RNA–Protein interactions for RNA: ENST00000505072.5

ATP2C1-209, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 556 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-209ENST00000505072 PREX1Q8TCU6 1659 aa20.57■□□□□ 0.88
ATP2C1-209ENST00000505072 ARHGEF12Q9NZN5 1544 aa20.57■□□□□ 0.88
ATP2C1-209ENST00000505072 DMRT2Q9Y5R5 561 aa20.56■□□□□ 0.88
ATP2C1-209ENST00000505072 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
ATP2C1-209ENST00000505072 SCAPERQ9BY12 1400 aa20.53■□□□□ 0.88
ATP2C1-209ENST00000505072 ATP10AO60312 1499 aa20.53■□□□□ 0.88
ATP2C1-209ENST00000505072 STRCQ7RTU9 1775 aa20.51■□□□□ 0.87
ATP2C1-209ENST00000505072 PLCH2O75038 1416 aa20.51■□□□□ 0.87
ATP2C1-209ENST00000505072 C9orf84Q5VXU9 1444 aa20.51■□□□□ 0.87
ATP2C1-209ENST00000505072 CEBPAP49715 358 aaPredicted RBP20.5■□□□□ 0.87
ATP2C1-209ENST00000505072 RANGAP1P46060 587 aaPredicted RBP20.49■□□□□ 0.87
ATP2C1-209ENST00000505072 SPATA31D1Q6ZQQ2 1576 aa20.47■□□□□ 0.87
ATP2C1-209ENST00000505072 UHRF1BP1Q6BDS2 1440 aa20.47■□□□□ 0.87
ATP2C1-209ENST00000505072 SETD1BQ9UPS6 1966 aaKnown RBP20.46■□□□□ 0.87
ATP2C1-209ENST00000505072 PTPRTO14522 1441 aa20.44■□□□□ 0.86
ATP2C1-209ENST00000505072 CDK13Q14004 1512 aaKnown RBP20.43■□□□□ 0.86
ATP2C1-209ENST00000505072 EFCAB2Q5VUJ9 269 aa20.42■□□□□ 0.86
ATP2C1-209ENST00000505072 ZNF518AQ6AHZ1 1483 aa20.39■□□□□ 0.85
ATP2C1-209ENST00000505072 MYO5CQ9NQX4 1742 aa20.37■□□□□ 0.85
ATP2C1-209ENST00000505072 IQSEC2Q5JU85 1478 aa20.37■□□□□ 0.85
ATP2C1-209ENST00000505072 EEA1Q15075 1411 aa20.36■□□□□ 0.85
ATP2C1-209ENST00000505072 LTBP4Q8N2S1 1624 aa20.36■□□□□ 0.85
ATP2C1-209ENST00000505072 KDM5CP41229 1560 aa20.36■□□□□ 0.85
ATP2C1-209ENST00000505072 REREQ9P2R6 1566 aa20.34■□□□□ 0.85
ATP2C1-209ENST00000505072 AFAP1Q8N556 730 aa20.33■□□□□ 0.85
ATP2C1-209ENST00000505072 DIP2CQ9Y2E4 1556 aa20.33■□□□□ 0.84
ATP2C1-209ENST00000505072 C3P01024 1663 aa20.32■□□□□ 0.84
ATP2C1-209ENST00000505072 TRAPPC8Q9Y2L5 1435 aa20.3■□□□□ 0.84
ATP2C1-209ENST00000505072 CDK11AQ9UQ88 783 aaPredicted RBP20.3■□□□□ 0.84
ATP2C1-209ENST00000505072 NCOA1Q15788 1441 aa20.29■□□□□ 0.84
ATP2C1-209ENST00000505072 ARHGAP5Q13017 1502 aa20.29■□□□□ 0.84
ATP2C1-209ENST00000505072 MYT1LQ9UL68 1186 aa20.29■□□□□ 0.84
ATP2C1-209ENST00000505072 ESF1Q9H501 851 aaKnown RBP20.28■□□□□ 0.84
ATP2C1-209ENST00000505072 MLH3Q9UHC1 1453 aa20.28■□□□□ 0.84
ATP2C1-209ENST00000505072 AGLP35573 1532 aa20.27■□□□□ 0.84
ATP2C1-209ENST00000505072 KIF14Q15058 1648 aa20.27■□□□□ 0.84
ATP2C1-209ENST00000505072 ABCA6Q8N139 1617 aa20.27■□□□□ 0.83
ATP2C1-209ENST00000505072 ATP1B4Q9UN42 357 aaPredicted RBP20.26■□□□□ 0.83
ATP2C1-209ENST00000505072 FMN1Q68DA7 1419 aa20.26■□□□□ 0.83
ATP2C1-209ENST00000505072 TROQ12816 1431 aaPredicted RBP20.25■□□□□ 0.83
ATP2C1-209ENST00000505072 CNTLNQ9NXG0 1405 aa20.23■□□□□ 0.83
ATP2C1-209ENST00000505072 CLIP1P30622 1438 aa20.21■□□□□ 0.83
ATP2C1-209ENST00000505072 CAMSAP1Q5T5Y3 1602 aa20.19■□□□□ 0.82
ATP2C1-209ENST00000505072 NPATQ14207 1427 aa20.19■□□□□ 0.82
ATP2C1-209ENST00000505072 CDC42BPBQ9Y5S2 1711 aa20.18■□□□□ 0.82
ATP2C1-209ENST00000505072 UBAP1LF5GYI3 381 aa20.17■□□□□ 0.82
ATP2C1-209ENST00000505072 ABCC1P33527 1531 aa20.17■□□□□ 0.82
ATP2C1-209ENST00000505072 ZNF335Q9H4Z2 1342 aaPredicted RBP20.15■□□□□ 0.82
ATP2C1-209ENST00000505072 ARHGAP35Q9NRY4 1499 aa20.15■□□□□ 0.82
ATP2C1-209ENST00000505072 KIDINS220Q9ULH0 1771 aa20.14■□□□□ 0.81
ATP2C1-209ENST00000505072 MROH2AA6NES4 1674 aa20.14■□□□□ 0.81
ATP2C1-209ENST00000505072 ITSN2Q9NZM3 1697 aa20.13■□□□□ 0.81
ATP2C1-209ENST00000505072 PREX2Q70Z35 1606 aa20.13■□□□□ 0.81
ATP2C1-209ENST00000505072 NCKAP5LQ9HCH0 1330 aa20.13■□□□□ 0.81
ATP2C1-209ENST00000505072 ZMYM3Q14202 1370 aa20.11■□□□□ 0.81
ATP2C1-209ENST00000505072 PKD2Q13563 968 aa20.1■□□□□ 0.81
ATP2C1-209ENST00000505072 PLA2R1Q13018 1463 aa20.1■□□□□ 0.81
ATP2C1-209ENST00000505072 LRRIQ1Q96JM4 1722 aa20.09■□□□□ 0.81
ATP2C1-209ENST00000505072 UBTFP17480 764 aaKnown RBP20.08■□□□□ 0.81
ATP2C1-209ENST00000505072 ZNF142P52746 1687 aaPredicted RBP20.07■□□□□ 0.8
ATP2C1-209ENST00000505072 TCOF1Q13428 1488 aaKnown RBP20.06■□□□□ 0.8
ATP2C1-209ENST00000505072 SAMD9LQ8IVG5 1584 aa20.05■□□□□ 0.8
ATP2C1-209ENST00000505072 MYO3AQ8NEV4 1616 aa20.05■□□□□ 0.8
ATP2C1-209ENST00000505072 CEP170BQ9Y4F5 1589 aaPredicted RBP20.03■□□□□ 0.8
ATP2C1-209ENST00000505072 PTPRKQ15262 1439 aa20.02■□□□□ 0.8
ATP2C1-209ENST00000505072 CDC42BPAQ5VT25 1732 aa20.02■□□□□ 0.79
ATP2C1-209ENST00000505072 CCDC18Q5T9S5 1454 aa20.01■□□□□ 0.79
ATP2C1-209ENST00000505072 EHMT2Q96KQ7 1210 aa20.01■□□□□ 0.79
ATP2C1-209ENST00000505072 PPP6R1Q9UPN7 881 aa20.01■□□□□ 0.79
ATP2C1-209ENST00000505072 SPAG9O60271 1321 aaKnown RBP20.01■□□□□ 0.79
ATP2C1-209ENST00000505072 CLTCQ00610 1675 aaKnown RBP20■□□□□ 0.79
ATP2C1-209ENST00000505072 MED1Q15648 1581 aaPredicted RBP20■□□□□ 0.79
ATP2C1-209ENST00000505072 SUPT6HQ7KZ85 1726 aaKnown RBP20■□□□□ 0.79
ATP2C1-209ENST00000505072 HSPA1LP34931 641 aa19.99■□□□□ 0.79
ATP2C1-209ENST00000505072 PLXNC1O60486 1568 aa19.98■□□□□ 0.79
ATP2C1-209ENST00000505072 SYCP2Q9BX26 1530 aa19.97■□□□□ 0.79
ATP2C1-209ENST00000505072 CASKIN1Q8WXD9 1431 aa19.97■□□□□ 0.79
ATP2C1-209ENST00000505072 ZNF777Q9ULD5 760 aaPredicted RBP19.97■□□□□ 0.79
ATP2C1-209ENST00000505072 SCAF1Q9H7N4 1312 aaKnown RBP19.96■□□□□ 0.79
ATP2C1-209ENST00000505072 ATP7AQ04656 1500 aa19.96■□□□□ 0.79
ATP2C1-209ENST00000505072 A2MP01023 1474 aa19.95■□□□□ 0.78
ATP2C1-209ENST00000505072 TOM1O60784 492 aa19.95■□□□□ 0.78
ATP2C1-209ENST00000505072 HNRNPMP52272 730 aaKnown RBP eCLIP19.94■□□□□ 0.782e-6■■■■□ 22.4
ATP2C1-209ENST00000505072 PIP4K2BP78356 416 aa19.94■□□□□ 0.78
ATP2C1-209ENST00000505072 A2ML1A8K2U0 1454 aa19.93■□□□□ 0.78
ATP2C1-209ENST00000505072 CPS1P31327 1500 aa19.93■□□□□ 0.78
ATP2C1-209ENST00000505072 INO80Q9ULG1 1556 aaPredicted RBP19.93■□□□□ 0.78
ATP2C1-209ENST00000505072 GGT6Q6P531 493 aa19.93■□□□□ 0.78
ATP2C1-209ENST00000505072 KIAA1107Q9UPP5 1409 aa19.93■□□□□ 0.78
ATP2C1-209ENST00000505072 GPATCH8Q9UKJ3 1502 aaKnown RBP19.92■□□□□ 0.78
ATP2C1-209ENST00000505072 DNMT1P26358 1616 aaKnown RBP19.91■□□□□ 0.78
ATP2C1-209ENST00000505072 PLEKHH2Q8IVE3 1493 aa19.9■□□□□ 0.78
ATP2C1-209ENST00000505072 SHANK2Q9UPX8 1470 aa19.88■□□□□ 0.77
ATP2C1-209ENST00000505072 NEURL4Q96JN8 1562 aa19.87■□□□□ 0.77
ATP2C1-209ENST00000505072 POLR1AO95602 1720 aaPredicted RBP19.86■□□□□ 0.77
ATP2C1-209ENST00000505072 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
ATP2C1-209ENST00000505072 FYCO1Q9BQS8 1478 aa19.86■□□□□ 0.77
ATP2C1-209ENST00000505072 CFDP1Q9UEE9 299 aaPredicted RBP19.85■□□□□ 0.77
ATP2C1-209ENST00000505072 ADGBQ8N7X0 1667 aa19.84■□□□□ 0.77
ATP2C1-209ENST00000505072 TNRQ92752 1358 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms