RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 SIGLEC1Q9BZZ2 1709 aa19.62■□□□□ 0.73
CDK7-208ENST00000512687 CCDC18Q5T9S5 1454 aa19.62■□□□□ 0.73
CDK7-208ENST00000512687 ZMYM4Q5VZL5 1548 aa19.61■□□□□ 0.73
CDK7-208ENST00000512687 DENND4BO75064 1496 aaPredicted RBP19.61■□□□□ 0.73
CDK7-208ENST00000512687 PLCH2O75038 1416 aa19.61■□□□□ 0.73
CDK7-208ENST00000512687 CDC42BPAQ5VT25 1732 aa19.6■□□□□ 0.73
CDK7-208ENST00000512687 ADAMTSL3P82987 1691 aa19.6■□□□□ 0.73
CDK7-208ENST00000512687 PREX2Q70Z35 1606 aa19.6■□□□□ 0.73
CDK7-208ENST00000512687 BCORL1Q5H9F3 1711 aa19.59■□□□□ 0.73
CDK7-208ENST00000512687 CDK11AQ9UQ88 783 aaPredicted RBP19.56■□□□□ 0.72
CDK7-208ENST00000512687 ARHGAP5Q13017 1502 aa19.55■□□□□ 0.72
CDK7-208ENST00000512687 POGZQ7Z3K3 1410 aa19.54■□□□□ 0.72
CDK7-208ENST00000512687 ZFYVE16Q7Z3T8 1539 aa19.54■□□□□ 0.72
CDK7-208ENST00000512687 MADDQ8WXG6 1647 aa19.53■□□□□ 0.72
CDK7-208ENST00000512687 ITSN2Q9NZM3 1697 aa19.52■□□□□ 0.72
CDK7-208ENST00000512687 SCAPERQ9BY12 1400 aa19.52■□□□□ 0.72
CDK7-208ENST00000512687 YEATS2Q9ULM3 1422 aa19.52■□□□□ 0.72
CDK7-208ENST00000512687 CEP162Q5TB80 1403 aa19.51■□□□□ 0.71
CDK7-208ENST00000512687 KDM5CP41229 1560 aa19.49■□□□□ 0.71
CDK7-208ENST00000512687 RIMS1Q86UR5 1692 aaKnown RBP19.49■□□□□ 0.71
CDK7-208ENST00000512687 HECW2Q9P2P5 1572 aa19.49■□□□□ 0.71
CDK7-208ENST00000512687 ABCC1P33527 1531 aa19.48■□□□□ 0.71
CDK7-208ENST00000512687 MAGI2Q86UL8 1455 aa19.48■□□□□ 0.71
CDK7-208ENST00000512687 EFCAB2Q5VUJ9 269 aa19.46■□□□□ 0.71
CDK7-208ENST00000512687 SAMD9LQ8IVG5 1584 aa19.44■□□□□ 0.7
CDK7-208ENST00000512687 ZNF518AQ6AHZ1 1483 aa19.44■□□□□ 0.7
CDK7-208ENST00000512687 ARHGEF12Q9NZN5 1544 aa19.44■□□□□ 0.7
CDK7-208ENST00000512687 FER1L4A9Z1Z3 1794 aa19.44■□□□□ 0.7
CDK7-208ENST00000512687 PTPRMP28827 1452 aa19.43■□□□□ 0.7
CDK7-208ENST00000512687 ABCA6Q8N139 1617 aa19.43■□□□□ 0.7
CDK7-208ENST00000512687 DIP2CQ9Y2E4 1556 aa19.42■□□□□ 0.7
CDK7-208ENST00000512687 ARID4BQ4LE39 1312 aaPredicted RBP19.4■□□□□ 0.7
CDK7-208ENST00000512687 EHBP1L1Q8N3D4 1523 aa19.4■□□□□ 0.7
CDK7-208ENST00000512687 KIDINS220Q9ULH0 1771 aa19.39■□□□□ 0.7
CDK7-208ENST00000512687 GPATCH8Q9UKJ3 1502 aaKnown RBP19.39■□□□□ 0.69
CDK7-208ENST00000512687 TIAM1Q13009 1591 aa19.39■□□□□ 0.69
CDK7-208ENST00000512687 LOC105371045A0A1W2PR82 267 aa19.38■□□□□ 0.69
CDK7-208ENST00000512687 TRAPPC8Q9Y2L5 1435 aa19.38■□□□□ 0.69
CDK7-208ENST00000512687 SYCP2Q9BX26 1530 aa19.37■□□□□ 0.69
CDK7-208ENST00000512687 ATP10AO60312 1499 aa19.37■□□□□ 0.69
CDK7-208ENST00000512687 C9orf84Q5VXU9 1444 aa19.37■□□□□ 0.69
CDK7-208ENST00000512687 AFAP1Q8N556 730 aa19.36■□□□□ 0.69
CDK7-208ENST00000512687 REREQ9P2R6 1566 aa19.35■□□□□ 0.69
CDK7-208ENST00000512687 MTUS2Q5JR59 1369 aa19.34■□□□□ 0.69
CDK7-208ENST00000512687 MLH3Q9UHC1 1453 aa19.34■□□□□ 0.69
CDK7-208ENST00000512687 SUPT6HQ7KZ85 1726 aaKnown RBP19.32■□□□□ 0.68
CDK7-208ENST00000512687 INO80Q9ULG1 1556 aaPredicted RBP19.29■□□□□ 0.68
CDK7-208ENST00000512687 VPS8Q8N3P4 1428 aa19.29■□□□□ 0.68
CDK7-208ENST00000512687 CCNB3Q8WWL7 1395 aa19.29■□□□□ 0.68
CDK7-208ENST00000512687 MLECQ14165 292 aa19.27■□□□□ 0.68
CDK7-208ENST00000512687 ZNF777Q9ULD5 760 aaPredicted RBP19.27■□□□□ 0.68
CDK7-208ENST00000512687 LMTK3Q96Q04 1460 aa19.25■□□□□ 0.67
CDK7-208ENST00000512687 AGLP35573 1532 aa19.25■□□□□ 0.67
CDK7-208ENST00000512687 ATP7AQ04656 1500 aa19.25■□□□□ 0.67
CDK7-208ENST00000512687 NCOA2Q15596 1464 aa19.24■□□□□ 0.67
CDK7-208ENST00000512687 PLEKHH2Q8IVE3 1493 aa19.24■□□□□ 0.67
CDK7-208ENST00000512687 MYT1LQ9UL68 1186 aa19.23■□□□□ 0.67
CDK7-208ENST00000512687 KIAA1107Q9UPP5 1409 aa19.23■□□□□ 0.67
CDK7-208ENST00000512687 C3P01024 1663 aa19.23■□□□□ 0.67
CDK7-208ENST00000512687 HNRNPMP52272 730 aaKnown RBP eCLIP19.22■□□□□ 0.672e-9■■■■■ 32.2
CDK7-208ENST00000512687 CFDP1Q9UEE9 299 aaPredicted RBP19.22■□□□□ 0.67
CDK7-208ENST00000512687 ADGBQ8N7X0 1667 aa19.21■□□□□ 0.67
CDK7-208ENST00000512687 PLXNC1O60486 1568 aa19.21■□□□□ 0.67
CDK7-208ENST00000512687 PREX1Q8TCU6 1659 aa19.2■□□□□ 0.66
CDK7-208ENST00000512687 LRRC9Q6ZRR7 1453 aa19.2■□□□□ 0.66
CDK7-208ENST00000512687 MBD5Q9P267 1494 aa19.19■□□□□ 0.66
CDK7-208ENST00000512687 ZNF644Q9H582 1327 aaPredicted RBP19.19■□□□□ 0.66
CDK7-208ENST00000512687 CAMSAP2Q08AD1 1489 aa19.18■□□□□ 0.66
CDK7-208ENST00000512687 MAP3K1Q13233 1512 aa19.17■□□□□ 0.66
CDK7-208ENST00000512687 SPAG9O60271 1321 aaKnown RBP19.16■□□□□ 0.66
CDK7-208ENST00000512687 MROH2AA6NES4 1674 aa19.15■□□□□ 0.66
CDK7-208ENST00000512687 CLTCQ00610 1675 aaKnown RBP19.14■□□□□ 0.65
CDK7-208ENST00000512687 SETD1BQ9UPS6 1966 aaKnown RBP19.13■□□□□ 0.65
CDK7-208ENST00000512687 A2MP01023 1474 aa19.12■□□□□ 0.65
CDK7-208ENST00000512687 ARHGEF5Q12774 1597 aa19.11■□□□□ 0.65
CDK7-208ENST00000512687 CEBPAP49715 358 aaPredicted RBP19.11■□□□□ 0.65
CDK7-208ENST00000512687 CCDC141Q6ZP82 1450 aa19.1■□□□□ 0.65
CDK7-208ENST00000512687 KANK4Q5T7N3 995 aaPredicted RBP19.1■□□□□ 0.65
CDK7-208ENST00000512687 HSPA2P54652 639 aa19.07■□□□□ 0.64
CDK7-208ENST00000512687 RTEL1-TNFRSF6BF6WH68 1400 aa19.07■□□□□ 0.64
CDK7-208ENST00000512687 MSH5O43196 834 aa19.06■□□□□ 0.64
CDK7-208ENST00000512687 STRCQ7RTU9 1775 aa19.06■□□□□ 0.64
CDK7-208ENST00000512687 CROCC2H7BZ55 1655 aa19.05■□□□□ 0.64
CDK7-208ENST00000512687 CNTLNQ9NXG0 1405 aa19.04■□□□□ 0.64
CDK7-208ENST00000512687 MAST1Q9Y2H9 1570 aa19.03■□□□□ 0.64
CDK7-208ENST00000512687 MYOM3Q5VTT5 1437 aa19.03■□□□□ 0.64
CDK7-208ENST00000512687 PTPN23Q9H3S7 1636 aa19■□□□□ 0.63
CDK7-208ENST00000512687 UHRF1BP1Q6BDS2 1440 aa19■□□□□ 0.63
CDK7-208ENST00000512687 MYO3AQ8NEV4 1616 aa18.99■□□□□ 0.63
CDK7-208ENST00000512687 MIA2Q96PC5 1412 aa18.99■□□□□ 0.63
CDK7-208ENST00000512687 ZNF142P52746 1687 aaPredicted RBP18.98■□□□□ 0.63
CDK7-208ENST00000512687 DHX29Q7Z478 1369 aaKnown RBP18.98■□□□□ 0.63
CDK7-208ENST00000512687 ESF1Q9H501 851 aaKnown RBP18.97■□□□□ 0.63
CDK7-208ENST00000512687 RNF17Q9BXT8 1623 aaKnown RBP18.96■□□□□ 0.63
CDK7-208ENST00000512687 ZMYM3Q14202 1370 aa18.95■□□□□ 0.62
CDK7-208ENST00000512687 ILDR1Q86SU0 546 aaPredicted RBP18.95■□□□□ 0.62
CDK7-208ENST00000512687 NPATQ14207 1427 aa18.94■□□□□ 0.62
CDK7-208ENST00000512687 EIF2AK4Q9P2K8 1649 aaKnown RBP18.94■□□□□ 0.62
CDK7-208ENST00000512687 RSPH4AQ5TD94 716 aa18.94■□□□□ 0.62
CDK7-208ENST00000512687 GGT6Q6P531 493 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms