RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 DPY19L2Q6NUT2 758 aa11.8□□□□□ -0.52
CALCOCO2-212ENST00000509014 OCEL1Q9H607 264 aa11.8□□□□□ -0.52
CALCOCO2-212ENST00000509014 TSHZ2Q9NRE2 1034 aa11.8□□□□□ -0.52
CALCOCO2-212ENST00000509014 CCDC180Q9P1Z9 1646 aa11.79□□□□□ -0.52
CALCOCO2-212ENST00000509014 CADPS2Q86UW7 1296 aa11.72□□□□□ -0.53
CALCOCO2-212ENST00000509014 CDAN1Q8IWY9 1227 aa11.72□□□□□ -0.53
CALCOCO2-212ENST00000509014 ST18O60284 1047 aa11.7□□□□□ -0.54
CALCOCO2-212ENST00000509014 MICALL2Q8IY33 904 aa11.68□□□□□ -0.54
CALCOCO2-212ENST00000509014 TMEM121BQ9BXQ6 578 aaPredicted RBP11.67□□□□□ -0.54
CALCOCO2-212ENST00000509014 KDM2AQ9Y2K7 1162 aa11.67□□□□□ -0.54
CALCOCO2-212ENST00000509014 BOLA1Q9Y3E2 137 aa11.66□□□□□ -0.54
CALCOCO2-212ENST00000509014 VSIG10Q8N0Z9 540 aa11.64□□□□□ -0.55
CALCOCO2-212ENST00000509014 L3MBTL3Q96JM7 780 aaPredicted RBP11.63□□□□□ -0.55
CALCOCO2-212ENST00000509014 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
CALCOCO2-212ENST00000509014 NCKAP5LQ9HCH0 1330 aa11.6□□□□□ -0.55
CALCOCO2-212ENST00000509014 CRISPLD2Q9H0B8 497 aa11.58□□□□□ -0.56
CALCOCO2-212ENST00000509014 G3V3G9 751 aa11.57□□□□□ -0.56
CALCOCO2-212ENST00000509014 SNPHO15079 494 aa11.56□□□□□ -0.56
CALCOCO2-212ENST00000509014 TMEM92Q6UXU6 159 aa11.55□□□□□ -0.56
CALCOCO2-212ENST00000509014 C3orf67Q6ZVT6 689 aa11.53□□□□□ -0.56
CALCOCO2-212ENST00000509014 MARVELD3Q96A59 401 aa11.53□□□□□ -0.56
CALCOCO2-212ENST00000509014 KIF3CO14782 793 aa11.51□□□□□ -0.57
CALCOCO2-212ENST00000509014 PDE4AP27815 886 aa11.5□□□□□ -0.57
CALCOCO2-212ENST00000509014 MFSD10Q14728 455 aa11.5□□□□□ -0.57
CALCOCO2-212ENST00000509014 LARP6Q9BRS8 491 aaKnown RBP11.5□□□□□ -0.57
CALCOCO2-212ENST00000509014 GPHNQ9NQX3 736 aaPredicted RBP11.5□□□□□ -0.57
CALCOCO2-212ENST00000509014 C2orf72A6NCS6 295 aa11.48□□□□□ -0.57
CALCOCO2-212ENST00000509014 TMC2Q8TDI7 906 aa11.46□□□□□ -0.57
CALCOCO2-212ENST00000509014 DSG2Q14126 1118 aa11.45□□□□□ -0.58
CALCOCO2-212ENST00000509014 DDX27Q96GQ7 796 aaKnown RBP11.45□□□□□ -0.58
CALCOCO2-212ENST00000509014 FOXK1P85037 733 aa11.43□□□□□ -0.58
CALCOCO2-212ENST00000509014 PPP1R15BQ5SWA1 713 aa11.43□□□□□ -0.58
CALCOCO2-212ENST00000509014 WDR70Q9NW82 654 aa11.43□□□□□ -0.58
CALCOCO2-212ENST00000509014 SPNS2Q8IVW8 549 aa11.42□□□□□ -0.58
CALCOCO2-212ENST00000509014 EMP3P54852 163 aa11.41□□□□□ -0.58
CALCOCO2-212ENST00000509014 MMRN1Q13201 1228 aa11.41□□□□□ -0.58
CALCOCO2-212ENST00000509014 PLPP6Q8IY26 295 aa11.38□□□□□ -0.59
CALCOCO2-212ENST00000509014 KCNV2Q8TDN2 545 aa11.38□□□□□ -0.59
CALCOCO2-212ENST00000509014 CAMK2BQ13554 666 aa11.37□□□□□ -0.59
CALCOCO2-212ENST00000509014 E2F4Q16254 413 aa11.37□□□□□ -0.59
CALCOCO2-212ENST00000509014 FAM205CA6NFA0 338 aa11.34□□□□□ -0.59
CALCOCO2-212ENST00000509014 RB1CC1Q8TDY2 1594 aa11.33□□□□□ -0.6
CALCOCO2-212ENST00000509014 EMILIN3Q9NT22 766 aa11.33□□□□□ -0.6
CALCOCO2-212ENST00000509014 P3H3Q8IVL6 736 aa11.32□□□□□ -0.6
CALCOCO2-212ENST00000509014 HS3ST6Q96QI5 342 aa11.32□□□□□ -0.6
CALCOCO2-212ENST00000509014 POTEB3A0JP26 581 aa11.31□□□□□ -0.6
CALCOCO2-212ENST00000509014 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
CALCOCO2-212ENST00000509014 ARIH1Q9Y4X5 557 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO2-212ENST00000509014 HOXB3P14651 431 aaPredicted RBP11.26□□□□□ -0.61
CALCOCO2-212ENST00000509014 ARHGEF1Q92888 912 aaKnown RBP11.26□□□□□ -0.61
CALCOCO2-212ENST00000509014 KRTAP3-3Q9BYR6 98 aa11.26□□□□□ -0.61
CALCOCO2-212ENST00000509014 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
CALCOCO2-212ENST00000509014 SLC34A2O95436 690 aa11.25□□□□□ -0.61
CALCOCO2-212ENST00000509014 OXER1Q8TDS5 423 aa11.25□□□□□ -0.61
CALCOCO2-212ENST00000509014 DPYSL4O14531 572 aa11.23□□□□□ -0.61
CALCOCO2-212ENST00000509014 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
CALCOCO2-212ENST00000509014 PTCD2Q8WV60 388 aaKnown RBP11.23□□□□□ -0.61
CALCOCO2-212ENST00000509014 UPF1Q92900 1129 aaKnown RBP eCLIP11.22□□□□□ -0.61
CALCOCO2-212ENST00000509014 UNC13AQ9UPW8 1703 aa11.22□□□□□ -0.61
CALCOCO2-212ENST00000509014 DOK7Q18PE1 504 aa11.18□□□□□ -0.62
CALCOCO2-212ENST00000509014 BCANQ96GW7 911 aa11.18□□□□□ -0.62
CALCOCO2-212ENST00000509014 NACADO15069 1562 aa11.18□□□□□ -0.62
CALCOCO2-212ENST00000509014 HOXB1P14653 301 aaPredicted RBP11.17□□□□□ -0.62
CALCOCO2-212ENST00000509014 PDIA6Q15084 440 aa11.17□□□□□ -0.62
CALCOCO2-212ENST00000509014 PCDHGA4Q9Y5G9 962 aa11.17□□□□□ -0.62
CALCOCO2-212ENST00000509014 ERBB3P21860 1342 aa11.16□□□□□ -0.62
CALCOCO2-212ENST00000509014 NBR1Q14596 966 aa11.16□□□□□ -0.62
CALCOCO2-212ENST00000509014 MAP3K9P80192 1104 aa11.15□□□□□ -0.62
CALCOCO2-212ENST00000509014 KDM4FA0A1W2PPD8 638 aa11.13□□□□□ -0.63
CALCOCO2-212ENST00000509014 SEMA3EO15041 775 aa11.13□□□□□ -0.63
CALCOCO2-212ENST00000509014 GPR153Q6NV75 609 aa11.13□□□□□ -0.63
CALCOCO2-212ENST00000509014 SPDYE16A6NNV3 312 aaPredicted RBP11.12□□□□□ -0.63
CALCOCO2-212ENST00000509014 RIMBP2O15034 1052 aa11.12□□□□□ -0.63
CALCOCO2-212ENST00000509014 KHSRPQ92945 711 aaKnown RBP eCLIP11.12□□□□□ -0.63
CALCOCO2-212ENST00000509014 ZSWIM6Q9HCJ5 1215 aa11.12□□□□□ -0.63
CALCOCO2-212ENST00000509014 TBC1D12O60347 775 aa11.11□□□□□ -0.63
CALCOCO2-212ENST00000509014 EVI5O60447 810 aa11.11□□□□□ -0.63
CALCOCO2-212ENST00000509014 ARSIQ5FYB1 569 aa11.11□□□□□ -0.63
CALCOCO2-212ENST00000509014 TESPA1A2RU30 521 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO2-212ENST00000509014 BICRAQ9NZM4 1560 aa11.08□□□□□ -0.64
CALCOCO2-212ENST00000509014 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
CALCOCO2-212ENST00000509014 ANO8Q9HCE9 1232 aaPredicted RBP11.08□□□□□ -0.64
CALCOCO2-212ENST00000509014 NUDT7P0C024 238 aa11.07□□□□□ -0.64
CALCOCO2-212ENST00000509014 MLLT3P42568 568 aaPredicted RBP11.07□□□□□ -0.64
CALCOCO2-212ENST00000509014 PTGER2P43116 358 aa11.05□□□□□ -0.64
CALCOCO2-212ENST00000509014 ZNF316A6NFI3 1004 aaPredicted RBP11.02□□□□□ -0.65
CALCOCO2-212ENST00000509014 DDX12PQ92771 950 aa11.01□□□□□ -0.65
CALCOCO2-212ENST00000509014 RNF166Q96A37 237 aaPredicted RBP10.99□□□□□ -0.65
CALCOCO2-212ENST00000509014 LHX6Q9UPM6 363 aa10.99□□□□□ -0.65
CALCOCO2-212ENST00000509014 GRXCR2A6NFK2 248 aa10.98□□□□□ -0.65
CALCOCO2-212ENST00000509014 PRIM1P49642 420 aaKnown RBP10.97□□□□□ -0.65
CALCOCO2-212ENST00000509014 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.97□□□□□ -0.65
CALCOCO2-212ENST00000509014 ZNF687Q8N1G0 1237 aa10.97□□□□□ -0.65
CALCOCO2-212ENST00000509014 OSBPP22059 807 aa10.96□□□□□ -0.65
CALCOCO2-212ENST00000509014 FOSBP53539 338 aa10.96□□□□□ -0.65
CALCOCO2-212ENST00000509014 JPH4Q96JJ6 628 aa10.96□□□□□ -0.65
CALCOCO2-212ENST00000509014 PCDHGA10Q9Y5H3 936 aa10.96□□□□□ -0.65
CALCOCO2-212ENST00000509014 MYT1LQ9UL68 1186 aa10.95□□□□□ -0.66
CALCOCO2-212ENST00000509014 PHF14O94880 888 aa10.94□□□□□ -0.66
CALCOCO2-212ENST00000509014 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms