RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 TMEM92Q6UXU6 159 aa10.1□□□□□ -0.79
CAST-229ENST00000510098 BBXQ8WY36 941 aaPredicted RBP10.1□□□□□ -0.79
CAST-229ENST00000510098 RYDENQ9NUL5 291 aaKnown RBP10.08□□□□□ -0.8
CAST-229ENST00000510098 CDAN1Q8IWY9 1227 aa10.05□□□□□ -0.8
CAST-229ENST00000510098 MARVELD3Q96A59 401 aa10.03□□□□□ -0.8
CAST-229ENST00000510098 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.03□□□□□ -0.8
CAST-229ENST00000510098 DOK7Q18PE1 504 aa10.02□□□□□ -0.81
CAST-229ENST00000510098 KIF3CO14782 793 aa10.01□□□□□ -0.81
CAST-229ENST00000510098 PLSCR2Q9NRY7 297 aa10.01□□□□□ -0.81
CAST-229ENST00000510098 HOXB1P14653 301 aaPredicted RBP10□□□□□ -0.81
CAST-229ENST00000510098 SPRYD3Q8NCJ5 442 aa9.99□□□□□ -0.81
CAST-229ENST00000510098 POTEB3A0JP26 581 aa9.98□□□□□ -0.81
CAST-229ENST00000510098 POTEBQ6S5H4 581 aa9.98□□□□□ -0.81
CAST-229ENST00000510098 ZSWIM6Q9HCJ5 1215 aa9.98□□□□□ -0.81
CAST-229ENST00000510098 EMP3P54852 163 aa9.97□□□□□ -0.81
CAST-229ENST00000510098 PAXIP1Q6ZW49 1069 aaPredicted RBP9.97□□□□□ -0.81
CAST-229ENST00000510098 C2orf72A6NCS6 295 aa9.96□□□□□ -0.82
CAST-229ENST00000510098 CFAP44Q96MT7 982 aa9.96□□□□□ -0.82
CAST-229ENST00000510098 ZNF710Q8N1W2 664 aa9.94□□□□□ -0.82
CAST-229ENST00000510098 RIMBP2O15034 1052 aa9.93□□□□□ -0.82
CAST-229ENST00000510098 GPR153Q6NV75 609 aa9.93□□□□□ -0.82
CAST-229ENST00000510098 TMC2Q8TDI7 906 aa9.93□□□□□ -0.82
CAST-229ENST00000510098 HS3ST6Q96QI5 342 aa9.93□□□□□ -0.82
CAST-229ENST00000510098 FAM205CA6NFA0 338 aa9.9□□□□□ -0.82
CAST-229ENST00000510098 GPHNQ9NQX3 736 aaPredicted RBP9.9□□□□□ -0.82
CAST-229ENST00000510098 CADPS2Q86UW7 1296 aa9.89□□□□□ -0.83
CAST-229ENST00000510098 NCKAP5LQ9HCH0 1330 aa9.88□□□□□ -0.83
CAST-229ENST00000510098 SLC34A2O95436 690 aa9.87□□□□□ -0.83
CAST-229ENST00000510098 KRTAP3-3Q9BYR6 98 aa9.87□□□□□ -0.83
CAST-229ENST00000510098 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
CAST-229ENST00000510098 CRISPLD2Q9H0B8 497 aa9.87□□□□□ -0.83
CAST-229ENST00000510098 DSG2Q14126 1118 aa9.85□□□□□ -0.83
CAST-229ENST00000510098 PDE4AP27815 886 aa9.84□□□□□ -0.83
CAST-229ENST00000510098 FOXK1P85037 733 aa9.84□□□□□ -0.83
CAST-229ENST00000510098 SPNS2Q8IVW8 549 aa9.83□□□□□ -0.84
CAST-229ENST00000510098 PLPP6Q8IY26 295 aa9.83□□□□□ -0.84
CAST-229ENST00000510098 LARP6Q9BRS8 491 aaKnown RBP9.83□□□□□ -0.84
CAST-229ENST00000510098 ARSIQ5FYB1 569 aa9.82□□□□□ -0.84
CAST-229ENST00000510098 ERBB3P21860 1342 aa9.82□□□□□ -0.84
CAST-229ENST00000510098 VARS2Q5ST30 1063 aaKnown RBP9.79□□□□□ -0.84
CAST-229ENST00000510098 PPP1R15BQ5SWA1 713 aa9.79□□□□□ -0.84
CAST-229ENST00000510098 ZNF687Q8N1G0 1237 aa9.79□□□□□ -0.84
CAST-229ENST00000510098 TSHZ2Q9NRE2 1034 aa9.79□□□□□ -0.84
CAST-229ENST00000510098 PLCB2Q00722 1185 aa9.78□□□□□ -0.84
CAST-229ENST00000510098 MMRN1Q13201 1228 aa9.78□□□□□ -0.84
CAST-229ENST00000510098 MFSD10Q14728 455 aa9.78□□□□□ -0.84
CAST-229ENST00000510098 KHSRPQ92945 711 aaKnown RBP eCLIP9.78□□□□□ -0.84
CAST-229ENST00000510098 DDX27Q96GQ7 796 aaKnown RBP9.78□□□□□ -0.84
CAST-229ENST00000510098 ZNF316A6NFI3 1004 aaPredicted RBP9.77□□□□□ -0.85
CAST-229ENST00000510098 PCDHGA4Q9Y5G9 962 aa9.77□□□□□ -0.85
CAST-229ENST00000510098 KDM4FA0A1W2PPD8 638 aa9.76□□□□□ -0.85
CAST-229ENST00000510098 PTCD2Q8WV60 388 aaKnown RBP9.76□□□□□ -0.85
CAST-229ENST00000510098 SLC24A1O60721 1099 aa9.75□□□□□ -0.85
CAST-229ENST00000510098 NUDT7P0C024 238 aa9.72□□□□□ -0.85
CAST-229ENST00000510098 UPF1Q92900 1129 aaKnown RBP eCLIP9.7□□□□□ -0.865e-6■□□□□ 10.5
CAST-229ENST00000510098 OXER1Q8TDS5 423 aa9.69□□□□□ -0.86
CAST-229ENST00000510098 LHX6Q9UPM6 363 aa9.68□□□□□ -0.86
CAST-229ENST00000510098 EMILIN3Q9NT22 766 aa9.67□□□□□ -0.86
CAST-229ENST00000510098 TBC1D12O60347 775 aa9.66□□□□□ -0.86
CAST-229ENST00000510098 CAMK2BQ13554 666 aa9.65□□□□□ -0.86
CAST-229ENST00000510098 WDR70Q9NW82 654 aa9.65□□□□□ -0.86
CAST-229ENST00000510098 HAP1P54257 671 aaPredicted RBP9.64□□□□□ -0.87
CAST-229ENST00000510098 POTEEQ6S8J3 1075 aa9.64□□□□□ -0.87
CAST-229ENST00000510098 PSDA5PKW4 1024 aaPredicted RBP9.63□□□□□ -0.87
CAST-229ENST00000510098 PBX2P40425 430 aa9.63□□□□□ -0.87
CAST-229ENST00000510098 MAP3K9P80192 1104 aa9.61□□□□□ -0.87
CAST-229ENST00000510098 E2F4Q16254 413 aa9.6□□□□□ -0.87
CAST-229ENST00000510098 LSM11P83369 360 aaKnown RBP eCLIP9.59□□□□□ -0.87
CAST-229ENST00000510098 DPYSL4O14531 572 aa9.58□□□□□ -0.88
CAST-229ENST00000510098 EVI5O60447 810 aa9.58□□□□□ -0.88
CAST-229ENST00000510098 PTGER2P43116 358 aa9.58□□□□□ -0.88
CAST-229ENST00000510098 ANO8Q9HCE9 1232 aaPredicted RBP9.56□□□□□ -0.88
CAST-229ENST00000510098 ARHGAP33O14559 1287 aa9.55□□□□□ -0.88
CAST-229ENST00000510098 ANKRD13DQ6ZTN6 518 aa9.53□□□□□ -0.88
CAST-229ENST00000510098 RNF166Q96A37 237 aaPredicted RBP9.53□□□□□ -0.88
CAST-229ENST00000510098 MYT1LQ9UL68 1186 aa9.53□□□□□ -0.88
CAST-229ENST00000510098 KDM2AQ9Y2K7 1162 aa9.53□□□□□ -0.88
CAST-229ENST00000510098 AXIN2Q9Y2T1 843 aa9.53□□□□□ -0.88
CAST-229ENST00000510098 PPP4R3BQ5MIZ7 849 aa9.52□□□□□ -0.89
CAST-229ENST00000510098 KCNV2Q8TDN2 545 aa9.51□□□□□ -0.89
CAST-229ENST00000510098 ARIH1Q9Y4X5 557 aaPredicted RBP9.51□□□□□ -0.89
CAST-229ENST00000510098 ZNF454Q8N9F8 522 aa9.5□□□□□ -0.89
CAST-229ENST00000510098 TK2O00142 265 aa9.49□□□□□ -0.89
CAST-229ENST00000510098 FOSBP53539 338 aa9.49□□□□□ -0.89
CAST-229ENST00000510098 PDIA6Q15084 440 aa9.49□□□□□ -0.89
CAST-229ENST00000510098 ADGRD1Q6QNK2 874 aa9.47□□□□□ -0.89
CAST-229ENST00000510098 JPH4Q96JJ6 628 aa9.47□□□□□ -0.89
CAST-229ENST00000510098 SPDYE16A6NNV3 312 aaPredicted RBP9.46□□□□□ -0.9
CAST-229ENST00000510098 PSEN2P49810 448 aa9.46□□□□□ -0.9
CAST-229ENST00000510098 DMRTA1Q5VZB9 504 aa9.46□□□□□ -0.9
CAST-229ENST00000510098 VSIG10Q8N0Z9 540 aa9.46□□□□□ -0.9
CAST-229ENST00000510098 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.9
CAST-229ENST00000510098 BCL2L12Q9HB09 334 aa9.46□□□□□ -0.9
CAST-229ENST00000510098 HRO43593 1189 aa9.45□□□□□ -0.9
CAST-229ENST00000510098 DDX12PQ92771 950 aa9.45□□□□□ -0.9
CAST-229ENST00000510098 PCDHGA10Q9Y5H3 936 aa9.45□□□□□ -0.9
CAST-229ENST00000510098 P3H3Q8IVL6 736 aa9.43□□□□□ -0.9
CAST-229ENST00000510098 ZDHHC16Q969W1 377 aa9.43□□□□□ -0.9
CAST-229ENST00000510098 SLC4A5Q9BY07 1137 aa9.43□□□□□ -0.9
CAST-229ENST00000510098 PHF14O94880 888 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms