RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 YEATS2Q9ULM3 1422 aa36.91■■■■□ 3.5
CDC42SE2-207ENST00000504701 CCDC18Q5T9S5 1454 aa36.88■■■■□ 3.49
CDC42SE2-207ENST00000504701 POGZQ7Z3K3 1410 aa36.87■■■■□ 3.49
CDC42SE2-207ENST00000504701 ZFYVE16Q7Z3T8 1539 aa36.86■■■■□ 3.49
CDC42SE2-207ENST00000504701 ARID4BQ4LE39 1312 aaPredicted RBP36.85■■■■□ 3.49
CDC42SE2-207ENST00000504701 FYCO1Q9BQS8 1478 aa36.85■■■■□ 3.49
CDC42SE2-207ENST00000504701 CDC42BPBQ9Y5S2 1711 aa36.85■■■■□ 3.49
CDC42SE2-207ENST00000504701 MADDQ8WXG6 1647 aa36.85■■■■□ 3.49
CDC42SE2-207ENST00000504701 ARHGAP5Q13017 1502 aa36.85■■■■□ 3.49
CDC42SE2-207ENST00000504701 EFCAB2Q5VUJ9 269 aa36.82■■■■□ 3.48
CDC42SE2-207ENST00000504701 PTPRMP28827 1452 aa36.81■■■■□ 3.48
CDC42SE2-207ENST00000504701 PREX2Q70Z35 1606 aa36.76■■■■□ 3.48
CDC42SE2-207ENST00000504701 MAGI2Q86UL8 1455 aa36.74■■■■□ 3.47
CDC42SE2-207ENST00000504701 RIMS1Q86UR5 1692 aaKnown RBP36.73■■■■□ 3.47
CDC42SE2-207ENST00000504701 CDC42BPAQ5VT25 1732 aa36.72■■■■□ 3.47
CDC42SE2-207ENST00000504701 AFAP1Q8N556 730 aa36.68■■■■□ 3.46
CDC42SE2-207ENST00000504701 KDM5CP41229 1560 aa36.66■■■■□ 3.46
CDC42SE2-207ENST00000504701 ARHGEF12Q9NZN5 1544 aa36.66■■■■□ 3.46
CDC42SE2-207ENST00000504701 ZNF518AQ6AHZ1 1483 aa36.65■■■■□ 3.46
CDC42SE2-207ENST00000504701 CEP162Q5TB80 1403 aa36.64■■■■□ 3.46
CDC42SE2-207ENST00000504701 ABCC1P33527 1531 aa36.64■■■■□ 3.46
CDC42SE2-207ENST00000504701 MLECQ14165 292 aa36.62■■■■□ 3.45
CDC42SE2-207ENST00000504701 ITSN2Q9NZM3 1697 aa36.61■■■■□ 3.45
CDC42SE2-207ENST00000504701 ATP10AO60312 1499 aa36.61■■■■□ 3.45
CDC42SE2-207ENST00000504701 TRAPPC8Q9Y2L5 1435 aa36.59■■■■□ 3.45
CDC42SE2-207ENST00000504701 C9orf84Q5VXU9 1444 aa36.58■■■■□ 3.45
CDC42SE2-207ENST00000504701 DIP2CQ9Y2E4 1556 aa36.56■■■■□ 3.44
CDC42SE2-207ENST00000504701 FER1L4A9Z1Z3 1794 aa36.55■■■■□ 3.44
CDC42SE2-207ENST00000504701 PLPPR3Q6T4P5 718 aa36.55■■■■□ 3.44
CDC42SE2-207ENST00000504701 ABCA6Q8N139 1617 aa36.55■■■■□ 3.44
CDC42SE2-207ENST00000504701 SAMD9LQ8IVG5 1584 aa36.54■■■■□ 3.44
CDC42SE2-207ENST00000504701 GPATCH8Q9UKJ3 1502 aaKnown RBP36.53■■■■□ 3.44
CDC42SE2-207ENST00000504701 LOC105371045A0A1W2PR82 267 aa36.51■■■■□ 3.44
CDC42SE2-207ENST00000504701 MYT1LQ9UL68 1186 aa36.5■■■■□ 3.43
CDC42SE2-207ENST00000504701 ZNF777Q9ULD5 760 aaPredicted RBP36.49■■■■□ 3.43
CDC42SE2-207ENST00000504701 SYCP2Q9BX26 1530 aa36.46■■■■□ 3.43
CDC42SE2-207ENST00000504701 MLH3Q9UHC1 1453 aa36.46■■■■□ 3.43
CDC42SE2-207ENST00000504701 MTUS2Q5JR59 1369 aa36.46■■■■□ 3.43
CDC42SE2-207ENST00000504701 KIDINS220Q9ULH0 1771 aa36.45■■■■□ 3.43
CDC42SE2-207ENST00000504701 LMTK3Q96Q04 1460 aa36.44■■■■□ 3.42
CDC42SE2-207ENST00000504701 TIAM1Q13009 1591 aa36.39■■■■□ 3.42
CDC42SE2-207ENST00000504701 REREQ9P2R6 1566 aa36.38■■■■□ 3.41
CDC42SE2-207ENST00000504701 EHBP1L1Q8N3D4 1523 aa36.38■■■■□ 3.41
CDC42SE2-207ENST00000504701 CCNB3Q8WWL7 1395 aa36.38■■■■□ 3.41
CDC42SE2-207ENST00000504701 HNRNPMP52272 730 aaKnown RBP eCLIP36.37■■■■□ 3.419e-6■■■■□ 19.4
CDC42SE2-207ENST00000504701 CFDP1Q9UEE9 299 aaPredicted RBP36.34■■■■□ 3.41
CDC42SE2-207ENST00000504701 CEBPAP49715 358 aaPredicted RBP36.3■■■■□ 3.4
CDC42SE2-207ENST00000504701 ZNF644Q9H582 1327 aaPredicted RBP36.29■■■■□ 3.4
CDC42SE2-207ENST00000504701 HSPA2P54652 639 aa36.28■■■■□ 3.4
CDC42SE2-207ENST00000504701 AGLP35573 1532 aa36.26■■■■□ 3.4
CDC42SE2-207ENST00000504701 ILDR1Q86SU0 546 aaPredicted RBP36.25■■■■□ 3.39
CDC42SE2-207ENST00000504701 KIAA1107Q9UPP5 1409 aa36.25■■■■□ 3.39
CDC42SE2-207ENST00000504701 INO80Q9ULG1 1556 aaPredicted RBP36.23■■■■□ 3.39
CDC42SE2-207ENST00000504701 SPAG9O60271 1321 aaKnown RBP36.23■■■■□ 3.39
CDC42SE2-207ENST00000504701 ATP7AQ04656 1500 aa36.23■■■■□ 3.39
CDC42SE2-207ENST00000504701 PLEKHH2Q8IVE3 1493 aa36.22■■■■□ 3.39
CDC42SE2-207ENST00000504701 VPS8Q8N3P4 1428 aa36.2■■■■□ 3.39
CDC42SE2-207ENST00000504701 SUPT6HQ7KZ85 1726 aaKnown RBP36.2■■■■□ 3.38
CDC42SE2-207ENST00000504701 NCOA2Q15596 1464 aa36.19■■■■□ 3.38
CDC42SE2-207ENST00000504701 C3P01024 1663 aa36.17■■■■□ 3.38
CDC42SE2-207ENST00000504701 MBD5Q9P267 1494 aa36.15■■■■□ 3.38
CDC42SE2-207ENST00000504701 PREX1Q8TCU6 1659 aa36.15■■■■□ 3.38
CDC42SE2-207ENST00000504701 PLXNC1O60486 1568 aa36.1■■■■□ 3.37
CDC42SE2-207ENST00000504701 A2MP01023 1474 aa36.07■■■■□ 3.37
CDC42SE2-207ENST00000504701 LRRC9Q6ZRR7 1453 aa36.07■■■■□ 3.37
CDC42SE2-207ENST00000504701 CAMSAP2Q08AD1 1489 aa36.05■■■■□ 3.36
CDC42SE2-207ENST00000504701 KANK4Q5T7N3 995 aaPredicted RBP36.02■■■■□ 3.36
CDC42SE2-207ENST00000504701 ADGBQ8N7X0 1667 aa36.02■■■■□ 3.36
CDC42SE2-207ENST00000504701 ESF1Q9H501 851 aaKnown RBP36■■■■□ 3.35
CDC42SE2-207ENST00000504701 CLTCQ00610 1675 aaKnown RBP35.98■■■■□ 3.35
CDC42SE2-207ENST00000504701 UHRF1BP1Q6BDS2 1440 aa35.97■■■■□ 3.35
CDC42SE2-207ENST00000504701 SETD1BQ9UPS6 1966 aaKnown RBP35.96■■■■□ 3.35
CDC42SE2-207ENST00000504701 MROH2AA6NES4 1674 aa35.95■■■■□ 3.35
CDC42SE2-207ENST00000504701 CCDC141Q6ZP82 1450 aa35.95■■■■□ 3.35
CDC42SE2-207ENST00000504701 CNTLNQ9NXG0 1405 aa35.95■■■■□ 3.35
CDC42SE2-207ENST00000504701 STRCQ7RTU9 1775 aa35.93■■■■□ 3.34
CDC42SE2-207ENST00000504701 MAP3K1Q13233 1512 aa35.92■■■■□ 3.34
CDC42SE2-207ENST00000504701 RTEL1-TNFRSF6BF6WH68 1400 aa35.91■■■■□ 3.34
CDC42SE2-207ENST00000504701 GGT6Q6P531 493 aa35.91■■■■□ 3.34
CDC42SE2-207ENST00000504701 ZMYM3Q14202 1370 aa35.89■■■■□ 3.34
CDC42SE2-207ENST00000504701 ARHGEF5Q12774 1597 aa35.87■■■■□ 3.33
CDC42SE2-207ENST00000504701 DHX29Q7Z478 1369 aaKnown RBP35.83■■■■□ 3.33
CDC42SE2-207ENST00000504701 MYOM3Q5VTT5 1437 aa35.78■■■■□ 3.32
CDC42SE2-207ENST00000504701 NPATQ14207 1427 aa35.77■■■■□ 3.32
CDC42SE2-207ENST00000504701 FBXO41Q8TF61 875 aa35.76■■■■□ 3.32
CDC42SE2-207ENST00000504701 PTPRKQ15262 1439 aa35.74■■■■□ 3.31
CDC42SE2-207ENST00000504701 KIF3BO15066 747 aa35.74■■■■□ 3.31
CDC42SE2-207ENST00000504701 RSPH4AQ5TD94 716 aa35.74■■■■□ 3.31
CDC42SE2-207ENST00000504701 MYO3AQ8NEV4 1616 aa35.73■■■■□ 3.31
CDC42SE2-207ENST00000504701 MAST1Q9Y2H9 1570 aa35.7■■■■□ 3.31
CDC42SE2-207ENST00000504701 MIA2Q96PC5 1412 aa35.69■■■■□ 3.3
CDC42SE2-207ENST00000504701 TSPY4P0CV99 314 aa35.68■■■■□ 3.3
CDC42SE2-207ENST00000504701 TSPY10P0CW01 314 aa35.68■■■■□ 3.3
CDC42SE2-207ENST00000504701 CAMSAP1Q5T5Y3 1602 aa35.67■■■■□ 3.3
CDC42SE2-207ENST00000504701 NCOA1Q15788 1441 aa35.66■■■■□ 3.3
CDC42SE2-207ENST00000504701 ZNF142P52746 1687 aaPredicted RBP35.65■■■■□ 3.3
CDC42SE2-207ENST00000504701 PPP6R1Q9UPN7 881 aa35.64■■■■□ 3.3
CDC42SE2-207ENST00000504701 KDM5DQ9BY66 1539 aa35.62■■■■□ 3.29
CDC42SE2-207ENST00000504701 CEP170BQ9Y4F5 1589 aaPredicted RBP35.62■■■■□ 3.29
CDC42SE2-207ENST00000504701 PTPN23Q9H3S7 1636 aa35.61■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms