RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 CDK11AQ9UQ88 783 aaPredicted RBP26.49■■□□□ 1.83
LMNA-222ENST00000508500 RIMS1Q86UR5 1692 aaKnown RBP26.47■■□□□ 1.83
LMNA-222ENST00000508500 CDC42BPBQ9Y5S2 1711 aa26.47■■□□□ 1.83
LMNA-222ENST00000508500 CLIP1P30622 1438 aa26.46■■□□□ 1.83
LMNA-222ENST00000508500 LMTK3Q96Q04 1460 aa26.45■■□□□ 1.82
LMNA-222ENST00000508500 SCAPERQ9BY12 1400 aa26.45■■□□□ 1.82
LMNA-222ENST00000508500 YEATS2Q9ULM3 1422 aa26.44■■□□□ 1.82
LMNA-222ENST00000508500 ZFYVE16Q7Z3T8 1539 aa26.44■■□□□ 1.82
LMNA-222ENST00000508500 MAGI2Q86UL8 1455 aa26.43■■□□□ 1.82
LMNA-222ENST00000508500 CCDC18Q5T9S5 1454 aa26.42■■□□□ 1.82
LMNA-222ENST00000508500 FYCO1Q9BQS8 1478 aa26.41■■□□□ 1.82
LMNA-222ENST00000508500 POGZQ7Z3K3 1410 aa26.4■■□□□ 1.82
LMNA-222ENST00000508500 EFCAB2Q5VUJ9 269 aa26.39■■□□□ 1.82
LMNA-222ENST00000508500 CDC42BPAQ5VT25 1732 aa26.37■■□□□ 1.81
LMNA-222ENST00000508500 PREX2Q70Z35 1606 aa26.37■■□□□ 1.81
LMNA-222ENST00000508500 ARHGAP5Q13017 1502 aa26.37■■□□□ 1.81
LMNA-222ENST00000508500 ARID4BQ4LE39 1312 aaPredicted RBP26.36■■□□□ 1.81
LMNA-222ENST00000508500 FER1L4A9Z1Z3 1794 aa26.33■■□□□ 1.81
LMNA-222ENST00000508500 KDM5CP41229 1560 aa26.3■■□□□ 1.8
LMNA-222ENST00000508500 ARHGEF12Q9NZN5 1544 aa26.29■■□□□ 1.8
LMNA-222ENST00000508500 ITSN2Q9NZM3 1697 aa26.28■■□□□ 1.8
LMNA-222ENST00000508500 ZNF518AQ6AHZ1 1483 aa26.27■■□□□ 1.8
LMNA-222ENST00000508500 ATP10AO60312 1499 aa26.26■■□□□ 1.79
LMNA-222ENST00000508500 AFAP1Q8N556 730 aa26.26■■□□□ 1.79
LMNA-222ENST00000508500 ABCC1P33527 1531 aa26.25■■□□□ 1.79
LMNA-222ENST00000508500 FBXO41Q8TF61 875 aa26.23■■□□□ 1.79
LMNA-222ENST00000508500 C9orf84Q5VXU9 1444 aa26.22■■□□□ 1.79
LMNA-222ENST00000508500 CEP162Q5TB80 1403 aa26.22■■□□□ 1.79
LMNA-222ENST00000508500 TRAPPC8Q9Y2L5 1435 aa26.22■■□□□ 1.79
LMNA-222ENST00000508500 DIP2CQ9Y2E4 1556 aa26.2■■□□□ 1.79
LMNA-222ENST00000508500 ABCA6Q8N139 1617 aa26.2■■□□□ 1.78
LMNA-222ENST00000508500 GPATCH8Q9UKJ3 1502 aaKnown RBP26.19■■□□□ 1.78
LMNA-222ENST00000508500 SAMD9LQ8IVG5 1584 aa26.19■■□□□ 1.78
LMNA-222ENST00000508500 REREQ9P2R6 1566 aa26.19■■□□□ 1.78
LMNA-222ENST00000508500 KIDINS220Q9ULH0 1771 aa26.18■■□□□ 1.78
LMNA-222ENST00000508500 MLECQ14165 292 aa26.17■■□□□ 1.78
LMNA-222ENST00000508500 MLH3Q9UHC1 1453 aa26.17■■□□□ 1.78
LMNA-222ENST00000508500 PREX1Q8TCU6 1659 aa26.15■■□□□ 1.78
LMNA-222ENST00000508500 HSPA2P54652 639 aa26.14■■□□□ 1.78
LMNA-222ENST00000508500 LOC105371045A0A1W2PR82 267 aa26.12■■□□□ 1.77
LMNA-222ENST00000508500 SYCP2Q9BX26 1530 aa26.1■■□□□ 1.77
LMNA-222ENST00000508500 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
LMNA-222ENST00000508500 MTUS2Q5JR59 1369 aa26.08■■□□□ 1.77
LMNA-222ENST00000508500 TIAM1Q13009 1591 aa26.07■■□□□ 1.76
LMNA-222ENST00000508500 PLPPR3Q6T4P5 718 aa26.07■■□□□ 1.76
LMNA-222ENST00000508500 MYT1LQ9UL68 1186 aa26.07■■□□□ 1.76
LMNA-222ENST00000508500 AGLP35573 1532 aa26.07■■□□□ 1.76
LMNA-222ENST00000508500 EHBP1L1Q8N3D4 1523 aa26.07■■□□□ 1.76
LMNA-222ENST00000508500 SETD1BQ9UPS6 1966 aaKnown RBP26.06■■□□□ 1.76
LMNA-222ENST00000508500 STRCQ7RTU9 1775 aa26.06■■□□□ 1.76
LMNA-222ENST00000508500 CCNB3Q8WWL7 1395 aa26.05■■□□□ 1.76
LMNA-222ENST00000508500 HNRNPMP52272 730 aaKnown RBP eCLIP26.04■■□□□ 1.76
LMNA-222ENST00000508500 C3P01024 1663 aa26.03■■□□□ 1.76
LMNA-222ENST00000508500 CFDP1Q9UEE9 299 aaPredicted RBP26.02■■□□□ 1.76
LMNA-222ENST00000508500 KIAA1107Q9UPP5 1409 aa26■■□□□ 1.75
LMNA-222ENST00000508500 CEBPAP49715 358 aaPredicted RBP25.99■■□□□ 1.75
LMNA-222ENST00000508500 INO80Q9ULG1 1556 aaPredicted RBP25.99■■□□□ 1.75
LMNA-222ENST00000508500 ZNF644Q9H582 1327 aaPredicted RBP25.97■■□□□ 1.75
LMNA-222ENST00000508500 PLEKHH2Q8IVE3 1493 aa25.97■■□□□ 1.75
LMNA-222ENST00000508500 SUPT6HQ7KZ85 1726 aaKnown RBP25.97■■□□□ 1.75
LMNA-222ENST00000508500 ATP7AQ04656 1500 aa25.96■■□□□ 1.75
LMNA-222ENST00000508500 SPAG9O60271 1321 aaKnown RBP25.94■■□□□ 1.74
LMNA-222ENST00000508500 VPS8Q8N3P4 1428 aa25.94■■□□□ 1.74
LMNA-222ENST00000508500 NCOA2Q15596 1464 aa25.92■■□□□ 1.74
LMNA-222ENST00000508500 MBD5Q9P267 1494 aa25.92■■□□□ 1.74
LMNA-222ENST00000508500 PLXNC1O60486 1568 aa25.9■■□□□ 1.74
LMNA-222ENST00000508500 MROH2AA6NES4 1674 aa25.9■■□□□ 1.74
LMNA-222ENST00000508500 UHRF1BP1Q6BDS2 1440 aa25.89■■□□□ 1.74
LMNA-222ENST00000508500 CERKQ8TCT0 537 aa25.89■■□□□ 1.74
LMNA-222ENST00000508500 ADGBQ8N7X0 1667 aa25.87■■□□□ 1.73
LMNA-222ENST00000508500 A2MP01023 1474 aa25.85■■□□□ 1.73
LMNA-222ENST00000508500 LRRC9Q6ZRR7 1453 aa25.85■■□□□ 1.73
LMNA-222ENST00000508500 CNTLNQ9NXG0 1405 aa25.83■■□□□ 1.73
LMNA-222ENST00000508500 CAMSAP2Q08AD1 1489 aa25.83■■□□□ 1.73
LMNA-222ENST00000508500 CLTCQ00610 1675 aaKnown RBP25.8■■□□□ 1.72
LMNA-222ENST00000508500 KANK4Q5T7N3 995 aaPredicted RBP25.8■■□□□ 1.72
LMNA-222ENST00000508500 PTPRTO14522 1441 aa25.8■■□□□ 1.72
LMNA-222ENST00000508500 MAP3K1Q13233 1512 aa25.79■■□□□ 1.72
LMNA-222ENST00000508500 RTEL1-TNFRSF6BF6WH68 1400 aa25.78■■□□□ 1.72
LMNA-222ENST00000508500 NPATQ14207 1427 aa25.77■■□□□ 1.72
LMNA-222ENST00000508500 DMRT2Q9Y5R5 561 aa25.76■■□□□ 1.71
LMNA-222ENST00000508500 CCDC141Q6ZP82 1450 aa25.76■■□□□ 1.71
LMNA-222ENST00000508500 ESF1Q9H501 851 aaKnown RBP25.75■■□□□ 1.71
LMNA-222ENST00000508500 LTBP4Q8N2S1 1624 aa25.74■■□□□ 1.71
LMNA-222ENST00000508500 NCOA1Q15788 1441 aa25.74■■□□□ 1.71
LMNA-222ENST00000508500 ZNF142P52746 1687 aaPredicted RBP25.74■■□□□ 1.71
LMNA-222ENST00000508500 ARHGEF5Q12774 1597 aa25.73■■□□□ 1.71
LMNA-222ENST00000508500 ZMYM3Q14202 1370 aa25.72■■□□□ 1.71
LMNA-222ENST00000508500 GGT6Q6P531 493 aa25.7■■□□□ 1.7
LMNA-222ENST00000508500 DHX29Q7Z478 1369 aaKnown RBP25.69■■□□□ 1.7
LMNA-222ENST00000508500 MYO3AQ8NEV4 1616 aa25.68■■□□□ 1.7
LMNA-222ENST00000508500 CAMSAP1Q5T5Y3 1602 aa25.67■■□□□ 1.7
LMNA-222ENST00000508500 RSPH4AQ5TD94 716 aa25.67■■□□□ 1.7
LMNA-222ENST00000508500 PTPRKQ15262 1439 aa25.64■■□□□ 1.7
LMNA-222ENST00000508500 MYOM3Q5VTT5 1437 aa25.63■■□□□ 1.69
LMNA-222ENST00000508500 MAST1Q9Y2H9 1570 aa25.63■■□□□ 1.69
LMNA-222ENST00000508500 IQSEC2Q5JU85 1478 aa25.61■■□□□ 1.69
LMNA-222ENST00000508500 MIA2Q96PC5 1412 aa25.61■■□□□ 1.69
LMNA-222ENST00000508500 PPP6R1Q9UPN7 881 aa25.6■■□□□ 1.69
LMNA-222ENST00000508500 CEP170BQ9Y4F5 1589 aaPredicted RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms