RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 FYCO1Q9BQS8 1478 aa16.82■□□□□ 0.28
NR1I3-222ENST00000506018 EFCAB2Q5VUJ9 269 aa16.82■□□□□ 0.28
NR1I3-222ENST00000506018 ARHGEF40Q8TER5 1519 aa16.82■□□□□ 0.28
NR1I3-222ENST00000506018 ARID4BQ4LE39 1312 aaPredicted RBP16.81■□□□□ 0.28
NR1I3-222ENST00000506018 ZMYM4Q5VZL5 1548 aa16.81■□□□□ 0.28
NR1I3-222ENST00000506018 MAGI2Q86UL8 1455 aa16.79■□□□□ 0.28
NR1I3-222ENST00000506018 ARHGAP5Q13017 1502 aa16.79■□□□□ 0.28
NR1I3-222ENST00000506018 SCAPERQ9BY12 1400 aa16.78■□□□□ 0.28
NR1I3-222ENST00000506018 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
NR1I3-222ENST00000506018 ZFYVE16Q7Z3T8 1539 aa16.78■□□□□ 0.28
NR1I3-222ENST00000506018 BCORL1Q5H9F3 1711 aa16.77■□□□□ 0.28
NR1I3-222ENST00000506018 ADAMTSL3P82987 1691 aa16.77■□□□□ 0.28
NR1I3-222ENST00000506018 POGZQ7Z3K3 1410 aa16.77■□□□□ 0.27
NR1I3-222ENST00000506018 CDC42BPBQ9Y5S2 1711 aa16.75■□□□□ 0.27
NR1I3-222ENST00000506018 PREX2Q70Z35 1606 aa16.75■□□□□ 0.27
NR1I3-222ENST00000506018 ZNF518AQ6AHZ1 1483 aa16.74■□□□□ 0.27
NR1I3-222ENST00000506018 HECW2Q9P2P5 1572 aa16.72■□□□□ 0.27
NR1I3-222ENST00000506018 CDC42BPAQ5VT25 1732 aa16.71■□□□□ 0.27
NR1I3-222ENST00000506018 MADDQ8WXG6 1647 aa16.7■□□□□ 0.26
NR1I3-222ENST00000506018 PTPRMP28827 1452 aa16.7■□□□□ 0.26
NR1I3-222ENST00000506018 YEATS2Q9ULM3 1422 aa16.7■□□□□ 0.26
NR1I3-222ENST00000506018 MYT1LQ9UL68 1186 aa16.7■□□□□ 0.26
NR1I3-222ENST00000506018 CEP162Q5TB80 1403 aa16.68■□□□□ 0.26
NR1I3-222ENST00000506018 ATP10AO60312 1499 aa16.68■□□□□ 0.26
NR1I3-222ENST00000506018 RIMS1Q86UR5 1692 aaKnown RBP16.68■□□□□ 0.26
NR1I3-222ENST00000506018 KDM5CP41229 1560 aa16.67■□□□□ 0.26
NR1I3-222ENST00000506018 C9orf84Q5VXU9 1444 aa16.67■□□□□ 0.26
NR1I3-222ENST00000506018 ITSN2Q9NZM3 1697 aa16.66■□□□□ 0.26
NR1I3-222ENST00000506018 MTUS2Q5JR59 1369 aa16.66■□□□□ 0.26
NR1I3-222ENST00000506018 ABCC1P33527 1531 aa16.65■□□□□ 0.26
NR1I3-222ENST00000506018 FER1L4A9Z1Z3 1794 aa16.65■□□□□ 0.26
NR1I3-222ENST00000506018 AFAP1Q8N556 730 aa16.64■□□□□ 0.25
NR1I3-222ENST00000506018 SIGLEC1Q9BZZ2 1709 aa16.62■□□□□ 0.25
NR1I3-222ENST00000506018 MLECQ14165 292 aa16.62■□□□□ 0.25
NR1I3-222ENST00000506018 ZNF777Q9ULD5 760 aaPredicted RBP16.62■□□□□ 0.25
NR1I3-222ENST00000506018 MLH3Q9UHC1 1453 aa16.62■□□□□ 0.25
NR1I3-222ENST00000506018 EHBP1L1Q8N3D4 1523 aa16.61■□□□□ 0.25
NR1I3-222ENST00000506018 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
NR1I3-222ENST00000506018 PLEKHH2Q8IVE3 1493 aa16.6■□□□□ 0.25
NR1I3-222ENST00000506018 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
NR1I3-222ENST00000506018 REREQ9P2R6 1566 aa16.59■□□□□ 0.25
NR1I3-222ENST00000506018 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
NR1I3-222ENST00000506018 CFDP1Q9UEE9 299 aaPredicted RBP16.59■□□□□ 0.25
NR1I3-222ENST00000506018 SAMD9LQ8IVG5 1584 aa16.58■□□□□ 0.25
NR1I3-222ENST00000506018 TRAPPC8Q9Y2L5 1435 aa16.58■□□□□ 0.24
NR1I3-222ENST00000506018 ARHGEF12Q9NZN5 1544 aa16.58■□□□□ 0.24
NR1I3-222ENST00000506018 ABCA6Q8N139 1617 aa16.57■□□□□ 0.24
NR1I3-222ENST00000506018 SYCP2Q9BX26 1530 aa16.56■□□□□ 0.24
NR1I3-222ENST00000506018 KIDINS220Q9ULH0 1771 aa16.56■□□□□ 0.24
NR1I3-222ENST00000506018 SUPT6HQ7KZ85 1726 aaKnown RBP16.55■□□□□ 0.24
NR1I3-222ENST00000506018 KIAA1107Q9UPP5 1409 aa16.54■□□□□ 0.24
NR1I3-222ENST00000506018 ESF1Q9H501 851 aaKnown RBP16.53■□□□□ 0.24
NR1I3-222ENST00000506018 TIAM1Q13009 1591 aa16.53■□□□□ 0.24
NR1I3-222ENST00000506018 AGLP35573 1532 aa16.53■□□□□ 0.24
NR1I3-222ENST00000506018 SPAG9O60271 1321 aaKnown RBP16.53■□□□□ 0.24
NR1I3-222ENST00000506018 LOC105371045A0A1W2PR82 267 aa16.52■□□□□ 0.24
NR1I3-222ENST00000506018 VPS8Q8N3P4 1428 aa16.52■□□□□ 0.23
NR1I3-222ENST00000506018 HNRNPMP52272 730 aaKnown RBP eCLIP16.51■□□□□ 0.23
NR1I3-222ENST00000506018 LMTK3Q96Q04 1460 aa16.5■□□□□ 0.23
NR1I3-222ENST00000506018 SETD1BQ9UPS6 1966 aaKnown RBP16.5■□□□□ 0.23
NR1I3-222ENST00000506018 ATP7AQ04656 1500 aa16.5■□□□□ 0.23
NR1I3-222ENST00000506018 PREX1Q8TCU6 1659 aa16.48■□□□□ 0.23
NR1I3-222ENST00000506018 INO80Q9ULG1 1556 aaPredicted RBP16.48■□□□□ 0.23
NR1I3-222ENST00000506018 NCOA2Q15596 1464 aa16.46■□□□□ 0.23
NR1I3-222ENST00000506018 ADGBQ8N7X0 1667 aa16.46■□□□□ 0.23
NR1I3-222ENST00000506018 CNTLNQ9NXG0 1405 aa16.45■□□□□ 0.22
NR1I3-222ENST00000506018 MSH5O43196 834 aa16.44■□□□□ 0.22
NR1I3-222ENST00000506018 C3P01024 1663 aa16.44■□□□□ 0.22
NR1I3-222ENST00000506018 MAP3K1Q13233 1512 aa16.44■□□□□ 0.22
NR1I3-222ENST00000506018 LRRC9Q6ZRR7 1453 aa16.43■□□□□ 0.22
NR1I3-222ENST00000506018 RSPH4AQ5TD94 716 aa16.43■□□□□ 0.22
NR1I3-222ENST00000506018 A2MP01023 1474 aa16.42■□□□□ 0.22
NR1I3-222ENST00000506018 APLP2Q06481 763 aa16.42■□□□□ 0.22
NR1I3-222ENST00000506018 CEBPAP49715 358 aaPredicted RBP16.41■□□□□ 0.22
NR1I3-222ENST00000506018 RTEL1-TNFRSF6BF6WH68 1400 aa16.41■□□□□ 0.22
NR1I3-222ENST00000506018 UHRF1BP1Q6BDS2 1440 aa16.41■□□□□ 0.22
NR1I3-222ENST00000506018 MROH2AA6NES4 1674 aa16.41■□□□□ 0.22
NR1I3-222ENST00000506018 PLXNC1O60486 1568 aa16.41■□□□□ 0.22
NR1I3-222ENST00000506018 ZNF644Q9H582 1327 aaPredicted RBP16.41■□□□□ 0.22
NR1I3-222ENST00000506018 CAMSAP2Q08AD1 1489 aa16.41■□□□□ 0.22
NR1I3-222ENST00000506018 CCDC141Q6ZP82 1450 aa16.4■□□□□ 0.22
NR1I3-222ENST00000506018 MBD5Q9P267 1494 aa16.4■□□□□ 0.22
NR1I3-222ENST00000506018 HSPA2P54652 639 aa16.39■□□□□ 0.21
NR1I3-222ENST00000506018 ARHGEF5Q12774 1597 aa16.36■□□□□ 0.21
NR1I3-222ENST00000506018 CLTCQ00610 1675 aaKnown RBP16.36■□□□□ 0.21
NR1I3-222ENST00000506018 TSPY4P0CV99 314 aa16.36■□□□□ 0.21
NR1I3-222ENST00000506018 TSPY10P0CW01 314 aa16.36■□□□□ 0.21
NR1I3-222ENST00000506018 ILDR1Q86SU0 546 aaPredicted RBP16.36■□□□□ 0.21
NR1I3-222ENST00000506018 GGT6Q6P531 493 aa16.35■□□□□ 0.21
NR1I3-222ENST00000506018 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.2
NR1I3-222ENST00000506018 ZMYM3Q14202 1370 aa16.33■□□□□ 0.2
NR1I3-222ENST00000506018 DHX29Q7Z478 1369 aaKnown RBP16.33■□□□□ 0.2
NR1I3-222ENST00000506018 NPATQ14207 1427 aa16.33■□□□□ 0.2
NR1I3-222ENST00000506018 MYOM3Q5VTT5 1437 aa16.32■□□□□ 0.2
NR1I3-222ENST00000506018 MIA2Q96PC5 1412 aa16.32■□□□□ 0.2
NR1I3-222ENST00000506018 KANK4Q5T7N3 995 aaPredicted RBP16.31■□□□□ 0.2
NR1I3-222ENST00000506018 FAM135AQ9P2D6 1515 aa16.29■□□□□ 0.2
NR1I3-222ENST00000506018 MAST1Q9Y2H9 1570 aa16.28■□□□□ 0.2
NR1I3-222ENST00000506018 KIF3BO15066 747 aa16.27■□□□□ 0.2
NR1I3-222ENST00000506018 STRCQ7RTU9 1775 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms