RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 CDC42BPBQ9Y5S2 1711 aa16.75■□□□□ 0.27
POLR2J3-213ENST00000508848 EHBP1L1Q8N3D4 1523 aa16.75■□□□□ 0.27
POLR2J3-213ENST00000508848 DENND4BO75064 1496 aaPredicted RBP16.73■□□□□ 0.27
POLR2J3-213ENST00000508848 CDC42BPAQ5VT25 1732 aa16.73■□□□□ 0.27
POLR2J3-213ENST00000508848 PREX2Q70Z35 1606 aa16.73■□□□□ 0.27
POLR2J3-213ENST00000508848 GPATCH8Q9UKJ3 1502 aaKnown RBP16.71■□□□□ 0.27
POLR2J3-213ENST00000508848 RICTORQ6R327 1708 aa16.71■□□□□ 0.27
POLR2J3-213ENST00000508848 MAGI2Q86UL8 1455 aa16.7■□□□□ 0.26
POLR2J3-213ENST00000508848 LRRC9Q6ZRR7 1453 aa16.69■□□□□ 0.26
POLR2J3-213ENST00000508848 ARHGAP5Q13017 1502 aa16.69■□□□□ 0.26
POLR2J3-213ENST00000508848 ADGRL1O94910 1474 aa16.68■□□□□ 0.26
POLR2J3-213ENST00000508848 SUPT6HQ7KZ85 1726 aaKnown RBP16.68■□□□□ 0.26
POLR2J3-213ENST00000508848 RAPGEF3O95398 923 aa16.68■□□□□ 0.26
POLR2J3-213ENST00000508848 ZMYM4Q5VZL5 1548 aa16.68■□□□□ 0.26
POLR2J3-213ENST00000508848 SCAPERQ9BY12 1400 aa16.68■□□□□ 0.26
POLR2J3-213ENST00000508848 KIAA1107Q9UPP5 1409 aa16.68■□□□□ 0.26
POLR2J3-213ENST00000508848 CCNB3Q8WWL7 1395 aa16.67■□□□□ 0.26
POLR2J3-213ENST00000508848 FRMPD1Q5SYB0 1578 aa16.67■□□□□ 0.26
POLR2J3-213ENST00000508848 APLP2Q06481 763 aa16.66■□□□□ 0.26
POLR2J3-213ENST00000508848 PLEKHH2Q8IVE3 1493 aa16.66■□□□□ 0.26
POLR2J3-213ENST00000508848 ITSN2Q9NZM3 1697 aa16.65■□□□□ 0.26
POLR2J3-213ENST00000508848 POGZQ7Z3K3 1410 aa16.65■□□□□ 0.26
POLR2J3-213ENST00000508848 CFDP1Q9UEE9 299 aaPredicted RBP16.64■□□□□ 0.25
POLR2J3-213ENST00000508848 ZNF518AQ6AHZ1 1483 aa16.64■□□□□ 0.25
POLR2J3-213ENST00000508848 NCOA2Q15596 1464 aa16.63■□□□□ 0.25
POLR2J3-213ENST00000508848 RSPH4AQ5TD94 716 aa16.62■□□□□ 0.25
POLR2J3-213ENST00000508848 KDM5CP41229 1560 aa16.62■□□□□ 0.25
POLR2J3-213ENST00000508848 ABCC1P33527 1531 aa16.61■□□□□ 0.25
POLR2J3-213ENST00000508848 MLH3Q9UHC1 1453 aa16.61■□□□□ 0.25
POLR2J3-213ENST00000508848 KANK4Q5T7N3 995 aaPredicted RBP16.6■□□□□ 0.25
POLR2J3-213ENST00000508848 MIA2Q96PC5 1412 aa16.59■□□□□ 0.25
POLR2J3-213ENST00000508848 SAMD9LQ8IVG5 1584 aa16.59■□□□□ 0.25
POLR2J3-213ENST00000508848 ARHGEF12Q9NZN5 1544 aa16.58■□□□□ 0.24
POLR2J3-213ENST00000508848 AFAP1Q8N556 730 aa16.57■□□□□ 0.24
POLR2J3-213ENST00000508848 ARHGEF40Q8TER5 1519 aa16.56■□□□□ 0.24
POLR2J3-213ENST00000508848 ZFYVE16Q7Z3T8 1539 aa16.55■□□□□ 0.24
POLR2J3-213ENST00000508848 MBD5Q9P267 1494 aa16.54■□□□□ 0.24
POLR2J3-213ENST00000508848 TRAPPC8Q9Y2L5 1435 aa16.54■□□□□ 0.24
POLR2J3-213ENST00000508848 ATP10AO60312 1499 aa16.54■□□□□ 0.24
POLR2J3-213ENST00000508848 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
POLR2J3-213ENST00000508848 HECW2Q9P2P5 1572 aa16.53■□□□□ 0.24
POLR2J3-213ENST00000508848 REREQ9P2R6 1566 aa16.53■□□□□ 0.24
POLR2J3-213ENST00000508848 MSH5O43196 834 aa16.53■□□□□ 0.24
POLR2J3-213ENST00000508848 KDM4FA0A1W2PPD8 638 aa16.52■□□□□ 0.24
POLR2J3-213ENST00000508848 HNRNPMP52272 730 aaKnown RBP eCLIP16.52■□□□□ 0.24
POLR2J3-213ENST00000508848 ZNF777Q9ULD5 760 aaPredicted RBP16.52■□□□□ 0.24
POLR2J3-213ENST00000508848 RTEL1-TNFRSF6BF6WH68 1400 aa16.52■□□□□ 0.23
POLR2J3-213ENST00000508848 KIDINS220Q9ULH0 1771 aa16.51■□□□□ 0.23
POLR2J3-213ENST00000508848 SYCP2Q9BX26 1530 aa16.5■□□□□ 0.23
POLR2J3-213ENST00000508848 YEATS2Q9ULM3 1422 aa16.5■□□□□ 0.23
POLR2J3-213ENST00000508848 ARHGEF5Q12774 1597 aa16.5■□□□□ 0.23
POLR2J3-213ENST00000508848 SPAG9O60271 1321 aaKnown RBP16.48■□□□□ 0.23
POLR2J3-213ENST00000508848 ZNF644Q9H582 1327 aaPredicted RBP16.48■□□□□ 0.23
POLR2J3-213ENST00000508848 C9orf84Q5VXU9 1444 aa16.48■□□□□ 0.23
POLR2J3-213ENST00000508848 AGLP35573 1532 aa16.47■□□□□ 0.23
POLR2J3-213ENST00000508848 CAMSAP2Q08AD1 1489 aa16.47■□□□□ 0.23
POLR2J3-213ENST00000508848 ADAMTSL3P82987 1691 aa16.46■□□□□ 0.23
POLR2J3-213ENST00000508848 BCORL1Q5H9F3 1711 aa16.46■□□□□ 0.23
POLR2J3-213ENST00000508848 DIP2CQ9Y2E4 1556 aa16.46■□□□□ 0.23
POLR2J3-213ENST00000508848 CCDC141Q6ZP82 1450 aa16.45■□□□□ 0.22
POLR2J3-213ENST00000508848 INO80Q9ULG1 1556 aaPredicted RBP16.45■□□□□ 0.22
POLR2J3-213ENST00000508848 TSPY4P0CV99 314 aa16.44■□□□□ 0.22
POLR2J3-213ENST00000508848 TSPY10P0CW01 314 aa16.44■□□□□ 0.22
POLR2J3-213ENST00000508848 ATP7AQ04656 1500 aa16.44■□□□□ 0.22
POLR2J3-213ENST00000508848 TCOF1Q13428 1488 aaKnown RBP16.43■□□□□ 0.22
POLR2J3-213ENST00000508848 FGD6Q6ZV73 1430 aa16.43■□□□□ 0.22
POLR2J3-213ENST00000508848 ABCA6Q8N139 1617 aa16.42■□□□□ 0.22
POLR2J3-213ENST00000508848 ADGBQ8N7X0 1667 aa16.41■□□□□ 0.22
POLR2J3-213ENST00000508848 MAST1Q9Y2H9 1570 aa16.41■□□□□ 0.22
POLR2J3-213ENST00000508848 ARID4BQ4LE39 1312 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-213ENST00000508848 PTPN23Q9H3S7 1636 aa16.41■□□□□ 0.22
POLR2J3-213ENST00000508848 MYT1LQ9UL68 1186 aa16.4■□□□□ 0.22
POLR2J3-213ENST00000508848 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
POLR2J3-213ENST00000508848 SIGLEC1Q9BZZ2 1709 aa16.39■□□□□ 0.21
POLR2J3-213ENST00000508848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.38■□□□□ 0.21
POLR2J3-213ENST00000508848 PLXNC1O60486 1568 aa16.38■□□□□ 0.21
POLR2J3-213ENST00000508848 A2MP01023 1474 aa16.37■□□□□ 0.21
POLR2J3-213ENST00000508848 DHX29Q7Z478 1369 aaKnown RBP16.37■□□□□ 0.21
POLR2J3-213ENST00000508848 SHANK2Q9UPX8 1470 aa16.36■□□□□ 0.21
POLR2J3-213ENST00000508848 SETD1BQ9UPS6 1966 aaKnown RBP16.35■□□□□ 0.21
POLR2J3-213ENST00000508848 ABCC5O15440 1437 aa16.34■□□□□ 0.21
POLR2J3-213ENST00000508848 DNMT1P26358 1616 aaKnown RBP16.34■□□□□ 0.21
POLR2J3-213ENST00000508848 PTPRMP28827 1452 aa16.32■□□□□ 0.2
POLR2J3-213ENST00000508848 CROCC2H7BZ55 1655 aa16.31■□□□□ 0.2
POLR2J3-213ENST00000508848 MADDQ8WXG6 1647 aa16.31■□□□□ 0.2
POLR2J3-213ENST00000508848 DAPK1P53355 1430 aa16.31■□□□□ 0.2
POLR2J3-213ENST00000508848 CNTLNQ9NXG0 1405 aa16.31■□□□□ 0.2
POLR2J3-213ENST00000508848 FER1L4A9Z1Z3 1794 aa16.31■□□□□ 0.2
POLR2J3-213ENST00000508848 FAM135AQ9P2D6 1515 aa16.3■□□□□ 0.2
POLR2J3-213ENST00000508848 DUOX2Q9NRD8 1548 aa16.27■□□□□ 0.2
POLR2J3-213ENST00000508848 ADGRL2O95490 1459 aa16.27■□□□□ 0.19
POLR2J3-213ENST00000508848 MROH2AA6NES4 1674 aa16.27■□□□□ 0.19
POLR2J3-213ENST00000508848 NCOA1Q15788 1441 aa16.27■□□□□ 0.19
POLR2J3-213ENST00000508848 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.19
POLR2J3-213ENST00000508848 RIMS1Q86UR5 1692 aaKnown RBP16.26■□□□□ 0.19
POLR2J3-213ENST00000508848 RRBP1Q9P2E9 1410 aaKnown RBP16.26■□□□□ 0.19
POLR2J3-213ENST00000508848 ANKRD30AQ9BXX3 1397 aa16.26■□□□□ 0.19
POLR2J3-213ENST00000508848 MLECQ14165 292 aa16.25■□□□□ 0.19
POLR2J3-213ENST00000508848 ESF1Q9H501 851 aaKnown RBP16.24■□□□□ 0.19
POLR2J3-213ENST00000508848 ROCK1Q13464 1354 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms