RNA–Protein interactions for RNA: ENST00000507273.5

RACK1-216, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-216ENST00000507273 LOC105371045A0A1W2PR82 267 aa13.54□□□□□ -0.24
RACK1-216ENST00000507273 ARHGEF40Q8TER5 1519 aa13.54□□□□□ -0.24
RACK1-216ENST00000507273 SIGLEC1Q9BZZ2 1709 aa13.53□□□□□ -0.24
RACK1-216ENST00000507273 POGZQ7Z3K3 1410 aa13.51□□□□□ -0.25
RACK1-216ENST00000507273 ARHGAP5Q13017 1502 aa13.5□□□□□ -0.25
RACK1-216ENST00000507273 SCAPERQ9BY12 1400 aa13.5□□□□□ -0.25
RACK1-216ENST00000507273 ADAMTSL3P82987 1691 aa13.5□□□□□ -0.25
RACK1-216ENST00000507273 YEATS2Q9ULM3 1422 aa13.48□□□□□ -0.25
RACK1-216ENST00000507273 BCORL1Q5H9F3 1711 aa13.48□□□□□ -0.25
RACK1-216ENST00000507273 EFCAB2Q5VUJ9 269 aa13.48□□□□□ -0.25
RACK1-216ENST00000507273 KDM5CP41229 1560 aa13.48□□□□□ -0.25
RACK1-216ENST00000507273 ITSN2Q9NZM3 1697 aa13.47□□□□□ -0.25
RACK1-216ENST00000507273 ABCC1P33527 1531 aa13.47□□□□□ -0.25
RACK1-216ENST00000507273 ZFYVE16Q7Z3T8 1539 aa13.47□□□□□ -0.25
RACK1-216ENST00000507273 ARHGEF12Q9NZN5 1544 aa13.47□□□□□ -0.25
RACK1-216ENST00000507273 MAGI2Q86UL8 1455 aa13.47□□□□□ -0.25
RACK1-216ENST00000507273 GPATCH8Q9UKJ3 1502 aaKnown RBP13.46□□□□□ -0.25
RACK1-216ENST00000507273 SAMD9LQ8IVG5 1584 aa13.45□□□□□ -0.26
RACK1-216ENST00000507273 EHBP1L1Q8N3D4 1523 aa13.44□□□□□ -0.26
RACK1-216ENST00000507273 ZNF518AQ6AHZ1 1483 aa13.43□□□□□ -0.26
RACK1-216ENST00000507273 MADDQ8WXG6 1647 aa13.43□□□□□ -0.26
RACK1-216ENST00000507273 TIAM1Q13009 1591 aa13.43□□□□□ -0.26
RACK1-216ENST00000507273 VPS8Q8N3P4 1428 aa13.43□□□□□ -0.26
RACK1-216ENST00000507273 HECW2Q9P2P5 1572 aa13.42□□□□□ -0.26
RACK1-216ENST00000507273 TRAPPC8Q9Y2L5 1435 aa13.42□□□□□ -0.26
RACK1-216ENST00000507273 AFAP1Q8N556 730 aa13.41□□□□□ -0.26
RACK1-216ENST00000507273 MTUS2Q5JR59 1369 aa13.41□□□□□ -0.26
RACK1-216ENST00000507273 DIP2CQ9Y2E4 1556 aa13.41□□□□□ -0.26
RACK1-216ENST00000507273 KIDINS220Q9ULH0 1771 aa13.4□□□□□ -0.26
RACK1-216ENST00000507273 ABCA6Q8N139 1617 aa13.4□□□□□ -0.26
RACK1-216ENST00000507273 ATP10AO60312 1499 aa13.4□□□□□ -0.26
RACK1-216ENST00000507273 MLH3Q9UHC1 1453 aa13.39□□□□□ -0.27
RACK1-216ENST00000507273 SYCP2Q9BX26 1530 aa13.39□□□□□ -0.27
RACK1-216ENST00000507273 RIMS1Q86UR5 1692 aaKnown RBP13.38□□□□□ -0.27
RACK1-216ENST00000507273 PTPRMP28827 1452 aa13.38□□□□□ -0.27
RACK1-216ENST00000507273 SUPT6HQ7KZ85 1726 aaKnown RBP13.38□□□□□ -0.27
RACK1-216ENST00000507273 C9orf84Q5VXU9 1444 aa13.38□□□□□ -0.27
RACK1-216ENST00000507273 REREQ9P2R6 1566 aa13.37□□□□□ -0.27
RACK1-216ENST00000507273 CCNB3Q8WWL7 1395 aa13.36□□□□□ -0.27
RACK1-216ENST00000507273 FER1L4A9Z1Z3 1794 aa13.36□□□□□ -0.27
RACK1-216ENST00000507273 ARID4BQ4LE39 1312 aaPredicted RBP13.36□□□□□ -0.27
RACK1-216ENST00000507273 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
RACK1-216ENST00000507273 LRRC9Q6ZRR7 1453 aa13.36□□□□□ -0.27
RACK1-216ENST00000507273 MAP3K1Q13233 1512 aa13.35□□□□□ -0.27
RACK1-216ENST00000507273 KIAA1107Q9UPP5 1409 aa13.35□□□□□ -0.27
RACK1-216ENST00000507273 INO80Q9ULG1 1556 aaPredicted RBP13.34□□□□□ -0.27
RACK1-216ENST00000507273 CFDP1Q9UEE9 299 aaPredicted RBP13.33□□□□□ -0.28
RACK1-216ENST00000507273 ZNF777Q9ULD5 760 aaPredicted RBP13.33□□□□□ -0.28
RACK1-216ENST00000507273 PLEKHH2Q8IVE3 1493 aa13.33□□□□□ -0.28
RACK1-216ENST00000507273 MBD5Q9P267 1494 aa13.32□□□□□ -0.28
RACK1-216ENST00000507273 HNRNPMP52272 730 aaKnown RBP eCLIP13.32□□□□□ -0.28
RACK1-216ENST00000507273 ZNF644Q9H582 1327 aaPredicted RBP13.32□□□□□ -0.28
RACK1-216ENST00000507273 AGLP35573 1532 aa13.31□□□□□ -0.28
RACK1-216ENST00000507273 KANK4Q5T7N3 995 aaPredicted RBP13.31□□□□□ -0.28
RACK1-216ENST00000507273 ATP7AQ04656 1500 aa13.3□□□□□ -0.28
RACK1-216ENST00000507273 PLXNC1O60486 1568 aa13.29□□□□□ -0.28
RACK1-216ENST00000507273 MLECQ14165 292 aa13.29□□□□□ -0.28
RACK1-216ENST00000507273 CAMSAP2Q08AD1 1489 aa13.29□□□□□ -0.28
RACK1-216ENST00000507273 SPAG9O60271 1321 aaKnown RBP13.26□□□□□ -0.29
RACK1-216ENST00000507273 ADGBQ8N7X0 1667 aa13.26□□□□□ -0.29
RACK1-216ENST00000507273 ARHGEF5Q12774 1597 aa13.25□□□□□ -0.29
RACK1-216ENST00000507273 LMTK3Q96Q04 1460 aa13.25□□□□□ -0.29
RACK1-216ENST00000507273 MYT1LQ9UL68 1186 aa13.25□□□□□ -0.29
RACK1-216ENST00000507273 C3P01024 1663 aa13.24□□□□□ -0.29
RACK1-216ENST00000507273 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
RACK1-216ENST00000507273 RTEL1-TNFRSF6BF6WH68 1400 aa13.23□□□□□ -0.29
RACK1-216ENST00000507273 A2MP01023 1474 aa13.23□□□□□ -0.29
RACK1-216ENST00000507273 MYOM3Q5VTT5 1437 aa13.22□□□□□ -0.29
RACK1-216ENST00000507273 MROH2AA6NES4 1674 aa13.2□□□□□ -0.3
RACK1-216ENST00000507273 PREX1Q8TCU6 1659 aa13.2□□□□□ -0.3
RACK1-216ENST00000507273 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
RACK1-216ENST00000507273 MAST1Q9Y2H9 1570 aa13.2□□□□□ -0.3
RACK1-216ENST00000507273 CEBPAP49715 358 aaPredicted RBP13.19□□□□□ -0.3
RACK1-216ENST00000507273 CLTCQ00610 1675 aaKnown RBP13.18□□□□□ -0.3
RACK1-216ENST00000507273 SETD1BQ9UPS6 1966 aaKnown RBP13.18□□□□□ -0.3
RACK1-216ENST00000507273 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
RACK1-216ENST00000507273 RSPH4AQ5TD94 716 aa13.17□□□□□ -0.3
RACK1-216ENST00000507273 PTPN23Q9H3S7 1636 aa13.17□□□□□ -0.3
RACK1-216ENST00000507273 CROCC2H7BZ55 1655 aa13.16□□□□□ -0.3
RACK1-216ENST00000507273 DHX29Q7Z478 1369 aaKnown RBP13.16□□□□□ -0.3
RACK1-216ENST00000507273 CNTLNQ9NXG0 1405 aa13.15□□□□□ -0.3
RACK1-216ENST00000507273 TCOF1Q13428 1488 aaKnown RBP13.15□□□□□ -0.3
RACK1-216ENST00000507273 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
RACK1-216ENST00000507273 HSPA2P54652 639 aa13.13□□□□□ -0.31
RACK1-216ENST00000507273 APLP2Q06481 763 aa13.13□□□□□ -0.31
RACK1-216ENST00000507273 DNMT1P26358 1616 aaKnown RBP13.12□□□□□ -0.31
RACK1-216ENST00000507273 ABCC5O15440 1437 aa13.12□□□□□ -0.31
RACK1-216ENST00000507273 STRCQ7RTU9 1775 aa13.12□□□□□ -0.31
RACK1-216ENST00000507273 ZMYM3Q14202 1370 aa13.11□□□□□ -0.31
RACK1-216ENST00000507273 RNF17Q9BXT8 1623 aaKnown RBP13.11□□□□□ -0.31
RACK1-216ENST00000507273 SHANK2Q9UPX8 1470 aa13.1□□□□□ -0.31
RACK1-216ENST00000507273 GGT6Q6P531 493 aa13.1□□□□□ -0.31
RACK1-216ENST00000507273 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
RACK1-216ENST00000507273 EIF2AK4Q9P2K8 1649 aaKnown RBP13.1□□□□□ -0.31
RACK1-216ENST00000507273 TSPY4P0CV99 314 aa13.09□□□□□ -0.31
RACK1-216ENST00000507273 TSPY10P0CW01 314 aa13.09□□□□□ -0.31
RACK1-216ENST00000507273 NPATQ14207 1427 aa13.09□□□□□ -0.31
RACK1-216ENST00000507273 DAPK1P53355 1430 aa13.08□□□□□ -0.32
RACK1-216ENST00000507273 PTPRKQ15262 1439 aa13.08□□□□□ -0.32
RACK1-216ENST00000507273 UHRF1BP1Q6BDS2 1440 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms