RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 TTC37Q6PGP7 1564 aa17.23■□□□□ 0.35
DDX41-211ENST00000510171 FMN1Q68DA7 1419 aa17.22■□□□□ 0.35
DDX41-211ENST00000510171 ZMYM4Q5VZL5 1548 aa17.22■□□□□ 0.35
DDX41-211ENST00000510171 RICTORQ6R327 1708 aa17.22■□□□□ 0.35
DDX41-211ENST00000510171 RIMS1Q86UR5 1692 aaKnown RBP17.19■□□□□ 0.34
DDX41-211ENST00000510171 HECW1Q76N89 1606 aa17.18■□□□□ 0.34
DDX41-211ENST00000510171 ATP10AO60312 1499 aa17.18■□□□□ 0.34
DDX41-211ENST00000510171 AFAP1Q8N556 730 aa17.17■□□□□ 0.34
DDX41-211ENST00000510171 MYT1LQ9UL68 1186 aa17.17■□□□□ 0.34
DDX41-211ENST00000510171 ARHGAP35Q9NRY4 1499 aa17.15■□□□□ 0.34
DDX41-211ENST00000510171 C9orf84Q5VXU9 1444 aa17.14■□□□□ 0.33
DDX41-211ENST00000510171 CEBPAP49715 358 aaPredicted RBP17.14■□□□□ 0.33
DDX41-211ENST00000510171 CERKQ8TCT0 537 aa17.14■□□□□ 0.33
DDX41-211ENST00000510171 TROQ12816 1431 aaPredicted RBP17.13■□□□□ 0.33
DDX41-211ENST00000510171 CLIP1P30622 1438 aa17.13■□□□□ 0.33
DDX41-211ENST00000510171 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
DDX41-211ENST00000510171 SIGLEC1Q9BZZ2 1709 aa17.1■□□□□ 0.33
DDX41-211ENST00000510171 ZNF518AQ6AHZ1 1483 aa17.1■□□□□ 0.33
DDX41-211ENST00000510171 ARHGEF12Q9NZN5 1544 aa17.1■□□□□ 0.33
DDX41-211ENST00000510171 ARHGAP5Q13017 1502 aa17.08■□□□□ 0.32
DDX41-211ENST00000510171 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
DDX41-211ENST00000510171 ESF1Q9H501 851 aaKnown RBP17.06■□□□□ 0.32
DDX41-211ENST00000510171 KIF14Q15058 1648 aa17.06■□□□□ 0.32
DDX41-211ENST00000510171 MYO5CQ9NQX4 1742 aa17.03■□□□□ 0.32
DDX41-211ENST00000510171 FER1L4A9Z1Z3 1794 aa17.02■□□□□ 0.32
DDX41-211ENST00000510171 MLH3Q9UHC1 1453 aa17.02■□□□□ 0.32
DDX41-211ENST00000510171 UHRF1BP1Q6BDS2 1440 aa17.02■□□□□ 0.31
DDX41-211ENST00000510171 KDM5CP41229 1560 aa17.02■□□□□ 0.31
DDX41-211ENST00000510171 TRAPPC8Q9Y2L5 1435 aa17.01■□□□□ 0.31
DDX41-211ENST00000510171 CASKIN1Q8WXD9 1431 aa17■□□□□ 0.31
DDX41-211ENST00000510171 ZNF777Q9ULD5 760 aaPredicted RBP16.98■□□□□ 0.31
DDX41-211ENST00000510171 CCDC18Q5T9S5 1454 aa16.98■□□□□ 0.31
DDX41-211ENST00000510171 DIP2CQ9Y2E4 1556 aa16.96■□□□□ 0.31
DDX41-211ENST00000510171 REREQ9P2R6 1566 aa16.95■□□□□ 0.3
DDX41-211ENST00000510171 AGLP35573 1532 aa16.95■□□□□ 0.3
DDX41-211ENST00000510171 PREX1Q8TCU6 1659 aa16.94■□□□□ 0.3
DDX41-211ENST00000510171 ABCC1P33527 1531 aa16.93■□□□□ 0.3
DDX41-211ENST00000510171 HNRNPMP52272 730 aaKnown RBP eCLIP16.93■□□□□ 0.3
DDX41-211ENST00000510171 SPAG9O60271 1321 aaKnown RBP16.93■□□□□ 0.3
DDX41-211ENST00000510171 PTPRTO14522 1441 aa16.92■□□□□ 0.3
DDX41-211ENST00000510171 CNTLNQ9NXG0 1405 aa16.92■□□□□ 0.3
DDX41-211ENST00000510171 CFDP1Q9UEE9 299 aaPredicted RBP16.91■□□□□ 0.3
DDX41-211ENST00000510171 ABCA6Q8N139 1617 aa16.9■□□□□ 0.3
DDX41-211ENST00000510171 CDC42BPBQ9Y5S2 1711 aa16.9■□□□□ 0.3
DDX41-211ENST00000510171 ZMYM3Q14202 1370 aa16.89■□□□□ 0.29
DDX41-211ENST00000510171 PREX2Q70Z35 1606 aa16.88■□□□□ 0.29
DDX41-211ENST00000510171 FYCO1Q9BQS8 1478 aa16.88■□□□□ 0.29
DDX41-211ENST00000510171 LRRIQ1Q96JM4 1722 aa16.88■□□□□ 0.29
DDX41-211ENST00000510171 GPATCH8Q9UKJ3 1502 aaKnown RBP16.88■□□□□ 0.29
DDX41-211ENST00000510171 SETD1BQ9UPS6 1966 aaKnown RBP16.87■□□□□ 0.29
DDX41-211ENST00000510171 STRCQ7RTU9 1775 aa16.87■□□□□ 0.29
DDX41-211ENST00000510171 CCNB3Q8WWL7 1395 aa16.85■□□□□ 0.29
DDX41-211ENST00000510171 NPATQ14207 1427 aa16.85■□□□□ 0.29
DDX41-211ENST00000510171 KIAA1107Q9UPP5 1409 aa16.85■□□□□ 0.29
DDX41-211ENST00000510171 GGT6Q6P531 493 aa16.84■□□□□ 0.29
DDX41-211ENST00000510171 DISP3Q9P2K9 1392 aa16.84■□□□□ 0.29
DDX41-211ENST00000510171 NCOA1Q15788 1441 aa16.84■□□□□ 0.29
DDX41-211ENST00000510171 SAMD9LQ8IVG5 1584 aa16.84■□□□□ 0.29
DDX41-211ENST00000510171 C3P01024 1663 aa16.84■□□□□ 0.29
DDX41-211ENST00000510171 ITSN2Q9NZM3 1697 aa16.83■□□□□ 0.28
DDX41-211ENST00000510171 KIDINS220Q9ULH0 1771 aa16.83■□□□□ 0.28
DDX41-211ENST00000510171 PLEKHH2Q8IVE3 1493 aa16.82■□□□□ 0.28
DDX41-211ENST00000510171 NCKAP5LQ9HCH0 1330 aa16.82■□□□□ 0.28
DDX41-211ENST00000510171 SYCP2Q9BX26 1530 aa16.81■□□□□ 0.28
DDX41-211ENST00000510171 MTUS2Q5JR59 1369 aa16.81■□□□□ 0.28
DDX41-211ENST00000510171 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
DDX41-211ENST00000510171 A2MP01023 1474 aa16.8■□□□□ 0.28
DDX41-211ENST00000510171 PKD2Q13563 968 aa16.79■□□□□ 0.28
DDX41-211ENST00000510171 ILDR2Q71H61 639 aa16.79■□□□□ 0.28
DDX41-211ENST00000510171 CDC42BPAQ5VT25 1732 aa16.79■□□□□ 0.28
DDX41-211ENST00000510171 ZNF644Q9H582 1327 aaPredicted RBP16.78■□□□□ 0.28
DDX41-211ENST00000510171 LTBP4Q8N2S1 1624 aa16.77■□□□□ 0.27
DDX41-211ENST00000510171 ATP7AQ04656 1500 aa16.76■□□□□ 0.27
DDX41-211ENST00000510171 CAMSAP1Q5T5Y3 1602 aa16.76■□□□□ 0.27
DDX41-211ENST00000510171 ZNF335Q9H4Z2 1342 aaPredicted RBP16.75■□□□□ 0.27
DDX41-211ENST00000510171 IQSEC2Q5JU85 1478 aa16.75■□□□□ 0.27
DDX41-211ENST00000510171 PTPRKQ15262 1439 aa16.75■□□□□ 0.27
DDX41-211ENST00000510171 SOCS7O14512 581 aa16.74■□□□□ 0.27
DDX41-211ENST00000510171 UBAP1LF5GYI3 381 aa16.72■□□□□ 0.27
DDX41-211ENST00000510171 MROH2AA6NES4 1674 aa16.72■□□□□ 0.27
DDX41-211ENST00000510171 DHX29Q7Z478 1369 aaKnown RBP16.71■□□□□ 0.27
DDX41-211ENST00000510171 PLXNC1O60486 1568 aa16.71■□□□□ 0.27
DDX41-211ENST00000510171 RTEL1-TNFRSF6BF6WH68 1400 aa16.7■□□□□ 0.26
DDX41-211ENST00000510171 SUPT6HQ7KZ85 1726 aaKnown RBP16.7■□□□□ 0.26
DDX41-211ENST00000510171 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
DDX41-211ENST00000510171 MBD5Q9P267 1494 aa16.7■□□□□ 0.26
DDX41-211ENST00000510171 KIF3BO15066 747 aa16.7■□□□□ 0.26
DDX41-211ENST00000510171 RSPH4AQ5TD94 716 aa16.7■□□□□ 0.26
DDX41-211ENST00000510171 INO80Q9ULG1 1556 aaPredicted RBP16.69■□□□□ 0.26
DDX41-211ENST00000510171 FBXO31Q5XUX0 539 aaPredicted RBP16.67■□□□□ 0.26
DDX41-211ENST00000510171 CEP162Q5TB80 1403 aa16.67■□□□□ 0.26
DDX41-211ENST00000510171 TCOF1Q13428 1488 aaKnown RBP16.67■□□□□ 0.26
DDX41-211ENST00000510171 CLTCQ00610 1675 aaKnown RBP16.66■□□□□ 0.26
DDX41-211ENST00000510171 WASHC2CQ9Y4E1 1318 aa16.65■□□□□ 0.26
DDX41-211ENST00000510171 CEP170BQ9Y4F5 1589 aaPredicted RBP16.64■□□□□ 0.25
DDX41-211ENST00000510171 A2ML1A8K2U0 1454 aa16.64■□□□□ 0.25
DDX41-211ENST00000510171 EHBP1L1Q8N3D4 1523 aa16.64■□□□□ 0.25
DDX41-211ENST00000510171 TIAM1Q13009 1591 aa16.64■□□□□ 0.25
DDX41-211ENST00000510171 TNRQ92752 1358 aa16.64■□□□□ 0.25
DDX41-211ENST00000510171 TSPY4P0CV99 314 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms