RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 MS4A4AQ96JQ5 239 aa10.37□□□□□ -0.75
SMARCAD1-205ENST00000506089 LSM11P83369 360 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMARCAD1-205ENST00000506089 ZNF316A6NFI3 1004 aaPredicted RBP10.32□□□□□ -0.76
SMARCAD1-205ENST00000506089 PHF8Q9UPP1 1060 aa10.3□□□□□ -0.76
SMARCAD1-205ENST00000506089 SOX12O15370 315 aa10.29□□□□□ -0.76
SMARCAD1-205ENST00000506089 PLA2G2EQ9NZK7 142 aa10.26□□□□□ -0.77
SMARCAD1-205ENST00000506089 PKD2Q13563 968 aa10.25□□□□□ -0.77
SMARCAD1-205ENST00000506089 TRIM41Q8WV44 630 aa10.25□□□□□ -0.77
SMARCAD1-205ENST00000506089 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.24□□□□□ -0.77
SMARCAD1-205ENST00000506089 ZFP91Q96JP5 570 aaPredicted RBP10.24□□□□□ -0.77
SMARCAD1-205ENST00000506089 POTEEQ6S8J3 1075 aa10.23□□□□□ -0.77
SMARCAD1-205ENST00000506089 RNF25Q96BH1 459 aaPredicted RBP10.23□□□□□ -0.77
SMARCAD1-205ENST00000506089 AXIN2Q9Y2T1 843 aa10.23□□□□□ -0.77
SMARCAD1-205ENST00000506089 RIOK3O14730 519 aaKnown RBP10.21□□□□□ -0.77
SMARCAD1-205ENST00000506089 NUDT7P0C024 238 aa10.21□□□□□ -0.77
SMARCAD1-205ENST00000506089 PBX2P40425 430 aa10.2□□□□□ -0.78
SMARCAD1-205ENST00000506089 HCSTQ9UBK5 93 aa10.18□□□□□ -0.78
SMARCAD1-205ENST00000506089 LHX6Q9UPM6 363 aa10.17□□□□□ -0.78
SMARCAD1-205ENST00000506089 VGFO15240 615 aaPredicted RBP10.16□□□□□ -0.78
SMARCAD1-205ENST00000506089 ECM2O94769 699 aaPredicted RBP10.15□□□□□ -0.78
SMARCAD1-205ENST00000506089 FBXO22Q8NEZ5 403 aa10.15□□□□□ -0.78
SMARCAD1-205ENST00000506089 C2orf72A6NCS6 295 aa10.14□□□□□ -0.79
SMARCAD1-205ENST00000506089 KIF3CO14782 793 aa10.14□□□□□ -0.79
SMARCAD1-205ENST00000506089 NLRP6P59044 892 aa10.14□□□□□ -0.79
SMARCAD1-205ENST00000506089 RGL2O15211 777 aa10.11□□□□□ -0.79
SMARCAD1-205ENST00000506089 ADGRD1Q6QNK2 874 aa10.11□□□□□ -0.79
SMARCAD1-205ENST00000506089 PCDHGA4Q9Y5G9 962 aa10.11□□□□□ -0.79
SMARCAD1-205ENST00000506089 MFRPQ9BY79 579 aa10.07□□□□□ -0.8
SMARCAD1-205ENST00000506089 BCL11BQ9C0K0 894 aaPredicted RBP10.07□□□□□ -0.8
SMARCAD1-205ENST00000506089 SLC34A2O95436 690 aa10.06□□□□□ -0.8
SMARCAD1-205ENST00000506089 ARHGAP33O14559 1287 aa10.05□□□□□ -0.8
SMARCAD1-205ENST00000506089 HRO43593 1189 aa10.02□□□□□ -0.81
SMARCAD1-205ENST00000506089 DMRTA1Q5VZB9 504 aa10.02□□□□□ -0.81
SMARCAD1-205ENST00000506089 RTN4Q9NQC3 1192 aaKnown RBP10.02□□□□□ -0.81
SMARCAD1-205ENST00000506089 STK24Q9Y6E0 443 aa10.02□□□□□ -0.81
SMARCAD1-205ENST00000506089 PSEN2P49810 448 aa10.01□□□□□ -0.81
SMARCAD1-205ENST00000506089 KCTD12Q96CX2 325 aaKnown RBP10.01□□□□□ -0.81
SMARCAD1-205ENST00000506089 TK2O00142 265 aa9.99□□□□□ -0.81
SMARCAD1-205ENST00000506089 TMC2Q8TDI7 906 aa9.99□□□□□ -0.81
SMARCAD1-205ENST00000506089 KDM4FA0A1W2PPD8 638 aa9.96□□□□□ -0.82
SMARCAD1-205ENST00000506089 PSDA5PKW4 1024 aaPredicted RBP9.96□□□□□ -0.82
SMARCAD1-205ENST00000506089 AMER1Q5JTC6 1135 aaPredicted RBP9.95□□□□□ -0.82
SMARCAD1-205ENST00000506089 STK25O00506 426 aa9.94□□□□□ -0.82
SMARCAD1-205ENST00000506089 TAOK2Q9UL54 1235 aa9.91□□□□□ -0.82
SMARCAD1-205ENST00000506089 PTPN5P54829 565 aa9.89□□□□□ -0.83
SMARCAD1-205ENST00000506089 STAC3Q96MF2 364 aa9.89□□□□□ -0.83
SMARCAD1-205ENST00000506089 PPP4R3BQ5MIZ7 849 aa9.88□□□□□ -0.83
SMARCAD1-205ENST00000506089 PTCD2Q8WV60 388 aaKnown RBP9.88□□□□□ -0.83
SMARCAD1-205ENST00000506089 KCNK17Q96T54 332 aa9.88□□□□□ -0.83
SMARCAD1-205ENST00000506089 PPP1R37O75864 691 aa9.87□□□□□ -0.83
SMARCAD1-205ENST00000506089 IRX2Q9BZI1 471 aaPredicted RBP9.87□□□□□ -0.83
SMARCAD1-205ENST00000506089 HS6ST3Q8IZP7 471 aa9.85□□□□□ -0.83
SMARCAD1-205ENST00000506089 RGS20O76081 388 aa9.84□□□□□ -0.83
SMARCAD1-205ENST00000506089 CHGAP10645 457 aaKnown RBP9.84□□□□□ -0.83
SMARCAD1-205ENST00000506089 VPS9D1Q9Y2B5 631 aa9.83□□□□□ -0.84
SMARCAD1-205ENST00000506089 PLPP6Q8IY26 295 aa9.82□□□□□ -0.84
SMARCAD1-205ENST00000506089 A0A0G2JS52 829 aa9.81□□□□□ -0.84
SMARCAD1-205ENST00000506089 DCAF8L2P0C7V8 631 aa9.81□□□□□ -0.84
SMARCAD1-205ENST00000506089 IFFO2Q5TF58 517 aa9.81□□□□□ -0.84
SMARCAD1-205ENST00000506089 KCNH8Q96L42 1107 aa9.8□□□□□ -0.84
SMARCAD1-205ENST00000506089 FOXK1P85037 733 aa9.79□□□□□ -0.84
SMARCAD1-205ENST00000506089 NKX1-1Q15270 411 aaPredicted RBP9.78□□□□□ -0.84
SMARCAD1-205ENST00000506089 THSD4Q6ZMP0 1018 aa9.78□□□□□ -0.84
SMARCAD1-205ENST00000506089 DSG2Q14126 1118 aa9.76□□□□□ -0.85
SMARCAD1-205ENST00000506089 DNAJC5Q9H3Z4 198 aa9.76□□□□□ -0.85
SMARCAD1-205ENST00000506089 TBC1D12O60347 775 aa9.74□□□□□ -0.85
SMARCAD1-205ENST00000506089 BHMG1C9JSJ3 638 aaPredicted RBP9.73□□□□□ -0.85
SMARCAD1-205ENST00000506089 ZNF454Q8N9F8 522 aa9.73□□□□□ -0.85
SMARCAD1-205ENST00000506089 GPHNQ9NQX3 736 aaPredicted RBP9.73□□□□□ -0.85
SMARCAD1-205ENST00000506089 WNT2BQ93097 391 aa9.72□□□□□ -0.85
SMARCAD1-205ENST00000506089 BCL2L12Q9HB09 334 aa9.72□□□□□ -0.85
SMARCAD1-205ENST00000506089 SLC4A5Q9BY07 1137 aa9.71□□□□□ -0.86
SMARCAD1-205ENST00000506089 GOLGA8CPA6NN73 597 aa9.7□□□□□ -0.86
SMARCAD1-205ENST00000506089 UPF1Q92900 1129 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMARCAD1-205ENST00000506089 MRPL50Q8N5N7 158 aaKnown RBP9.68□□□□□ -0.86
SMARCAD1-205ENST00000506089 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
SMARCAD1-205ENST00000506089 ZBED2Q9BTP6 218 aa9.68□□□□□ -0.86
SMARCAD1-205ENST00000506089 Q6ZNB5 142 aa9.66□□□□□ -0.86
SMARCAD1-205ENST00000506089 PTPREP23469 700 aa9.65□□□□□ -0.86
SMARCAD1-205ENST00000506089 FOSBP53539 338 aa9.65□□□□□ -0.86
SMARCAD1-205ENST00000506089 GTPBP6O43824 516 aaPredicted RBP9.64□□□□□ -0.87
SMARCAD1-205ENST00000506089 NBPF3Q9H094 633 aa9.61□□□□□ -0.87
SMARCAD1-205ENST00000506089 BBXQ8WY36 941 aaPredicted RBP9.6□□□□□ -0.87
SMARCAD1-205ENST00000506089 ITGBL1O95965 494 aaPredicted RBP9.59□□□□□ -0.87
SMARCAD1-205ENST00000506089 ADAM33Q9BZ11 813 aa9.59□□□□□ -0.87
SMARCAD1-205ENST00000506089 JPH4Q96JJ6 628 aa9.57□□□□□ -0.88
SMARCAD1-205ENST00000506089 BCAMP50895 628 aa9.55□□□□□ -0.88
SMARCAD1-205ENST00000506089 ZDHHC16Q969W1 377 aa9.55□□□□□ -0.88
SMARCAD1-205ENST00000506089 LCE2BO14633 110 aa9.54□□□□□ -0.88
SMARCAD1-205ENST00000506089 ANKK1Q8NFD2 765 aa9.54□□□□□ -0.88
SMARCAD1-205ENST00000506089 PPP1R15BQ5SWA1 713 aa9.53□□□□□ -0.88
SMARCAD1-205ENST00000506089 CRISPLD2Q9H0B8 497 aa9.53□□□□□ -0.88
SMARCAD1-205ENST00000506089 ANO8Q9HCE9 1232 aaPredicted RBP9.53□□□□□ -0.88
SMARCAD1-205ENST00000506089 PROX2Q3B8N5 592 aa9.52□□□□□ -0.89
SMARCAD1-205ENST00000506089 EVI5O60447 810 aa9.51□□□□□ -0.89
SMARCAD1-205ENST00000506089 RYDENQ9NUL5 291 aaKnown RBP9.51□□□□□ -0.89
SMARCAD1-205ENST00000506089 RABGEF1Q9UJ41 708 aa9.5□□□□□ -0.89
SMARCAD1-205ENST00000506089 SOWAHBA6NEL2 793 aa9.48□□□□□ -0.89
SMARCAD1-205ENST00000506089 PPP1R3GB7ZBB8 358 aa9.48□□□□□ -0.89
SMARCAD1-205ENST00000506089 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms