RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 EFCAB2Q5VUJ9 269 aa19.19■□□□□ 0.66
HMGB2-205ENST00000511316 MTUS2Q5JR59 1369 aa19.19■□□□□ 0.66
HMGB2-205ENST00000511316 GPATCH8Q9UKJ3 1502 aaKnown RBP19.18■□□□□ 0.66
HMGB2-205ENST00000511316 CDC42BPBQ9Y5S2 1711 aa19.17■□□□□ 0.66
HMGB2-205ENST00000511316 TIAM1Q13009 1591 aa19.17■□□□□ 0.66
HMGB2-205ENST00000511316 FRMPD1Q5SYB0 1578 aa19.16■□□□□ 0.66
HMGB2-205ENST00000511316 MAP3K1Q13233 1512 aa19.16■□□□□ 0.66
HMGB2-205ENST00000511316 ACIN1Q9UKV3 1341 aaKnown RBP19.15■□□□□ 0.66
HMGB2-205ENST00000511316 MYO5CQ9NQX4 1742 aa19.15■□□□□ 0.66
HMGB2-205ENST00000511316 SCAPERQ9BY12 1400 aa19.14■□□□□ 0.65
HMGB2-205ENST00000511316 DENND4BO75064 1496 aaPredicted RBP19.13■□□□□ 0.65
HMGB2-205ENST00000511316 LRRC9Q6ZRR7 1453 aa19.13■□□□□ 0.65
HMGB2-205ENST00000511316 CDC42BPAQ5VT25 1732 aa19.13■□□□□ 0.65
HMGB2-205ENST00000511316 ARHGEF12Q9NZN5 1544 aa19.12■□□□□ 0.65
HMGB2-205ENST00000511316 ADGRL1O94910 1474 aa19.12■□□□□ 0.65
HMGB2-205ENST00000511316 EHBP1L1Q8N3D4 1523 aa19.12■□□□□ 0.65
HMGB2-205ENST00000511316 ARHGAP5Q13017 1502 aa19.11■□□□□ 0.65
HMGB2-205ENST00000511316 PREX2Q70Z35 1606 aa19.11■□□□□ 0.65
HMGB2-205ENST00000511316 RICTORQ6R327 1708 aa19.11■□□□□ 0.65
HMGB2-205ENST00000511316 KDM4FA0A1W2PPD8 638 aa19.1■□□□□ 0.65
HMGB2-205ENST00000511316 DIEXFQ68CQ4 756 aaKnown RBP19.1■□□□□ 0.65
HMGB2-205ENST00000511316 AFAP1Q8N556 730 aa19.1■□□□□ 0.65
HMGB2-205ENST00000511316 CFAP74Q9C0B2 1584 aa19.09■□□□□ 0.65
HMGB2-205ENST00000511316 CCNB3Q8WWL7 1395 aa19.08■□□□□ 0.65
HMGB2-205ENST00000511316 POGZQ7Z3K3 1410 aa19.08■□□□□ 0.65
HMGB2-205ENST00000511316 MYT1Q01538 1121 aa19.08■□□□□ 0.64
HMGB2-205ENST00000511316 NCOA2Q15596 1464 aa19.08■□□□□ 0.64
HMGB2-205ENST00000511316 ZNF644Q9H582 1327 aaPredicted RBP19.07■□□□□ 0.64
HMGB2-205ENST00000511316 CFDP1Q9UEE9 299 aaPredicted RBP19.07■□□□□ 0.64
HMGB2-205ENST00000511316 TRAPPC8Q9Y2L5 1435 aa19.06■□□□□ 0.64
HMGB2-205ENST00000511316 SAMD9LQ8IVG5 1584 aa19.04■□□□□ 0.64
HMGB2-205ENST00000511316 ZMYM4Q5VZL5 1548 aa19.04■□□□□ 0.64
HMGB2-205ENST00000511316 YEATS2Q9ULM3 1422 aa19.03■□□□□ 0.64
HMGB2-205ENST00000511316 ZNF777Q9ULD5 760 aaPredicted RBP19.03■□□□□ 0.64
HMGB2-205ENST00000511316 ABCC1P33527 1531 aa19.03■□□□□ 0.64
HMGB2-205ENST00000511316 HNRNPMP52272 730 aaKnown RBP eCLIP19.02■□□□□ 0.64
HMGB2-205ENST00000511316 KIAA1107Q9UPP5 1409 aa19.02■□□□□ 0.63
HMGB2-205ENST00000511316 MAGI2Q86UL8 1455 aa19■□□□□ 0.63
HMGB2-205ENST00000511316 KDM5CP41229 1560 aa19■□□□□ 0.63
HMGB2-205ENST00000511316 SUPT6HQ7KZ85 1726 aaKnown RBP19■□□□□ 0.63
HMGB2-205ENST00000511316 ZNF518AQ6AHZ1 1483 aa19■□□□□ 0.63
HMGB2-205ENST00000511316 MBD5Q9P267 1494 aa19■□□□□ 0.63
HMGB2-205ENST00000511316 ZNF316A6NFI3 1004 aaPredicted RBP18.97■□□□□ 0.63
HMGB2-205ENST00000511316 APLP2Q06481 763 aa18.97■□□□□ 0.63
HMGB2-205ENST00000511316 MLH3Q9UHC1 1453 aa18.96■□□□□ 0.63
HMGB2-205ENST00000511316 SYCP2Q9BX26 1530 aa18.95■□□□□ 0.62
HMGB2-205ENST00000511316 ITSN2Q9NZM3 1697 aa18.95■□□□□ 0.62
HMGB2-205ENST00000511316 SIGLEC1Q9BZZ2 1709 aa18.95■□□□□ 0.62
HMGB2-205ENST00000511316 ARHGEF40Q8TER5 1519 aa18.94■□□□□ 0.62
HMGB2-205ENST00000511316 ZFYVE16Q7Z3T8 1539 aa18.93■□□□□ 0.62
HMGB2-205ENST00000511316 PLEKHH2Q8IVE3 1493 aa18.93■□□□□ 0.62
HMGB2-205ENST00000511316 MYOM3Q5VTT5 1437 aa18.92■□□□□ 0.62
HMGB2-205ENST00000511316 ATP10AO60312 1499 aa18.91■□□□□ 0.62
HMGB2-205ENST00000511316 CLSPNQ9HAW4 1339 aa18.9■□□□□ 0.62
HMGB2-205ENST00000511316 MIA2Q96PC5 1412 aa18.9■□□□□ 0.62
HMGB2-205ENST00000511316 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
HMGB2-205ENST00000511316 KIDINS220Q9ULH0 1771 aa18.89■□□□□ 0.62
HMGB2-205ENST00000511316 CAMSAP2Q08AD1 1489 aa18.89■□□□□ 0.61
HMGB2-205ENST00000511316 HECW2Q9P2P5 1572 aa18.88■□□□□ 0.61
HMGB2-205ENST00000511316 SPAG9O60271 1321 aaKnown RBP18.87■□□□□ 0.61
HMGB2-205ENST00000511316 DIP2CQ9Y2E4 1556 aa18.87■□□□□ 0.61
HMGB2-205ENST00000511316 RSPH4AQ5TD94 716 aa18.86■□□□□ 0.61
HMGB2-205ENST00000511316 ABCA6Q8N139 1617 aa18.85■□□□□ 0.61
HMGB2-205ENST00000511316 C9orf84Q5VXU9 1444 aa18.85■□□□□ 0.61
HMGB2-205ENST00000511316 ADAMTSL3P82987 1691 aa18.83■□□□□ 0.61
HMGB2-205ENST00000511316 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.6
HMGB2-205ENST00000511316 RTEL1-TNFRSF6BF6WH68 1400 aa18.83■□□□□ 0.6
HMGB2-205ENST00000511316 REREQ9P2R6 1566 aa18.82■□□□□ 0.6
HMGB2-205ENST00000511316 INO80Q9ULG1 1556 aaPredicted RBP18.82■□□□□ 0.6
HMGB2-205ENST00000511316 FGD6Q6ZV73 1430 aa18.82■□□□□ 0.6
HMGB2-205ENST00000511316 BCORL1Q5H9F3 1711 aa18.82■□□□□ 0.6
HMGB2-205ENST00000511316 ATP7AQ04656 1500 aa18.81■□□□□ 0.6
HMGB2-205ENST00000511316 AEBP2Q6ZN18 517 aaPredicted RBP18.81■□□□□ 0.6
HMGB2-205ENST00000511316 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
HMGB2-205ENST00000511316 CCDC141Q6ZP82 1450 aa18.81■□□□□ 0.6
HMGB2-205ENST00000511316 ARHGEF5Q12774 1597 aa18.8■□□□□ 0.6
HMGB2-205ENST00000511316 TCOF1Q13428 1488 aaKnown RBP18.8■□□□□ 0.6
HMGB2-205ENST00000511316 GTF3C3Q9Y5Q9 886 aa18.79■□□□□ 0.6
HMGB2-205ENST00000511316 AGLP35573 1532 aa18.78■□□□□ 0.6
HMGB2-205ENST00000511316 ABCC5O15440 1437 aa18.77■□□□□ 0.6
HMGB2-205ENST00000511316 PTPN23Q9H3S7 1636 aa18.77■□□□□ 0.6
HMGB2-205ENST00000511316 MLECQ14165 292 aa18.77■□□□□ 0.59
HMGB2-205ENST00000511316 TSPY4P0CV99 314 aa18.75■□□□□ 0.59
HMGB2-205ENST00000511316 TSPY10P0CW01 314 aa18.75■□□□□ 0.59
HMGB2-205ENST00000511316 PLXNC1O60486 1568 aa18.75■□□□□ 0.59
HMGB2-205ENST00000511316 DHX29Q7Z478 1369 aaKnown RBP18.74■□□□□ 0.59
HMGB2-205ENST00000511316 A2MP01023 1474 aa18.74■□□□□ 0.59
HMGB2-205ENST00000511316 PTPRMP28827 1452 aa18.74■□□□□ 0.59
HMGB2-205ENST00000511316 MADDQ8WXG6 1647 aa18.73■□□□□ 0.59
HMGB2-205ENST00000511316 MAST1Q9Y2H9 1570 aa18.71■□□□□ 0.59
HMGB2-205ENST00000511316 DAPK1P53355 1430 aa18.7■□□□□ 0.58
HMGB2-205ENST00000511316 PTPRKQ15262 1439 aa18.68■□□□□ 0.58
HMGB2-205ENST00000511316 ADGBQ8N7X0 1667 aa18.67■□□□□ 0.58
HMGB2-205ENST00000511316 DNMT1P26358 1616 aaKnown RBP18.67■□□□□ 0.58
HMGB2-205ENST00000511316 SHANK2Q9UPX8 1470 aa18.66■□□□□ 0.58
HMGB2-205ENST00000511316 FAM50AQ14320 339 aaKnown RBP18.66■□□□□ 0.58
HMGB2-205ENST00000511316 CEBPAP49715 358 aaPredicted RBP18.65■□□□□ 0.58
HMGB2-205ENST00000511316 NCOA1Q15788 1441 aa18.64■□□□□ 0.57
HMGB2-205ENST00000511316 CHIC2Q9UKJ5 165 aa18.64■□□□□ 0.57
HMGB2-205ENST00000511316 RIMS1Q86UR5 1692 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms