RNA–Protein interactions for RNA: ENST00000511566.5

RACK1-225, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3 BASIC

Gene RACK1, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-225ENST00000511566 MAGI2Q86UL8 1455 aa16.31■□□□□ 0.2
RACK1-225ENST00000511566 LMTK3Q96Q04 1460 aa16.31■□□□□ 0.2
RACK1-225ENST00000511566 TROQ12816 1431 aaPredicted RBP16.29■□□□□ 0.2
RACK1-225ENST00000511566 KDM5CP41229 1560 aa16.29■□□□□ 0.2
RACK1-225ENST00000511566 PREX2Q70Z35 1606 aa16.28■□□□□ 0.2
RACK1-225ENST00000511566 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.2
RACK1-225ENST00000511566 CDC42BPBQ9Y5S2 1711 aa16.27■□□□□ 0.19
RACK1-225ENST00000511566 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
RACK1-225ENST00000511566 SCAPERQ9BY12 1400 aa16.26■□□□□ 0.19
RACK1-225ENST00000511566 ARHGAP5Q13017 1502 aa16.24■□□□□ 0.19
RACK1-225ENST00000511566 ARHGEF12Q9NZN5 1544 aa16.24■□□□□ 0.19
RACK1-225ENST00000511566 ABCC1P33527 1531 aa16.24■□□□□ 0.19
RACK1-225ENST00000511566 ITSN2Q9NZM3 1697 aa16.24■□□□□ 0.19
RACK1-225ENST00000511566 CCDC18Q5T9S5 1454 aa16.23■□□□□ 0.19
RACK1-225ENST00000511566 ARID4BQ4LE39 1312 aaPredicted RBP16.23■□□□□ 0.19
RACK1-225ENST00000511566 DIP2CQ9Y2E4 1556 aa16.23■□□□□ 0.19
RACK1-225ENST00000511566 C9orf84Q5VXU9 1444 aa16.23■□□□□ 0.19
RACK1-225ENST00000511566 ABCA6Q8N139 1617 aa16.23■□□□□ 0.19
RACK1-225ENST00000511566 ZNF518AQ6AHZ1 1483 aa16.22■□□□□ 0.19
RACK1-225ENST00000511566 CLIP1P30622 1438 aa16.22■□□□□ 0.19
RACK1-225ENST00000511566 CASKIN1Q8WXD9 1431 aa16.22■□□□□ 0.19
RACK1-225ENST00000511566 CDC42BPAQ5VT25 1732 aa16.22■□□□□ 0.19
RACK1-225ENST00000511566 REREQ9P2R6 1566 aa16.21■□□□□ 0.19
RACK1-225ENST00000511566 ATP10AO60312 1499 aa16.2■□□□□ 0.18
RACK1-225ENST00000511566 FYCO1Q9BQS8 1478 aa16.2■□□□□ 0.18
RACK1-225ENST00000511566 PREX1Q8TCU6 1659 aa16.17■□□□□ 0.18
RACK1-225ENST00000511566 EFCAB2Q5VUJ9 269 aa16.16■□□□□ 0.18
RACK1-225ENST00000511566 ATP1B4Q9UN42 357 aaPredicted RBP16.16■□□□□ 0.18
RACK1-225ENST00000511566 CDK11AQ9UQ88 783 aaPredicted RBP16.16■□□□□ 0.18
RACK1-225ENST00000511566 KIDINS220Q9ULH0 1771 aa16.14■□□□□ 0.17
RACK1-225ENST00000511566 MLH3Q9UHC1 1453 aa16.14■□□□□ 0.17
RACK1-225ENST00000511566 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
RACK1-225ENST00000511566 TRAPPC8Q9Y2L5 1435 aa16.11■□□□□ 0.17
RACK1-225ENST00000511566 AGLP35573 1532 aa16.11■□□□□ 0.17
RACK1-225ENST00000511566 C3P01024 1663 aa16.1■□□□□ 0.17
RACK1-225ENST00000511566 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
RACK1-225ENST00000511566 MLECQ14165 292 aa16.09■□□□□ 0.17
RACK1-225ENST00000511566 AFAP1Q8N556 730 aa16.07■□□□□ 0.16
RACK1-225ENST00000511566 INO80Q9ULG1 1556 aaPredicted RBP16.07■□□□□ 0.16
RACK1-225ENST00000511566 HSPA2P54652 639 aa16.06■□□□□ 0.16
RACK1-225ENST00000511566 GPATCH8Q9UKJ3 1502 aaKnown RBP16.05■□□□□ 0.16
RACK1-225ENST00000511566 STRCQ7RTU9 1775 aa16.05■□□□□ 0.16
RACK1-225ENST00000511566 PLXNC1O60486 1568 aa16.04■□□□□ 0.16
RACK1-225ENST00000511566 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
RACK1-225ENST00000511566 MROH2AA6NES4 1674 aa16.03■□□□□ 0.16
RACK1-225ENST00000511566 FBXO41Q8TF61 875 aa16.03■□□□□ 0.16
RACK1-225ENST00000511566 SETD1BQ9UPS6 1966 aaKnown RBP16.03■□□□□ 0.16
RACK1-225ENST00000511566 TIAM1Q13009 1591 aa16.03■□□□□ 0.16
RACK1-225ENST00000511566 ATP7AQ04656 1500 aa16.02■□□□□ 0.15
RACK1-225ENST00000511566 EHBP1L1Q8N3D4 1523 aa16.01■□□□□ 0.15
RACK1-225ENST00000511566 UHRF1BP1Q6BDS2 1440 aa15.99■□□□□ 0.15
RACK1-225ENST00000511566 SUPT6HQ7KZ85 1726 aaKnown RBP15.99■□□□□ 0.15
RACK1-225ENST00000511566 PLEKHH2Q8IVE3 1493 aa15.97■□□□□ 0.15
RACK1-225ENST00000511566 KIAA1107Q9UPP5 1409 aa15.97■□□□□ 0.15
RACK1-225ENST00000511566 CEBPAP49715 358 aaPredicted RBP15.97■□□□□ 0.15
RACK1-225ENST00000511566 ADGBQ8N7X0 1667 aa15.96■□□□□ 0.15
RACK1-225ENST00000511566 CNTLNQ9NXG0 1405 aa15.96■□□□□ 0.15
RACK1-225ENST00000511566 ZNF142P52746 1687 aaPredicted RBP15.95■□□□□ 0.14
RACK1-225ENST00000511566 CLTCQ00610 1675 aaKnown RBP15.95■□□□□ 0.14
RACK1-225ENST00000511566 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
RACK1-225ENST00000511566 MYT1LQ9UL68 1186 aa15.94■□□□□ 0.14
RACK1-225ENST00000511566 MYO3AQ8NEV4 1616 aa15.94■□□□□ 0.14
RACK1-225ENST00000511566 MTUS2Q5JR59 1369 aa15.92■□□□□ 0.14
RACK1-225ENST00000511566 CCNB3Q8WWL7 1395 aa15.92■□□□□ 0.14
RACK1-225ENST00000511566 A2MP01023 1474 aa15.91■□□□□ 0.14
RACK1-225ENST00000511566 NPATQ14207 1427 aa15.91■□□□□ 0.14
RACK1-225ENST00000511566 MBD5Q9P267 1494 aa15.91■□□□□ 0.14
RACK1-225ENST00000511566 SPAG9O60271 1321 aaKnown RBP15.9■□□□□ 0.14
RACK1-225ENST00000511566 NCOA1Q15788 1441 aa15.89■□□□□ 0.13
RACK1-225ENST00000511566 ZNF777Q9ULD5 760 aaPredicted RBP15.89■□□□□ 0.13
RACK1-225ENST00000511566 PTPRTO14522 1441 aa15.87■□□□□ 0.13
RACK1-225ENST00000511566 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.132e-9■■■□□ 17.5
RACK1-225ENST00000511566 CFDP1Q9UEE9 299 aaPredicted RBP15.87■□□□□ 0.13
RACK1-225ENST00000511566 NCOA2Q15596 1464 aa15.86■□□□□ 0.13
RACK1-225ENST00000511566 CERKQ8TCT0 537 aa15.86■□□□□ 0.13
RACK1-225ENST00000511566 CEP170BQ9Y4F5 1589 aaPredicted RBP15.86■□□□□ 0.13
RACK1-225ENST00000511566 CAMSAP1Q5T5Y3 1602 aa15.86■□□□□ 0.13
RACK1-225ENST00000511566 LTBP4Q8N2S1 1624 aa15.86■□□□□ 0.13
RACK1-225ENST00000511566 CAMSAP2Q08AD1 1489 aa15.85■□□□□ 0.13
RACK1-225ENST00000511566 CCDC141Q6ZP82 1450 aa15.84■□□□□ 0.13
RACK1-225ENST00000511566 ZNF644Q9H582 1327 aaPredicted RBP15.83■□□□□ 0.12
RACK1-225ENST00000511566 PTPRKQ15262 1439 aa15.83■□□□□ 0.12
RACK1-225ENST00000511566 ARHGEF5Q12774 1597 aa15.83■□□□□ 0.12
RACK1-225ENST00000511566 ESF1Q9H501 851 aaKnown RBP15.82■□□□□ 0.12
RACK1-225ENST00000511566 ZMYM3Q14202 1370 aa15.82■□□□□ 0.12
RACK1-225ENST00000511566 RTEL1-TNFRSF6BF6WH68 1400 aa15.82■□□□□ 0.12
RACK1-225ENST00000511566 FAM135AQ9P2D6 1515 aa15.82■□□□□ 0.12
RACK1-225ENST00000511566 PLA2R1Q13018 1463 aa15.8■□□□□ 0.12
RACK1-225ENST00000511566 KDM5DQ9BY66 1539 aa15.78■□□□□ 0.12
RACK1-225ENST00000511566 TCOF1Q13428 1488 aaKnown RBP15.78■□□□□ 0.12
RACK1-225ENST00000511566 VPS8Q8N3P4 1428 aa15.78■□□□□ 0.12
RACK1-225ENST00000511566 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
RACK1-225ENST00000511566 IQSEC2Q5JU85 1478 aa15.78■□□□□ 0.12
RACK1-225ENST00000511566 POLR1AO95602 1720 aaPredicted RBP15.77■□□□□ 0.11
RACK1-225ENST00000511566 RNF17Q9BXT8 1623 aaKnown RBP15.76■□□□□ 0.11
RACK1-225ENST00000511566 MAST1Q9Y2H9 1570 aa15.76■□□□□ 0.11
RACK1-225ENST00000511566 LRRC9Q6ZRR7 1453 aa15.76■□□□□ 0.11
RACK1-225ENST00000511566 DNMT1P26358 1616 aaKnown RBP15.76■□□□□ 0.11
RACK1-225ENST00000511566 DHX29Q7Z478 1369 aaKnown RBP15.75■□□□□ 0.11
RACK1-225ENST00000511566 A2ML1A8K2U0 1454 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms