RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 ZNF219Q9P2Y4 722 aaPredicted RBP10.77□□□□□ -0.69
HMGN1P16-201ENST00000508308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.75□□□□□ -0.69
HMGN1P16-201ENST00000508308 HECW2Q9P2P5 1572 aa10.75□□□□□ -0.69
HMGN1P16-201ENST00000508308 CDK13Q14004 1512 aaKnown RBP10.74□□□□□ -0.69
HMGN1P16-201ENST00000508308 TTC37Q6PGP7 1564 aa10.74□□□□□ -0.69
HMGN1P16-201ENST00000508308 PLEKHD1A6NEE1 506 aa10.74□□□□□ -0.69
HMGN1P16-201ENST00000508308 EHMT2Q96KQ7 1210 aa10.74□□□□□ -0.69
HMGN1P16-201ENST00000508308 ARHGAP35Q9NRY4 1499 aa10.74□□□□□ -0.69
HMGN1P16-201ENST00000508308 HAX1O00165 279 aa10.73□□□□□ -0.69
HMGN1P16-201ENST00000508308 ADAMTSL3P82987 1691 aa10.73□□□□□ -0.69
HMGN1P16-201ENST00000508308 RICTORQ6R327 1708 aa10.72□□□□□ -0.69
HMGN1P16-201ENST00000508308 UBTFP17480 764 aaKnown RBP10.71□□□□□ -0.69
HMGN1P16-201ENST00000508308 AKNAQ7Z591 1439 aa10.71□□□□□ -0.69
HMGN1P16-201ENST00000508308 FANCAO15360 1455 aa10.7□□□□□ -0.7
HMGN1P16-201ENST00000508308 DENND4BO75064 1496 aaPredicted RBP10.69□□□□□ -0.7
HMGN1P16-201ENST00000508308 BCORL1Q5H9F3 1711 aa10.69□□□□□ -0.7
HMGN1P16-201ENST00000508308 SIGLEC1Q9BZZ2 1709 aa10.69□□□□□ -0.7
HMGN1P16-201ENST00000508308 PTPRMP28827 1452 aa10.68□□□□□ -0.7
HMGN1P16-201ENST00000508308 LRRIQ1Q96JM4 1722 aa10.68□□□□□ -0.7
HMGN1P16-201ENST00000508308 ARHGEF40Q8TER5 1519 aa10.68□□□□□ -0.7
HMGN1P16-201ENST00000508308 FMN1Q68DA7 1419 aa10.67□□□□□ -0.7
HMGN1P16-201ENST00000508308 ZMYM4Q5VZL5 1548 aa10.67□□□□□ -0.7
HMGN1P16-201ENST00000508308 PLCH2O75038 1416 aa10.67□□□□□ -0.7
HMGN1P16-201ENST00000508308 YEATS2Q9ULM3 1422 aa10.67□□□□□ -0.7
HMGN1P16-201ENST00000508308 HECW1Q76N89 1606 aa10.66□□□□□ -0.7
HMGN1P16-201ENST00000508308 MADDQ8WXG6 1647 aa10.66□□□□□ -0.7
HMGN1P16-201ENST00000508308 CFAP74Q9C0B2 1584 aa10.66□□□□□ -0.7
HMGN1P16-201ENST00000508308 ILDR1Q86SU0 546 aaPredicted RBP10.66□□□□□ -0.7
HMGN1P16-201ENST00000508308 KIF14Q15058 1648 aa10.66□□□□□ -0.7
HMGN1P16-201ENST00000508308 PIP4P2Q8N4L2 257 aa10.65□□□□□ -0.7
HMGN1P16-201ENST00000508308 APLP2Q06481 763 aa10.64□□□□□ -0.71
HMGN1P16-201ENST00000508308 NCBP3Q53F19 620 aaKnown RBP10.64□□□□□ -0.71
HMGN1P16-201ENST00000508308 ATP1B4Q9UN42 357 aaPredicted RBP10.64□□□□□ -0.71
HMGN1P16-201ENST00000508308 SCAPERQ9BY12 1400 aa10.64□□□□□ -0.71
HMGN1P16-201ENST00000508308 ARID4BQ4LE39 1312 aaPredicted RBP10.63□□□□□ -0.71
HMGN1P16-201ENST00000508308 POGZQ7Z3K3 1410 aa10.63□□□□□ -0.71
HMGN1P16-201ENST00000508308 ZFYVE16Q7Z3T8 1539 aa10.63□□□□□ -0.71
HMGN1P16-201ENST00000508308 MYO5CQ9NQX4 1742 aa10.62□□□□□ -0.71
HMGN1P16-201ENST00000508308 TROQ12816 1431 aaPredicted RBP10.62□□□□□ -0.71
HMGN1P16-201ENST00000508308 MAGI2Q86UL8 1455 aa10.61□□□□□ -0.71
HMGN1P16-201ENST00000508308 RIMS1Q86UR5 1692 aaKnown RBP10.61□□□□□ -0.71
HMGN1P16-201ENST00000508308 LHX8Q68G74 356 aa10.61□□□□□ -0.71
HMGN1P16-201ENST00000508308 EFCAB2Q5VUJ9 269 aa10.6□□□□□ -0.71
HMGN1P16-201ENST00000508308 LMTK3Q96Q04 1460 aa10.6□□□□□ -0.71
HMGN1P16-201ENST00000508308 PCF11O94913 1555 aaKnown RBP10.6□□□□□ -0.71
HMGN1P16-201ENST00000508308 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
HMGN1P16-201ENST00000508308 CDC42BPBQ9Y5S2 1711 aa10.59□□□□□ -0.71
HMGN1P16-201ENST00000508308 CDK11AQ9UQ88 783 aaPredicted RBP10.59□□□□□ -0.71
HMGN1P16-201ENST00000508308 KDM5CP41229 1560 aa10.57□□□□□ -0.72
HMGN1P16-201ENST00000508308 ATP10AO60312 1499 aa10.57□□□□□ -0.72
HMGN1P16-201ENST00000508308 AFAP1Q8N556 730 aa10.57□□□□□ -0.72
HMGN1P16-201ENST00000508308 ARHGAP5Q13017 1502 aa10.57□□□□□ -0.72
HMGN1P16-201ENST00000508308 ARHGEF12Q9NZN5 1544 aa10.57□□□□□ -0.72
HMGN1P16-201ENST00000508308 CLIP1P30622 1438 aa10.56□□□□□ -0.72
HMGN1P16-201ENST00000508308 ZNF518AQ6AHZ1 1483 aa10.55□□□□□ -0.72
HMGN1P16-201ENST00000508308 MLECQ14165 292 aa10.55□□□□□ -0.72
HMGN1P16-201ENST00000508308 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
HMGN1P16-201ENST00000508308 PREX2Q70Z35 1606 aa10.55□□□□□ -0.72
HMGN1P16-201ENST00000508308 FER1L4A9Z1Z3 1794 aa10.54□□□□□ -0.72
HMGN1P16-201ENST00000508308 EVX2Q03828 476 aa10.54□□□□□ -0.72
HMGN1P16-201ENST00000508308 C9orf84Q5VXU9 1444 aa10.54□□□□□ -0.72
HMGN1P16-201ENST00000508308 TRAPPC8Q9Y2L5 1435 aa10.54□□□□□ -0.72
HMGN1P16-201ENST00000508308 FYCO1Q9BQS8 1478 aa10.54□□□□□ -0.72
HMGN1P16-201ENST00000508308 CDC42BPAQ5VT25 1732 aa10.53□□□□□ -0.72
HMGN1P16-201ENST00000508308 DIP2CQ9Y2E4 1556 aa10.53□□□□□ -0.72
HMGN1P16-201ENST00000508308 HSPA2P54652 639 aa10.53□□□□□ -0.72
HMGN1P16-201ENST00000508308 ABCA6Q8N139 1617 aa10.53□□□□□ -0.72
HMGN1P16-201ENST00000508308 ABCC1P33527 1531 aa10.53□□□□□ -0.72
HMGN1P16-201ENST00000508308 MLH3Q9UHC1 1453 aa10.52□□□□□ -0.73
HMGN1P16-201ENST00000508308 ITSN2Q9NZM3 1697 aa10.51□□□□□ -0.73
HMGN1P16-201ENST00000508308 CEBPAP49715 358 aaPredicted RBP10.51□□□□□ -0.73
HMGN1P16-201ENST00000508308 REREQ9P2R6 1566 aa10.51□□□□□ -0.73
HMGN1P16-201ENST00000508308 KIDINS220Q9ULH0 1771 aa10.5□□□□□ -0.73
HMGN1P16-201ENST00000508308 GPATCH8Q9UKJ3 1502 aaKnown RBP10.5□□□□□ -0.73
HMGN1P16-201ENST00000508308 NPM3O75607 178 aaKnown RBP10.5□□□□□ -0.73
HMGN1P16-201ENST00000508308 SAMD9LQ8IVG5 1584 aa10.49□□□□□ -0.73
HMGN1P16-201ENST00000508308 AKT1S1Q96B36 256 aa10.49□□□□□ -0.73
HMGN1P16-201ENST00000508308 AGLP35573 1532 aa10.47□□□□□ -0.73
HMGN1P16-201ENST00000508308 FBXO41Q8TF61 875 aa10.46□□□□□ -0.73
HMGN1P16-201ENST00000508308 SYCP2Q9BX26 1530 aa10.46□□□□□ -0.74
HMGN1P16-201ENST00000508308 PREX1Q8TCU6 1659 aa10.46□□□□□ -0.74
HMGN1P16-201ENST00000508308 HNRNPMP52272 730 aaKnown RBP eCLIP10.45□□□□□ -0.74
HMGN1P16-201ENST00000508308 ZNF777Q9ULD5 760 aaPredicted RBP10.45□□□□□ -0.74
HMGN1P16-201ENST00000508308 SETD1BQ9UPS6 1966 aaKnown RBP10.45□□□□□ -0.74
HMGN1P16-201ENST00000508308 C3P01024 1663 aa10.44□□□□□ -0.74
HMGN1P16-201ENST00000508308 FXR2P51116 673 aaKnown RBP eCLIP10.44□□□□□ -0.74
HMGN1P16-201ENST00000508308 MYT1LQ9UL68 1186 aa10.44□□□□□ -0.74
HMGN1P16-201ENST00000508308 STRCQ7RTU9 1775 aa10.44□□□□□ -0.74
HMGN1P16-201ENST00000508308 CEP162Q5TB80 1403 aa10.42□□□□□ -0.74
HMGN1P16-201ENST00000508308 KIAA1107Q9UPP5 1409 aa10.42□□□□□ -0.74
HMGN1P16-201ENST00000508308 ZNF644Q9H582 1327 aaPredicted RBP10.42□□□□□ -0.74
HMGN1P16-201ENST00000508308 CFDP1Q9UEE9 299 aaPredicted RBP10.42□□□□□ -0.74
HMGN1P16-201ENST00000508308 TIAM1Q13009 1591 aa10.42□□□□□ -0.74
HMGN1P16-201ENST00000508308 INO80Q9ULG1 1556 aaPredicted RBP10.42□□□□□ -0.74
HMGN1P16-201ENST00000508308 CCNB3Q8WWL7 1395 aa10.41□□□□□ -0.74
HMGN1P16-201ENST00000508308 SPAG9O60271 1321 aaKnown RBP10.41□□□□□ -0.74
HMGN1P16-201ENST00000508308 PLXNC1O60486 1568 aa10.41□□□□□ -0.74
HMGN1P16-201ENST00000508308 ATP7AQ04656 1500 aa10.41□□□□□ -0.74
HMGN1P16-201ENST00000508308 MTUS2Q5JR59 1369 aa10.4□□□□□ -0.74
HMGN1P16-201ENST00000508308 SUPT6HQ7KZ85 1726 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms