RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 TOP2AP11388 1531 aaKnown RBP9.61□□□□□ -0.87
CPNE4-208ENST00000511604 HMGXB3Q12766 1538 aa9.6□□□□□ -0.87
CPNE4-208ENST00000511604 TPM2P07951 284 aa9.6□□□□□ -0.87
CPNE4-208ENST00000511604 STAC3Q96MF2 364 aa9.6□□□□□ -0.87
CPNE4-208ENST00000511604 ARID4BQ4LE39 1312 aaPredicted RBP9.6□□□□□ -0.87
CPNE4-208ENST00000511604 CANXP27824 592 aaKnown RBP9.6□□□□□ -0.87
CPNE4-208ENST00000511604 PRKRIP1Q9H875 184 aaPredicted RBP9.6□□□□□ -0.87
CPNE4-208ENST00000511604 RSPH4AQ5TD94 716 aa9.59□□□□□ -0.87
CPNE4-208ENST00000511604 IPO4Q8TEX9 1081 aaKnown RBP9.59□□□□□ -0.87
CPNE4-208ENST00000511604 PHLDB1Q86UU1 1377 aa9.58□□□□□ -0.88
CPNE4-208ENST00000511604 ZNF326Q5BKZ1 582 aaKnown RBP9.58□□□□□ -0.88
CPNE4-208ENST00000511604 EXOC6Q8TAG9 804 aa9.58□□□□□ -0.88
CPNE4-208ENST00000511604 POGKQ9P215 609 aa9.58□□□□□ -0.88
CPNE4-208ENST00000511604 SMG6Q86US8 1419 aaKnown RBP9.58□□□□□ -0.88
CPNE4-208ENST00000511604 TONSLQ96HA7 1378 aa9.57□□□□□ -0.88
CPNE4-208ENST00000511604 LAMC3Q9Y6N6 1575 aa9.57□□□□□ -0.88
CPNE4-208ENST00000511604 SMAP1Q8IYB5 467 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-208ENST00000511604 NUDCQ9Y266 331 aa9.54□□□□□ -0.88
CPNE4-208ENST00000511604 ZHX1Q9UKY1 873 aaPredicted RBP9.54□□□□□ -0.88
CPNE4-208ENST00000511604 XRCC6P12956 609 aaKnown RBP eCLIP9.53□□□□□ -0.88
CPNE4-208ENST00000511604 NCLP19338 710 aaKnown RBP9.53□□□□□ -0.88
CPNE4-208ENST00000511604 NCBP3Q53F19 620 aaKnown RBP9.52□□□□□ -0.88
CPNE4-208ENST00000511604 KDM5BQ9UGL1 1544 aa9.52□□□□□ -0.89
CPNE4-208ENST00000511604 ESPNB1AK53 854 aa9.51□□□□□ -0.89
CPNE4-208ENST00000511604 ARXQ96QS3 562 aa9.51□□□□□ -0.89
CPNE4-208ENST00000511604 MAP7D2Q96T17 732 aa9.51□□□□□ -0.89
CPNE4-208ENST00000511604 NESP48681 1621 aa9.5□□□□□ -0.89
CPNE4-208ENST00000511604 PDS5BQ9NTI5 1447 aa9.5□□□□□ -0.89
CPNE4-208ENST00000511604 CNTLNQ9NXG0 1405 aa9.5□□□□□ -0.89
CPNE4-208ENST00000511604 PANK2Q9BZ23 570 aa9.5□□□□□ -0.89
CPNE4-208ENST00000511604 AQRO60306 1485 aaKnown RBP eCLIP9.5□□□□□ -0.89
CPNE4-208ENST00000511604 ARHGAP35Q9NRY4 1499 aa9.5□□□□□ -0.89
CPNE4-208ENST00000511604 ATAD2BQ9ULI0 1458 aa9.5□□□□□ -0.89
CPNE4-208ENST00000511604 GOLGA6L3A6NEY3 463 aa9.49□□□□□ -0.89
CPNE4-208ENST00000511604 ERBB4Q15303 1308 aa9.48□□□□□ -0.89
CPNE4-208ENST00000511604 FSD2A1L4K1 749 aa9.48□□□□□ -0.89
CPNE4-208ENST00000511604 PLIN1O60240 522 aa9.48□□□□□ -0.89
CPNE4-208ENST00000511604 UTP14CQ5TAP6 766 aaKnown RBP9.48□□□□□ -0.89
CPNE4-208ENST00000511604 KIAA1211Q6ZU35 1233 aa9.48□□□□□ -0.89
CPNE4-208ENST00000511604 FOXD1Q16676 465 aa9.48□□□□□ -0.89
CPNE4-208ENST00000511604 TMEM51Q9NW97 253 aa9.48□□□□□ -0.89
CPNE4-208ENST00000511604 ATP1B4Q9UN42 357 aaPredicted RBP9.47□□□□□ -0.89
CPNE4-208ENST00000511604 FHAD1B1AJZ9 1412 aa9.47□□□□□ -0.89
CPNE4-208ENST00000511604 PRXQ9BXM0 1461 aa9.47□□□□□ -0.89
CPNE4-208ENST00000511604 KIF21AQ7Z4S6 1674 aa9.46□□□□□ -0.89
CPNE4-208ENST00000511604 DMTNQ08495 405 aa9.46□□□□□ -0.89
CPNE4-208ENST00000511604 NCOA2Q15596 1464 aa9.46□□□□□ -0.9
CPNE4-208ENST00000511604 CCDC7Q96M83 1385 aa9.46□□□□□ -0.9
CPNE4-208ENST00000511604 RIPK4P57078 832 aa9.46□□□□□ -0.9
CPNE4-208ENST00000511604 P3H3Q8IVL6 736 aa9.46□□□□□ -0.9
CPNE4-208ENST00000511604 RRP1P56182 461 aaKnown RBP9.45□□□□□ -0.9
CPNE4-208ENST00000511604 EIF4G2P78344 907 aaKnown RBP eCLIP9.45□□□□□ -0.9
CPNE4-208ENST00000511604 ZNF830Q96NB3 372 aaPredicted RBP9.45□□□□□ -0.9
CPNE4-208ENST00000511604 WDR62O43379 1518 aa9.45□□□□□ -0.9
CPNE4-208ENST00000511604 MRC2Q9UBG0 1479 aa9.45□□□□□ -0.9
CPNE4-208ENST00000511604 PPP4R3BQ5MIZ7 849 aa9.45□□□□□ -0.9
CPNE4-208ENST00000511604 FTSJ3Q8IY81 847 aaKnown RBP9.45□□□□□ -0.9
CPNE4-208ENST00000511604 PLCD3Q8N3E9 789 aa9.44□□□□□ -0.9
CPNE4-208ENST00000511604 PRDM10Q9NQV6 1147 aa9.44□□□□□ -0.9
CPNE4-208ENST00000511604 SMARCA4P51532 1647 aa9.44□□□□□ -0.9
CPNE4-208ENST00000511604 PTPRKQ15262 1439 aa9.44□□□□□ -0.9
CPNE4-208ENST00000511604 BRD2P25440 801 aaKnown RBP9.44□□□□□ -0.9
CPNE4-208ENST00000511604 OSCARQ8IYS5 282 aa9.44□□□□□ -0.9
CPNE4-208ENST00000511604 FAM13BQ9NYF5 915 aa9.44□□□□□ -0.9
CPNE4-208ENST00000511604 ZFP91Q96JP5 570 aaPredicted RBP9.43□□□□□ -0.9
CPNE4-208ENST00000511604 POLR3GLQ9BT43 218 aa9.43□□□□□ -0.9
CPNE4-208ENST00000511604 MYH16Q9H6N6 1097 aa9.43□□□□□ -0.9
CPNE4-208ENST00000511604 KIF7Q2M1P5 1343 aa9.43□□□□□ -0.9
CPNE4-208ENST00000511604 NBPF8Q3BBV2 869 aa9.43□□□□□ -0.9
CPNE4-208ENST00000511604 VGLL3A8MV65 326 aa9.42□□□□□ -0.9
CPNE4-208ENST00000511604 MRE11P49959 708 aa9.42□□□□□ -0.9
CPNE4-208ENST00000511604 TERF1P54274 439 aa9.42□□□□□ -0.9
CPNE4-208ENST00000511604 LRRC9Q6ZRR7 1453 aa9.42□□□□□ -0.9
CPNE4-208ENST00000511604 MTERF4Q7Z6M4 381 aaKnown RBP9.41□□□□□ -0.9
CPNE4-208ENST00000511604 ANP32BQ92688 251 aaKnown RBP9.41□□□□□ -0.9
CPNE4-208ENST00000511604 L3MBTL2Q969R5 705 aa9.41□□□□□ -0.9
CPNE4-208ENST00000511604 RIMBP3CA6NJZ7 1639 aa9.41□□□□□ -0.9
CPNE4-208ENST00000511604 RIMBP3BA6NNM3 1639 aa9.41□□□□□ -0.9
CPNE4-208ENST00000511604 RIMBP3Q9UFD9 1639 aa9.41□□□□□ -0.9
CPNE4-208ENST00000511604 ZSCAN20P17040 1043 aaPredicted RBP9.41□□□□□ -0.9
CPNE4-208ENST00000511604 TRIM44Q96DX7 344 aaPredicted RBP9.41□□□□□ -0.9
CPNE4-208ENST00000511604 CDCA7LQ96GN5 454 aa9.41□□□□□ -0.9
CPNE4-208ENST00000511604 NCOA1Q15788 1441 aa9.41□□□□□ -0.9
CPNE4-208ENST00000511604 TNNT2P45379 298 aaPredicted RBP9.4□□□□□ -0.9
CPNE4-208ENST00000511604 DHX37Q8IY37 1157 aaKnown RBP9.4□□□□□ -0.9
CPNE4-208ENST00000511604 PNISRQ8TF01 805 aaKnown RBP9.4□□□□□ -0.9
CPNE4-208ENST00000511604 TIAM1Q13009 1591 aa9.4□□□□□ -0.91
CPNE4-208ENST00000511604 KIF20AO95235 890 aa9.4□□□□□ -0.91
CPNE4-208ENST00000511604 C20orf194Q5TEA3 1177 aa9.4□□□□□ -0.91
CPNE4-208ENST00000511604 TEX2Q8IWB9 1127 aa9.4□□□□□ -0.91
CPNE4-208ENST00000511604 OFD1O75665 1012 aa9.39□□□□□ -0.91
CPNE4-208ENST00000511604 C8orf34Q49A92 452 aa9.39□□□□□ -0.91
CPNE4-208ENST00000511604 CRBNQ96SW2 442 aa9.39□□□□□ -0.91
CPNE4-208ENST00000511604 CHRM1P11229 460 aaPredicted RBP9.38□□□□□ -0.91
CPNE4-208ENST00000511604 FAM161AQ3B820 660 aa9.38□□□□□ -0.91
CPNE4-208ENST00000511604 RCAN3Q9UKA8 241 aa9.38□□□□□ -0.91
CPNE4-208ENST00000511604 CCDC18Q5T9S5 1454 aa9.38□□□□□ -0.91
CPNE4-208ENST00000511604 DHX29Q7Z478 1369 aaKnown RBP9.38□□□□□ -0.91
CPNE4-208ENST00000511604 ARID3AQ99856 593 aa9.38□□□□□ -0.91
CPNE4-208ENST00000511604 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms