RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 FRMPD1Q5SYB0 1578 aa31.04■■■□□ 2.56
FGFR4-211ENST00000509511 SUPT6HQ7KZ85 1726 aaKnown RBP31.04■■■□□ 2.56
FGFR4-211ENST00000509511 DENND4BO75064 1496 aaPredicted RBP31.03■■■□□ 2.56
FGFR4-211ENST00000509511 EFCAB2Q5VUJ9 269 aa31.03■■■□□ 2.56
FGFR4-211ENST00000509511 LRRC9Q6ZRR7 1453 aa31.02■■■□□ 2.56
FGFR4-211ENST00000509511 ITSN2Q9NZM3 1697 aa31■■■□□ 2.55
FGFR4-211ENST00000509511 RICTORQ6R327 1708 aa31■■■□□ 2.55
FGFR4-211ENST00000509511 CCNB3Q8WWL7 1395 aa30.99■■■□□ 2.55
FGFR4-211ENST00000509511 GPATCH8Q9UKJ3 1502 aaKnown RBP30.98■■■□□ 2.55
FGFR4-211ENST00000509511 POGZQ7Z3K3 1410 aa30.96■■■□□ 2.55
FGFR4-211ENST00000509511 NCOA2Q15596 1464 aa30.96■■■□□ 2.55
FGFR4-211ENST00000509511 APLP2Q06481 763 aa30.96■■■□□ 2.55
FGFR4-211ENST00000509511 SCAPERQ9BY12 1400 aa30.95■■■□□ 2.55
FGFR4-211ENST00000509511 ABCC1P33527 1531 aa30.95■■■□□ 2.55
FGFR4-211ENST00000509511 RAPGEF3O95398 923 aa30.95■■■□□ 2.54
FGFR4-211ENST00000509511 ZMYM4Q5VZL5 1548 aa30.93■■■□□ 2.54
FGFR4-211ENST00000509511 SAMD9LQ8IVG5 1584 aa30.89■■■□□ 2.53
FGFR4-211ENST00000509511 ARHGEF40Q8TER5 1519 aa30.89■■■□□ 2.53
FGFR4-211ENST00000509511 ZNF518AQ6AHZ1 1483 aa30.88■■■□□ 2.53
FGFR4-211ENST00000509511 CFDP1Q9UEE9 299 aaPredicted RBP30.85■■■□□ 2.53
FGFR4-211ENST00000509511 PLEKHH2Q8IVE3 1493 aa30.84■■■□□ 2.53
FGFR4-211ENST00000509511 KDM5CP41229 1560 aa30.83■■■□□ 2.53
FGFR4-211ENST00000509511 KANK4Q5T7N3 995 aaPredicted RBP30.83■■■□□ 2.53
FGFR4-211ENST00000509511 SYCP2Q9BX26 1530 aa30.83■■■□□ 2.53
FGFR4-211ENST00000509511 ZFYVE16Q7Z3T8 1539 aa30.82■■■□□ 2.52
FGFR4-211ENST00000509511 MAGI2Q86UL8 1455 aa30.82■■■□□ 2.52
FGFR4-211ENST00000509511 ZNF777Q9ULD5 760 aaPredicted RBP30.81■■■□□ 2.52
FGFR4-211ENST00000509511 ARHGEF12Q9NZN5 1544 aa30.79■■■□□ 2.52
FGFR4-211ENST00000509511 HECW2Q9P2P5 1572 aa30.78■■■□□ 2.52
FGFR4-211ENST00000509511 KIAA1107Q9UPP5 1409 aa30.77■■■□□ 2.52
FGFR4-211ENST00000509511 TRAPPC8Q9Y2L5 1435 aa30.75■■■□□ 2.51
FGFR4-211ENST00000509511 MYOM3Q5VTT5 1437 aa30.72■■■□□ 2.51
FGFR4-211ENST00000509511 YEATS2Q9ULM3 1422 aa30.72■■■□□ 2.51
FGFR4-211ENST00000509511 CAMSAP2Q08AD1 1489 aa30.72■■■□□ 2.51
FGFR4-211ENST00000509511 AFAP1Q8N556 730 aa30.7■■■□□ 2.5
FGFR4-211ENST00000509511 MLH3Q9UHC1 1453 aa30.68■■■□□ 2.5
FGFR4-211ENST00000509511 MIA2Q96PC5 1412 aa30.66■■■□□ 2.5
FGFR4-211ENST00000509511 ZNF644Q9H582 1327 aaPredicted RBP30.64■■■□□ 2.5
FGFR4-211ENST00000509511 ABCA6Q8N139 1617 aa30.64■■■□□ 2.5
FGFR4-211ENST00000509511 DIP2CQ9Y2E4 1556 aa30.64■■■□□ 2.5
FGFR4-211ENST00000509511 C9orf84Q5VXU9 1444 aa30.63■■■□□ 2.49
FGFR4-211ENST00000509511 HNRNPMP52272 730 aaKnown RBP eCLIP30.63■■■□□ 2.49
FGFR4-211ENST00000509511 INO80Q9ULG1 1556 aaPredicted RBP30.62■■■□□ 2.49
FGFR4-211ENST00000509511 MYT1LQ9UL68 1186 aa30.62■■■□□ 2.49
FGFR4-211ENST00000509511 MBD5Q9P267 1494 aa30.62■■■□□ 2.49
FGFR4-211ENST00000509511 ATP10AO60312 1499 aa30.61■■■□□ 2.49
FGFR4-211ENST00000509511 CCDC141Q6ZP82 1450 aa30.6■■■□□ 2.49
FGFR4-211ENST00000509511 KIDINS220Q9ULH0 1771 aa30.6■■■□□ 2.49
FGFR4-211ENST00000509511 ATP7AQ04656 1500 aa30.6■■■□□ 2.49
FGFR4-211ENST00000509511 ARHGEF5Q12774 1597 aa30.59■■■□□ 2.49
FGFR4-211ENST00000509511 SPAG9O60271 1321 aaKnown RBP30.57■■■□□ 2.49
FGFR4-211ENST00000509511 REREQ9P2R6 1566 aa30.57■■■□□ 2.49
FGFR4-211ENST00000509511 ARID4BQ4LE39 1312 aaPredicted RBP30.56■■■□□ 2.48
FGFR4-211ENST00000509511 PTPN23Q9H3S7 1636 aa30.55■■■□□ 2.48
FGFR4-211ENST00000509511 FGD6Q6ZV73 1430 aa30.55■■■□□ 2.48
FGFR4-211ENST00000509511 KDM4FA0A1W2PPD8 638 aa30.54■■■□□ 2.48
FGFR4-211ENST00000509511 BCORL1Q5H9F3 1711 aa30.54■■■□□ 2.48
FGFR4-211ENST00000509511 SIGLEC1Q9BZZ2 1709 aa30.54■■■□□ 2.48
FGFR4-211ENST00000509511 RSPH4AQ5TD94 716 aa30.48■■■□□ 2.47
FGFR4-211ENST00000509511 AEBP2Q6ZN18 517 aaPredicted RBP30.48■■■□□ 2.47
FGFR4-211ENST00000509511 ADAMTSL3P82987 1691 aa30.48■■■□□ 2.47
FGFR4-211ENST00000509511 TCOF1Q13428 1488 aaKnown RBP30.48■■■□□ 2.47
FGFR4-211ENST00000509511 RTEL1-TNFRSF6BF6WH68 1400 aa30.47■■■□□ 2.47
FGFR4-211ENST00000509511 ADGBQ8N7X0 1667 aa30.45■■■□□ 2.46
FGFR4-211ENST00000509511 AGLP35573 1532 aa30.43■■■□□ 2.46
FGFR4-211ENST00000509511 MADDQ8WXG6 1647 aa30.43■■■□□ 2.46
FGFR4-211ENST00000509511 MAST1Q9Y2H9 1570 aa30.43■■■□□ 2.46
FGFR4-211ENST00000509511 CROCC2H7BZ55 1655 aa30.42■■■□□ 2.46
FGFR4-211ENST00000509511 PLXNC1O60486 1568 aa30.42■■■□□ 2.46
FGFR4-211ENST00000509511 DNMT1P26358 1616 aaKnown RBP30.4■■■□□ 2.46
FGFR4-211ENST00000509511 A2MP01023 1474 aa30.39■■■□□ 2.46
FGFR4-211ENST00000509511 SHANK2Q9UPX8 1470 aa30.39■■■□□ 2.45
FGFR4-211ENST00000509511 TSPY4P0CV99 314 aa30.37■■■□□ 2.45
FGFR4-211ENST00000509511 TSPY10P0CW01 314 aa30.37■■■□□ 2.45
FGFR4-211ENST00000509511 FER1L4A9Z1Z3 1794 aa30.36■■■□□ 2.45
FGFR4-211ENST00000509511 DAPK1P53355 1430 aa30.33■■■□□ 2.45
FGFR4-211ENST00000509511 RIMS1Q86UR5 1692 aaKnown RBP30.33■■■□□ 2.45
FGFR4-211ENST00000509511 PPARGC1BQ86YN6 1023 aaKnown RBP30.33■■■□□ 2.45
FGFR4-211ENST00000509511 MLECQ14165 292 aa30.32■■■□□ 2.44
FGFR4-211ENST00000509511 ABCC5O15440 1437 aa30.31■■■□□ 2.44
FGFR4-211ENST00000509511 PTPRMP28827 1452 aa30.29■■■□□ 2.44
FGFR4-211ENST00000509511 FAM50AQ14320 339 aaKnown RBP30.28■■■□□ 2.44
FGFR4-211ENST00000509511 DHX29Q7Z478 1369 aaKnown RBP30.25■■■□□ 2.43
FGFR4-211ENST00000509511 DUOX2Q9NRD8 1548 aa30.19■■■□□ 2.42
FGFR4-211ENST00000509511 EIF2AK4Q9P2K8 1649 aaKnown RBP30.19■■■□□ 2.42
FGFR4-211ENST00000509511 KIF15Q9NS87 1388 aa30.18■■■□□ 2.42
FGFR4-211ENST00000509511 CNTLNQ9NXG0 1405 aa30.17■■■□□ 2.42
FGFR4-211ENST00000509511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.16■■■□□ 2.42
FGFR4-211ENST00000509511 ESF1Q9H501 851 aaKnown RBP30.16■■■□□ 2.42
FGFR4-211ENST00000509511 ADGRL2O95490 1459 aa30.15■■■□□ 2.42
FGFR4-211ENST00000509511 RRBP1Q9P2E9 1410 aaKnown RBP30.15■■■□□ 2.42
FGFR4-211ENST00000509511 ANKRD30AQ9BXX3 1397 aa30.15■■■□□ 2.42
FGFR4-211ENST00000509511 FAM135AQ9P2D6 1515 aa30.12■■■□□ 2.41
FGFR4-211ENST00000509511 RNF17Q9BXT8 1623 aaKnown RBP30.12■■■□□ 2.41
FGFR4-211ENST00000509511 ERBINQ96RT1 1412 aa30.12■■■□□ 2.41
FGFR4-211ENST00000509511 MROH2AA6NES4 1674 aa30.11■■■□□ 2.41
FGFR4-211ENST00000509511 KIF3BO15066 747 aa30.09■■■□□ 2.41
FGFR4-211ENST00000509511 CLTCQ00610 1675 aaKnown RBP30.08■■■□□ 2.41
FGFR4-211ENST00000509511 NCOA1Q15788 1441 aa30.08■■■□□ 2.41
FGFR4-211ENST00000509511 GGT6Q6P531 493 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms