RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 MS4A4AQ96JQ5 239 aa7.02□□□□□ -1.29
HMGN1P11-201ENST00000508668 METRNQ9UJH8 293 aa7.02□□□□□ -1.29
HMGN1P11-201ENST00000508668 PPP1R37O75864 691 aa7.01□□□□□ -1.29
HMGN1P11-201ENST00000508668 C7P10643 843 aa7.01□□□□□ -1.29
HMGN1P11-201ENST00000508668 SMARCA2P51531 1590 aa7□□□□□ -1.29
HMGN1P11-201ENST00000508668 SEC24BO95487 1268 aa7□□□□□ -1.29
HMGN1P11-201ENST00000508668 IER5LQ5T953 404 aa7□□□□□ -1.29
HMGN1P11-201ENST00000508668 PLCG2P16885 1265 aa6.99□□□□□ -1.29
HMGN1P11-201ENST00000508668 IRX5P78411 483 aaPredicted RBP6.99□□□□□ -1.29
HMGN1P11-201ENST00000508668 NCAPD3P42695 1498 aa6.98□□□□□ -1.29
HMGN1P11-201ENST00000508668 DPY19L2Q6NUT2 758 aa6.98□□□□□ -1.29
HMGN1P11-201ENST00000508668 PDCD7Q8N8D1 485 aaKnown RBP6.98□□□□□ -1.29
HMGN1P11-201ENST00000508668 OCEL1Q9H607 264 aa6.98□□□□□ -1.29
HMGN1P11-201ENST00000508668 BAZ1BQ9UIG0 1483 aaKnown RBP6.98□□□□□ -1.29
HMGN1P11-201ENST00000508668 ILDR1Q86SU0 546 aaPredicted RBP6.97□□□□□ -1.29
HMGN1P11-201ENST00000508668 BAZ1AQ9NRL2 1556 aaPredicted RBP6.97□□□□□ -1.29
HMGN1P11-201ENST00000508668 COLQQ9Y215 455 aaPredicted RBP6.97□□□□□ -1.29
HMGN1P11-201ENST00000508668 CUX2O14529 1486 aa6.96□□□□□ -1.3
HMGN1P11-201ENST00000508668 ATAD2BQ9ULI0 1458 aa6.96□□□□□ -1.3
HMGN1P11-201ENST00000508668 VSIG10Q8N0Z9 540 aa6.95□□□□□ -1.3
HMGN1P11-201ENST00000508668 SMARCA4P51532 1647 aa6.94□□□□□ -1.3
HMGN1P11-201ENST00000508668 G3V3G9 751 aa6.94□□□□□ -1.3
HMGN1P11-201ENST00000508668 CADPS2Q86UW7 1296 aa6.94□□□□□ -1.3
HMGN1P11-201ENST00000508668 HMGXB3Q12766 1538 aa6.93□□□□□ -1.3
HMGN1P11-201ENST00000508668 POTEFA5A3E0 1075 aa6.93□□□□□ -1.3
HMGN1P11-201ENST00000508668 KDM2AQ9Y2K7 1162 aa6.92□□□□□ -1.3
HMGN1P11-201ENST00000508668 MICALL2Q8IY33 904 aa6.91□□□□□ -1.3
HMGN1P11-201ENST00000508668 BOLA1Q9Y3E2 137 aa6.91□□□□□ -1.3
HMGN1P11-201ENST00000508668 L3MBTL3Q96JM7 780 aaPredicted RBP6.9□□□□□ -1.3
HMGN1P11-201ENST00000508668 PDS5BQ9NTI5 1447 aa6.9□□□□□ -1.31
HMGN1P11-201ENST00000508668 CDAN1Q8IWY9 1227 aa6.87□□□□□ -1.31
HMGN1P11-201ENST00000508668 LAMC3Q9Y6N6 1575 aa6.86□□□□□ -1.31
HMGN1P11-201ENST00000508668 NCKAP5LQ9HCH0 1330 aa6.86□□□□□ -1.31
HMGN1P11-201ENST00000508668 TMEM121BQ9BXQ6 578 aaPredicted RBP6.86□□□□□ -1.31
HMGN1P11-201ENST00000508668 WDR70Q9NW82 654 aa6.86□□□□□ -1.31
HMGN1P11-201ENST00000508668 NESP48681 1621 aa6.86□□□□□ -1.31
HMGN1P11-201ENST00000508668 C3orf67Q6ZVT6 689 aa6.85□□□□□ -1.31
HMGN1P11-201ENST00000508668 LARP6Q9BRS8 491 aaKnown RBP6.85□□□□□ -1.31
HMGN1P11-201ENST00000508668 PDE4AP27815 886 aa6.84□□□□□ -1.31
HMGN1P11-201ENST00000508668 MROH2BQ7Z745 1585 aa6.83□□□□□ -1.32
HMGN1P11-201ENST00000508668 PEG3Q9GZU2 1588 aa6.83□□□□□ -1.32
HMGN1P11-201ENST00000508668 POTEJP0CG39 1038 aa6.83□□□□□ -1.32
HMGN1P11-201ENST00000508668 TMC2Q8TDI7 906 aa6.83□□□□□ -1.32
HMGN1P11-201ENST00000508668 CRISPLD2Q9H0B8 497 aa6.83□□□□□ -1.32
HMGN1P11-201ENST00000508668 CADPSQ9ULU8 1353 aa6.82□□□□□ -1.32
HMGN1P11-201ENST00000508668 DDX27Q96GQ7 796 aaKnown RBP6.82□□□□□ -1.32
HMGN1P11-201ENST00000508668 LCE2DQ5TA82 110 aaPredicted RBP6.81□□□□□ -1.32
HMGN1P11-201ENST00000508668 GPHNQ9NQX3 736 aaPredicted RBP6.81□□□□□ -1.32
HMGN1P11-201ENST00000508668 C2orf72A6NCS6 295 aa6.8□□□□□ -1.32
HMGN1P11-201ENST00000508668 TMEM92Q6UXU6 159 aa6.8□□□□□ -1.32
HMGN1P11-201ENST00000508668 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.8□□□□□ -1.32
HMGN1P11-201ENST00000508668 DSG2Q14126 1118 aa6.79□□□□□ -1.32
HMGN1P11-201ENST00000508668 MFSD10Q14728 455 aa6.79□□□□□ -1.32
HMGN1P11-201ENST00000508668 PPP1R15BQ5SWA1 713 aa6.79□□□□□ -1.32
HMGN1P11-201ENST00000508668 MRC2Q9UBG0 1479 aa6.79□□□□□ -1.32
HMGN1P11-201ENST00000508668 CEP164Q9UPV0 1460 aa6.79□□□□□ -1.32
HMGN1P11-201ENST00000508668 KIF3CO14782 793 aa6.77□□□□□ -1.33
HMGN1P11-201ENST00000508668 P3H3Q8IVL6 736 aa6.77□□□□□ -1.33
HMGN1P11-201ENST00000508668 KCNV2Q8TDN2 545 aa6.77□□□□□ -1.33
HMGN1P11-201ENST00000508668 KIF21AQ7Z4S6 1674 aa6.77□□□□□ -1.33
HMGN1P11-201ENST00000508668 FOXK1P85037 733 aa6.76□□□□□ -1.33
HMGN1P11-201ENST00000508668 E2F4Q16254 413 aa6.76□□□□□ -1.33
HMGN1P11-201ENST00000508668 PLPP6Q8IY26 295 aa6.76□□□□□ -1.33
HMGN1P11-201ENST00000508668 THOC2Q8NI27 1593 aaKnown RBP6.76□□□□□ -1.33
HMGN1P11-201ENST00000508668 WIZO95785 1651 aa6.76□□□□□ -1.33
HMGN1P11-201ENST00000508668 SLAIN1Q8ND83 568 aa6.75□□□□□ -1.33
HMGN1P11-201ENST00000508668 FANCD2Q9BXW9 1451 aa6.74□□□□□ -1.33
HMGN1P11-201ENST00000508668 BCANQ96GW7 911 aa6.72□□□□□ -1.33
HMGN1P11-201ENST00000508668 WDR62O43379 1518 aa6.71□□□□□ -1.33
HMGN1P11-201ENST00000508668 TOP2AP11388 1531 aaKnown RBP6.71□□□□□ -1.33
HMGN1P11-201ENST00000508668 RSF1Q96T23 1441 aaPredicted RBP6.71□□□□□ -1.34
HMGN1P11-201ENST00000508668 CAMK2BQ13554 666 aa6.71□□□□□ -1.34
HMGN1P11-201ENST00000508668 NBR1Q14596 966 aa6.71□□□□□ -1.34
HMGN1P11-201ENST00000508668 ST18O60284 1047 aa6.7□□□□□ -1.34
HMGN1P11-201ENST00000508668 MMRN1Q13201 1228 aa6.7□□□□□ -1.34
HMGN1P11-201ENST00000508668 UPF1Q92900 1129 aaKnown RBP eCLIP6.7□□□□□ -1.34
HMGN1P11-201ENST00000508668 EMILIN3Q9NT22 766 aa6.7□□□□□ -1.34
HMGN1P11-201ENST00000508668 CFTRP13569 1480 aa6.69□□□□□ -1.34
HMGN1P11-201ENST00000508668 SNPHO15079 494 aa6.69□□□□□ -1.34
HMGN1P11-201ENST00000508668 ARHGEF1Q92888 912 aaKnown RBP6.69□□□□□ -1.34
HMGN1P11-201ENST00000508668 DPYSL4O14531 572 aa6.68□□□□□ -1.34
HMGN1P11-201ENST00000508668 SPNS2Q8IVW8 549 aa6.67□□□□□ -1.34
HMGN1P11-201ENST00000508668 ABCC8Q09428 1581 aa6.66□□□□□ -1.34
HMGN1P11-201ENST00000508668 MAP3K9P80192 1104 aa6.66□□□□□ -1.34
HMGN1P11-201ENST00000508668 DOK7Q18PE1 504 aa6.64□□□□□ -1.35
HMGN1P11-201ENST00000508668 OXER1Q8TDS5 423 aa6.64□□□□□ -1.35
HMGN1P11-201ENST00000508668 ARIH1Q9Y4X5 557 aaPredicted RBP6.64□□□□□ -1.35
HMGN1P11-201ENST00000508668 IFT140Q96RY7 1462 aa6.64□□□□□ -1.35
HMGN1P11-201ENST00000508668 SEMA3EO15041 775 aa6.63□□□□□ -1.35
HMGN1P11-201ENST00000508668 TBC1D12O60347 775 aa6.63□□□□□ -1.35
HMGN1P11-201ENST00000508668 HOXB3P14651 431 aaPredicted RBP6.63□□□□□ -1.35
HMGN1P11-201ENST00000508668 CCDC88BA6NC98 1476 aa6.62□□□□□ -1.35
HMGN1P11-201ENST00000508668 SLC34A2O95436 690 aa6.62□□□□□ -1.35
HMGN1P11-201ENST00000508668 ZNF710Q8N1W2 664 aa6.62□□□□□ -1.35
HMGN1P11-201ENST00000508668 PTCD2Q8WV60 388 aaKnown RBP6.62□□□□□ -1.35
HMGN1P11-201ENST00000508668 PCDHGA4Q9Y5G9 962 aa6.62□□□□□ -1.35
HMGN1P11-201ENST00000508668 URB2Q14146 1524 aaKnown RBP6.61□□□□□ -1.35
HMGN1P11-201ENST00000508668 RIMBP2O15034 1052 aa6.61□□□□□ -1.35
HMGN1P11-201ENST00000508668 PDIA6Q15084 440 aa6.61□□□□□ -1.35
HMGN1P11-201ENST00000508668 PRDM2Q13029 1718 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms