ARHGEF5Q12774 1597 aa18.24■□□□□ 0.51
RACK1-229ENST00000513027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.23■□□□□ 0.511e-34■■□□□ 13
RACK1-229ENST00000513027 ADGRL2O95490 1459 aa18.23■□□□□ 0.51
RACK1-229ENST00000513027 NPM1P06748 294 aaKnown RBP eCLIP18.23■□□□□ 0.51
RACK1-229ENST00000513027 MYO5CQ9NQX4 1742 aa18.22■□□□□ 0.51
RACK1-229ENST00000513027 KIAA1107Q9UPP5 1409 aa18.22■□□□□ 0.51
RACK1-229ENST00000513027 WDR7Q9Y4E6 1490 aa18.21■□□□□ 0.51
RACK1-229ENST00000513027 CROCC2H7BZ55 1655 aa18.21■□□□□ 0.51
RACK1-229ENST00000513027 ADGBQ8N7X0 1667 aa18.2■□□□□ 0.5
RACK1-229ENST00000513027 TIMELESSQ9UNS1 1208 aa18.2■□□□□ 0.5
RACK1-229ENST00000513027 PLCH2O75038 1416 aa18.2■□□□□ 0.5
RACK1-229ENST00000513027 CDC42BPBQ9Y5S2 1711 aa18.2■□□□□ 0.5
RACK1-229ENST00000513027 ZNF644Q9H582 1327 aaPredicted RBP18.19■□□□□ 0.5
RACK1-229ENST00000513027 ANKRD30AQ9BXX3 1397 aa18.18■□□□□ 0.5
RACK1-229ENST00000513027 TSPY4P0CV99 314 aa18.18■□□□□ 0.5
RACK1-229ENST00000513027 TSPY10P0CW01 314 aa18.18■□□□□ 0.5
RACK1-229ENST00000513027 TTC37Q6PGP7 1564 aa18.17■□□□□ 0.5
RACK1-229ENST00000513027 NCOA1Q15788 1441 aa18.16■□□□□ 0.5
RACK1-229ENST00000513027 EFCAB2Q5VUJ9 269 aa18.16■□□□□ 0.5
RACK1-229ENST00000513027 ZNF777Q9ULD5 760 aaPredicted RBP18.16■□□□□ 0.5
RACK1-229ENST00000513027 ARHGAP5Q13017 1502 aa18.16■□□□□ 0.5
RACK1-229ENST00000513027 CCDC141Q6ZP82 1450 aa18.15■□□□□ 0.5
RACK1-229ENST00000513027 MBD5Q9P267 1494 aa18.14■□□□□ 0.5
RACK1-229ENST00000513027 SAMD9LQ8IVG5 1584 aa18.14■□□□□ 0.49
RACK1-229ENST00000513027 ABCA9Q8IUA7 1624 aa18.14■□□□□ 0.49
RACK1-229ENST00000513027 RRP7BPQ9NSQ0 103 aa18.13■□□□□ 0.49
RACK1-229ENST00000513027 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
RACK1-229ENST00000513027 MAPKBP1O60336 1514 aa18.13■□□□□ 0.49
RACK1-229ENST00000513027 MAST1Q9Y2H9 1570 aa18.13■□□□□ 0.49
RACK1-229ENST00000513027 KCNH8Q96L42 1107 aa18.12■□□□□ 0.49
RACK1-229ENST00000513027 ASXL2Q76L83 1435 aa18.12■□□□□ 0.49
RACK1-229ENST00000513027 C9orf84Q5VXU9 1444 aa18.11■□□□□ 0.49
RACK1-229ENST00000513027 HNRNPMP52272 730 aaKnown RBP eCLIP18.05■□□□□ 0.482e-9■■■□□ 17.5
RACK1-229ENST00000513027 ANKRD50Q9ULJ7 1429 aa18.05■□□□□ 0.48
RACK1-229ENST00000513027 ABCC1P33527 1531 aa18.04■□□□□ 0.48
RACK1-229ENST00000513027 SYCP2Q9BX26 1530 aa18.04■□□□□ 0.48
RACK1-229ENST00000513027 RTEL1-TNFRSF6BF6WH68 1400 aa18.03■□□□□ 0.48
RACK1-229ENST00000513027 PLXNC1O60486 1568 aa18.03■□□□□ 0.48
RACK1-229ENST00000513027 CFAP74Q9C0B2 1584 aa18.03■□□□□ 0.48
RACK1-229ENST00000513027 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.48
RACK1-229ENST00000513027 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.48
RACK1-229ENST00000513027 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.48
RACK1-229ENST00000513027 TRIM52Q96A61 297 aa18.02■□□□□ 0.48
RACK1-229ENST00000513027 FANCAO15360 1455 aa18.01■□□□□ 0.47
RACK1-229ENST00000513027 KIF15Q9NS87 1388 aa18■□□□□ 0.47
RACK1-229ENST00000513027 KDM6BO15054 1643 aa17.99■□□□□ 0.47
RACK1-229ENST00000513027 MPHOSPH9Q99550 1183 aa17.99■□□□□ 0.47
RACK1-229ENST00000513027 KDM5DQ9BY66 1539 aa17.98■□□□□ 0.47
RACK1-229ENST00000513027 DUOX2Q9NRD8 1548 aa17.97■□□□□ 0.47
RACK1-229ENST00000513027 ARHGEF12Q9NZN5 1544 aa17.95■□□□□ 0.46
RACK1-229ENST00000513027 CD109Q6YHK3 1445 aa17.95■□□□□ 0.46
RACK1-229ENST00000513027 GLI2P10070 1586 aa17.95■□□□□ 0.46
RACK1-229ENST00000513027 ERBINQ96RT1 1412 aa17.94■□□□□ 0.46
RACK1-229ENST00000513027 NEO1Q92859 1461 aa17.93■□□□□ 0.46
RACK1-229ENST00000513027 CYB5RLQ6IPT4 315 aa17.92■□□□□ 0.46
RACK1-229ENST00000513027 SLC4A1APQ9BWU0 796 aaKnown RBP17.92■□□□□ 0.46
RACK1-229ENST00000513027 ADGRL1O94910 1474 aa17.92■□□□□ 0.46
RACK1-229ENST00000513027 ZNF316A6NFI3 1004 aaPredicted RBP17.91■□□□□ 0.46
RACK1-229ENST00000513027 SPAG9O60271 1321 aaKnown RBP17.91■□□□□ 0.46
RACK1-229ENST00000513027 TONSLQ96HA7 1378 aa17.91■□□□□ 0.46
RACK1-229ENST00000513027 DENND4BO75064 1496 aaPredicted RBP17.9■□□□□ 0.46
RACK1-229ENST00000513027 PZPP20742 1482 aa17.9■□□□□ 0.46
RACK1-229ENST00000513027 TRAPPC8Q9Y2L5 1435 aa17.89■□□□□ 0.46
RACK1-229ENST00000513027 SCAPERQ9BY12 1400 aa17.89■□□□□ 0.45
RACK1-229ENST00000513027 ZNF518AQ6AHZ1 1483 aa17.88■□□□□ 0.45
RACK1-229ENST00000513027 SIN3AQ96ST3 1273 aa17.88■□□□□ 0.45
RACK1-229ENST00000513027 ANKRD30BQ9BXX2 1392 aa17.88■□□□□ 0.45
RACK1-229ENST00000513027 UNC13BO14795 1591 aa17.87■□□□□ 0.45
RACK1-229ENST00000513027 NEUROD1Q13562 356 aa17.87■□□□□ 0.45
RACK1-229ENST00000513027 NUP155O75694 1391 aa17.87■□□□□ 0.45
RACK1-229ENST00000513027 ZFYVE16Q7Z3T8 1539 aa17.87■□□□□ 0.45
RACK1-229ENST00000513027 INO80Q9ULG1 1556 aaPredicted RBP17.87■□□□□ 0.45
RACK1-229ENST00000513027 PPP1R15AO75807 674 aaPredicted RBP17.85■□□□□ 0.45
RACK1-229ENST00000513027 ATP7AQ04656 1500 aa17.85■□□□□ 0.45
RACK1-229ENST00000513027 MAP3K4Q9Y6R4 1608 aa17.85■□□□□ 0.45
RACK1-229ENST00000513027 RPRD2Q5VT52 1461 aaKnown RBP17.84■□□□□ 0.45
RACK1-229ENST00000513027 MAGI2Q86UL8 1455 aa17.83■□□□□ 0.45
RACK1-229ENST00000513027 EIF2AK4Q9P2K8 1649 aaKnown RBP17.82■□□□□ 0.44
RACK1-229ENST00000513027 MLH3Q9UHC1 1453 aa17.82■□□□□ 0.44
RACK1-229ENST00000513027 AFAP1Q8N556 730 aa17.81■□□□□ 0.44
RACK1-229ENST00000513027 KDM5CP41229 1560 aa17.81■□□□□ 0.44
RACK1-229ENST00000513027 POGZQ7Z3K3 1410 aa17.81■□□□□ 0.44
RACK1-229ENST00000513027 IQGAP3Q86VI3 1631 aa17.8■□□□□ 0.44
RACK1-229ENST00000513027 PKD2Q13563 968 aa17.8■□□□□ 0.44
RACK1-229ENST00000513027 FAM135AQ9P2D6 1515 aa17.8■□□□□ 0.44
RACK1-229ENST00000513027 DHX29Q7Z478 1369 aaKnown RBP17.79■□□□□ 0.44
RACK1-229ENST00000513027 TEX14Q8IWB6 1497 aa17.77■□□□□ 0.44
RACK1-229ENST00000513027 DIP2BQ9P265 1576 aa17.77■□□□□ 0.44
RACK1-229ENST00000513027 DEPDC5O75140 1603 aa17.76■□□□□ 0.43
RACK1-229ENST00000513027 KANK1Q14678 1352 aa17.74■□□□□ 0.43
RACK1-229ENST00000513027 ATP10AO60312 1499 aa17.74■□□□□ 0.43
RACK1-229ENST00000513027 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms