RNA–Protein interactions for RNA: ENST00000511817.1

XRCC4-205, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene XRCC4, Length 1,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-205ENST00000511817 TMEM92Q6UXU6 159 aa8.81□□□□□ -1
XRCC4-205ENST00000511817 VASPP50552 380 aaPredicted RBP8.8□□□□□ -1
XRCC4-205ENST00000511817 A0A0G2JS52 829 aa8.79□□□□□ -1
XRCC4-205ENST00000511817 Q6ZNB5 142 aa8.79□□□□□ -1
XRCC4-205ENST00000511817 MICALL2Q8IY33 904 aa8.79□□□□□ -1
XRCC4-205ENST00000511817 ADGRD1Q6QNK2 874 aa8.78□□□□□ -1
XRCC4-205ENST00000511817 POTEEQ6S8J3 1075 aa8.78□□□□□ -1
XRCC4-205ENST00000511817 EFCAB3Q8N7B9 438 aa8.76□□□□□ -1.01
XRCC4-205ENST00000511817 AXIN2Q9Y2T1 843 aa8.73□□□□□ -1.01
XRCC4-205ENST00000511817 KHSRPQ92945 711 aaKnown RBP eCLIP8.72□□□□□ -1.016e-10■■■□□ 17.2
XRCC4-205ENST00000511817 CIZ1Q9ULV3 898 aaPredicted RBP8.71□□□□□ -1.02
XRCC4-205ENST00000511817 TK2O00142 265 aa8.7□□□□□ -1.02
XRCC4-205ENST00000511817 HRO43593 1189 aa8.69□□□□□ -1.02
XRCC4-205ENST00000511817 KCTD12Q96CX2 325 aaKnown RBP8.69□□□□□ -1.02
XRCC4-205ENST00000511817 SPOCK2Q92563 424 aa8.69□□□□□ -1.02
XRCC4-205ENST00000511817 SOX12O15370 315 aa8.67□□□□□ -1.02
XRCC4-205ENST00000511817 ARHGAP33O14559 1287 aa8.65□□□□□ -1.02
XRCC4-205ENST00000511817 MS4A4AQ96JQ5 239 aa8.65□□□□□ -1.02
XRCC4-205ENST00000511817 TRIM41Q8WV44 630 aa8.62□□□□□ -1.03
XRCC4-205ENST00000511817 LHX6Q9UPM6 363 aa8.62□□□□□ -1.03
XRCC4-205ENST00000511817 NUDT7P0C024 238 aa8.61□□□□□ -1.03
XRCC4-205ENST00000511817 LAPTM4AQ15012 233 aa8.61□□□□□ -1.03
XRCC4-205ENST00000511817 IFNLR1Q8IU57 520 aaPredicted RBP8.59□□□□□ -1.03
XRCC4-205ENST00000511817 PHF8Q9UPP1 1060 aa8.59□□□□□ -1.03
XRCC4-205ENST00000511817 LCE2BO14633 110 aa8.58□□□□□ -1.04
XRCC4-205ENST00000511817 PSDA5PKW4 1024 aaPredicted RBP8.56□□□□□ -1.04
XRCC4-205ENST00000511817 PTPN5P54829 565 aa8.56□□□□□ -1.04
XRCC4-205ENST00000511817 TRAF7Q6Q0C0 670 aa8.56□□□□□ -1.04
XRCC4-205ENST00000511817 STAC3Q96MF2 364 aa8.56□□□□□ -1.04
XRCC4-205ENST00000511817 DMRTA1Q5VZB9 504 aa8.54□□□□□ -1.04
XRCC4-205ENST00000511817 KIF3CO14782 793 aa8.53□□□□□ -1.04
XRCC4-205ENST00000511817 SLC34A2O95436 690 aa8.52□□□□□ -1.05
XRCC4-205ENST00000511817 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.51□□□□□ -1.05
XRCC4-205ENST00000511817 ZFP91Q96JP5 570 aaPredicted RBP8.51□□□□□ -1.05
XRCC4-205ENST00000511817 PCDHGA4Q9Y5G9 962 aa8.51□□□□□ -1.05
XRCC4-205ENST00000511817 RIOK3O14730 519 aaKnown RBP8.51□□□□□ -1.05
XRCC4-205ENST00000511817 NLRP6P59044 892 aa8.51□□□□□ -1.05
XRCC4-205ENST00000511817 C2orf72A6NCS6 295 aa8.49□□□□□ -1.05
XRCC4-205ENST00000511817 VGFO15240 615 aaPredicted RBP8.48□□□□□ -1.05
XRCC4-205ENST00000511817 THSD4Q6ZMP0 1018 aa8.47□□□□□ -1.05
XRCC4-205ENST00000511817 FBXO22Q8NEZ5 403 aa8.47□□□□□ -1.05
XRCC4-205ENST00000511817 PSEN2P49810 448 aa8.47□□□□□ -1.05
XRCC4-205ENST00000511817 RNF25Q96BH1 459 aaPredicted RBP8.45□□□□□ -1.06
XRCC4-205ENST00000511817 ZNF775Q96BV0 537 aaPredicted RBP8.43□□□□□ -1.06
XRCC4-205ENST00000511817 ITGBL1O95965 494 aaPredicted RBP8.42□□□□□ -1.06
XRCC4-205ENST00000511817 LOC100996750A0A140TA64 210 aa8.41□□□□□ -1.06
XRCC4-205ENST00000511817 ZNF787Q6DD87 383 aa8.41□□□□□ -1.06
XRCC4-205ENST00000511817 KRTAP4-6Q9BYQ5 205 aa8.41□□□□□ -1.06
XRCC4-205ENST00000511817 KDM4FA0A1W2PPD8 638 aa8.4□□□□□ -1.06
XRCC4-205ENST00000511817 GFRA3O60609 400 aa8.4□□□□□ -1.07
XRCC4-205ENST00000511817 MFRPQ9BY79 579 aa8.38□□□□□ -1.07
XRCC4-205ENST00000511817 VPS9D1Q9Y2B5 631 aa8.38□□□□□ -1.07
XRCC4-205ENST00000511817 TMC2Q8TDI7 906 aa8.36□□□□□ -1.07
XRCC4-205ENST00000511817 KCNH8Q96L42 1107 aa8.36□□□□□ -1.07
XRCC4-205ENST00000511817 NRG2O14511 850 aaPredicted RBP8.36□□□□□ -1.07
XRCC4-205ENST00000511817 PPP4R3BQ5MIZ7 849 aa8.36□□□□□ -1.07
XRCC4-205ENST00000511817 BCL11BQ9C0K0 894 aaPredicted RBP8.35□□□□□ -1.07
XRCC4-205ENST00000511817 PTCD2Q8WV60 388 aaKnown RBP8.34□□□□□ -1.07
XRCC4-205ENST00000511817 WNT2BQ93097 391 aa8.33□□□□□ -1.08
XRCC4-205ENST00000511817 SLC4A5Q9BY07 1137 aa8.32□□□□□ -1.08
XRCC4-205ENST00000511817 TAOK2Q9UL54 1235 aa8.32□□□□□ -1.08
XRCC4-205ENST00000511817 GOLGA8CPA6NN73 597 aa8.31□□□□□ -1.08
XRCC4-205ENST00000511817 KCNK17Q96T54 332 aa8.31□□□□□ -1.08
XRCC4-205ENST00000511817 STK24Q9Y6E0 443 aa8.31□□□□□ -1.08
XRCC4-205ENST00000511817 BHMG1C9JSJ3 638 aaPredicted RBP8.29□□□□□ -1.08
XRCC4-205ENST00000511817 TBC1D12O60347 775 aa8.24□□□□□ -1.09
XRCC4-205ENST00000511817 MRPL50Q8N5N7 158 aaKnown RBP8.24□□□□□ -1.09
XRCC4-205ENST00000511817 STK25O00506 426 aa8.22□□□□□ -1.09
XRCC4-205ENST00000511817 FOXK1P85037 733 aa8.22□□□□□ -1.09
XRCC4-205ENST00000511817 KCNC4Q03721 635 aa8.21□□□□□ -1.09
XRCC4-205ENST00000511817 PLPP6Q8IY26 295 aa8.21□□□□□ -1.1
XRCC4-205ENST00000511817 NYAP1Q6ZVC0 841 aa8.19□□□□□ -1.1
XRCC4-205ENST00000511817 BCL2L12Q9HB09 334 aa8.19□□□□□ -1.1
XRCC4-205ENST00000511817 PPP1R37O75864 691 aa8.18□□□□□ -1.1
XRCC4-205ENST00000511817 NBPF3Q9H094 633 aa8.18□□□□□ -1.1
XRCC4-205ENST00000511817 STK17AQ9UEE5 414 aa8.16□□□□□ -1.1
XRCC4-205ENST00000511817 ZBED2Q9BTP6 218 aa8.15□□□□□ -1.1
XRCC4-205ENST00000511817 GPHNQ9NQX3 736 aaPredicted RBP8.15□□□□□ -1.1
XRCC4-205ENST00000511817 LCE2AQ5TA79 106 aaPredicted RBP8.14□□□□□ -1.11
XRCC4-205ENST00000511817 ZNF454Q8N9F8 522 aa8.14□□□□□ -1.11
XRCC4-205ENST00000511817 TREML4Q6UXN2 200 aa8.14□□□□□ -1.11
XRCC4-205ENST00000511817 PTPREP23469 700 aa8.13□□□□□ -1.11
XRCC4-205ENST00000511817 DSG2Q14126 1118 aa8.13□□□□□ -1.11
XRCC4-205ENST00000511817 ANKK1Q8NFD2 765 aa8.13□□□□□ -1.11
XRCC4-205ENST00000511817 PRKD2Q9BZL6 878 aa8.12□□□□□ -1.11
XRCC4-205ENST00000511817 OXER1Q8TDS5 423 aa8.11□□□□□ -1.11
XRCC4-205ENST00000511817 V9GY48 417 aaPredicted RBP8.11□□□□□ -1.11
XRCC4-205ENST00000511817 FOSBP53539 338 aa8.11□□□□□ -1.11
XRCC4-205ENST00000511817 PDZRN3Q9UPQ7 1066 aa8.07□□□□□ -1.12
XRCC4-205ENST00000511817 SOWAHBA6NEL2 793 aa8.05□□□□□ -1.12
XRCC4-205ENST00000511817 BCAMP50895 628 aa8.05□□□□□ -1.12
XRCC4-205ENST00000511817 UPF1Q92900 1129 aaKnown RBP eCLIP8.04□□□□□ -1.12
XRCC4-205ENST00000511817 ECM2O94769 699 aaPredicted RBP8.03□□□□□ -1.12
XRCC4-205ENST00000511817 JPH4Q96JJ6 628 aa8.03□□□□□ -1.12
XRCC4-205ENST00000511817 ANO8Q9HCE9 1232 aaPredicted RBP8.03□□□□□ -1.12
XRCC4-205ENST00000511817 ZDHHC16Q969W1 377 aa8.03□□□□□ -1.12
XRCC4-205ENST00000511817 ADAM33Q9BZ11 813 aa8.02□□□□□ -1.13
XRCC4-205ENST00000511817 RABGEF1Q9UJ41 708 aa8.02□□□□□ -1.13
XRCC4-205ENST00000511817 WBP1LQ9NX94 342 aa8□□□□□ -1.13
XRCC4-205ENST00000511817 LAPTM4BQ86VI4 370 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms