RNA–Protein interactions for RNA: ENST00000503114.1

TRIM41-203, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 1,904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-203ENST00000503114 NUP160Q12769 1436 aa26.98■■□□□ 1.91
TRIM41-203ENST00000503114 TRIM52Q96A61 297 aa26.96■■□□□ 1.91
TRIM41-203ENST00000503114 MPHOSPH9Q99550 1183 aa26.96■■□□□ 1.91
TRIM41-203ENST00000503114 SUPT16HQ9Y5B9 1047 aaKnown RBP26.94■■□□□ 1.9
TRIM41-203ENST00000503114 ADGBQ8N7X0 1667 aa26.94■■□□□ 1.9
TRIM41-203ENST00000503114 PLB1Q6P1J6 1458 aa26.93■■□□□ 1.9
TRIM41-203ENST00000503114 ANP32CO43423 234 aa26.92■■□□□ 1.9
TRIM41-203ENST00000503114 CHMP7Q8WUX9 453 aaPredicted RBP26.92■■□□□ 1.9
TRIM41-203ENST00000503114 CROCC2H7BZ55 1655 aa26.91■■□□□ 1.9
TRIM41-203ENST00000503114 PRG4Q92954 1404 aaPredicted RBP26.91■■□□□ 1.9
TRIM41-203ENST00000503114 CAMSAP2Q08AD1 1489 aa26.9■■□□□ 1.9
TRIM41-203ENST00000503114 KIF14Q15058 1648 aa26.9■■□□□ 1.9
TRIM41-203ENST00000503114 CARMIL2Q6F5E8 1435 aa26.89■■□□□ 1.9
TRIM41-203ENST00000503114 ZNF644Q9H582 1327 aaPredicted RBP26.88■■□□□ 1.89
TRIM41-203ENST00000503114 ANKRD30BQ9BXX2 1392 aa26.87■■□□□ 1.89
TRIM41-203ENST00000503114 RPRD2Q5VT52 1461 aaKnown RBP26.87■■□□□ 1.89
TRIM41-203ENST00000503114 GPATCH8Q9UKJ3 1502 aaKnown RBP26.87■■□□□ 1.89
TRIM41-203ENST00000503114 ABCA8O94911 1581 aa26.84■■□□□ 1.89
TRIM41-203ENST00000503114 ADGRL2O95490 1459 aa26.83■■□□□ 1.89
TRIM41-203ENST00000503114 TEX14Q8IWB6 1497 aa26.82■■□□□ 1.88
TRIM41-203ENST00000503114 JPH4Q96JJ6 628 aa26.8■■□□□ 1.88
TRIM41-203ENST00000503114 CDC42BPAQ5VT25 1732 aa26.79■■□□□ 1.88
TRIM41-203ENST00000503114 NCOA1Q15788 1441 aa26.79■■□□□ 1.88
TRIM41-203ENST00000503114 HSPA5P11021 654 aaKnown RBP26.78■■□□□ 1.88
TRIM41-203ENST00000503114 L3MBTL2Q969R5 705 aa26.78■■□□□ 1.88
TRIM41-203ENST00000503114 PZPP20742 1482 aa26.78■■□□□ 1.88
TRIM41-203ENST00000503114 CFDP1Q9UEE9 299 aaPredicted RBP26.77■■□□□ 1.88
TRIM41-203ENST00000503114 FOXD1Q16676 465 aa26.76■■□□□ 1.87
TRIM41-203ENST00000503114 EIF4G2P78344 907 aaKnown RBP eCLIP26.75■■□□□ 1.87
TRIM41-203ENST00000503114 WASHC2AQ641Q2 1341 aa26.74■■□□□ 1.87
TRIM41-203ENST00000503114 POLR1AO95602 1720 aaPredicted RBP26.73■■□□□ 1.87
TRIM41-203ENST00000503114 FBLN2P98095 1184 aa26.73■■□□□ 1.87
TRIM41-203ENST00000503114 ABCC10Q5T3U5 1492 aa26.73■■□□□ 1.87
TRIM41-203ENST00000503114 SLC4A1APQ9BWU0 796 aaKnown RBP26.7■■□□□ 1.86
TRIM41-203ENST00000503114 ATP10BO94823 1461 aa26.69■■□□□ 1.86
TRIM41-203ENST00000503114 SHANK2Q9UPX8 1470 aa26.69■■□□□ 1.86
TRIM41-203ENST00000503114 CNTLNQ9NXG0 1405 aa26.66■■□□□ 1.86
TRIM41-203ENST00000503114 ANKRD30AQ9BXX3 1397 aa26.65■■□□□ 1.86
TRIM41-203ENST00000503114 MBD5Q9P267 1494 aa26.64■■□□□ 1.86
TRIM41-203ENST00000503114 KIAA1107Q9UPP5 1409 aa26.64■■□□□ 1.85
TRIM41-203ENST00000503114 NBPF8Q3BBV2 869 aa26.63■■□□□ 1.85
TRIM41-203ENST00000503114 SPATA31E1Q6ZUB1 1445 aa26.63■■□□□ 1.85
TRIM41-203ENST00000503114 CCDC7Q96M83 1385 aa26.61■■□□□ 1.85
TRIM41-203ENST00000503114 PLEKHD1A6NEE1 506 aa26.61■■□□□ 1.85
TRIM41-203ENST00000503114 ZNF777Q9ULD5 760 aaPredicted RBP26.59■■□□□ 1.85
TRIM41-203ENST00000503114 ANKRD50Q9ULJ7 1429 aa26.58■■□□□ 1.85
TRIM41-203ENST00000503114 ARHGEF5Q12774 1597 aa26.58■■□□□ 1.85
TRIM41-203ENST00000503114 KDM5DQ9BY66 1539 aa26.58■■□□□ 1.85
TRIM41-203ENST00000503114 C9orf84Q5VXU9 1444 aa26.57■■□□□ 1.84
TRIM41-203ENST00000503114 CHD1O14646 1710 aa26.56■■□□□ 1.84
TRIM41-203ENST00000503114 C11orf95C9JLR9 678 aaPredicted RBP26.54■■□□□ 1.84
TRIM41-203ENST00000503114 PREX2Q70Z35 1606 aa26.52■■□□□ 1.84
TRIM41-203ENST00000503114 CDC42BPBQ9Y5S2 1711 aa26.51■■□□□ 1.83
TRIM41-203ENST00000503114 FKBP8Q14318 412 aa26.5■■□□□ 1.83
TRIM41-203ENST00000503114 SHROOM2Q13796 1616 aa26.5■■□□□ 1.83
TRIM41-203ENST00000503114 PTPRGP23470 1445 aa26.5■■□□□ 1.83
TRIM41-203ENST00000503114 PKD2Q13563 968 aa26.47■■□□□ 1.83
TRIM41-203ENST00000503114 SAMD9LQ8IVG5 1584 aa26.47■■□□□ 1.83
TRIM41-203ENST00000503114 KIF7Q2M1P5 1343 aa26.45■■□□□ 1.82
TRIM41-203ENST00000503114 KDM5CP41229 1560 aa26.44■■□□□ 1.82
TRIM41-203ENST00000503114 UHRF1BP1Q6BDS2 1440 aa26.44■■□□□ 1.82
TRIM41-203ENST00000503114 ARHGEF12Q9NZN5 1544 aa26.44■■□□□ 1.82
TRIM41-203ENST00000503114 NEFLP07196 543 aa26.43■■□□□ 1.82
TRIM41-203ENST00000503114 PRKRIP1Q9H875 184 aaPredicted RBP26.42■■□□□ 1.82
TRIM41-203ENST00000503114 CCDC141Q6ZP82 1450 aa26.42■■□□□ 1.82
TRIM41-203ENST00000503114 BCORL1Q5H9F3 1711 aa26.42■■□□□ 1.82
TRIM41-203ENST00000503114 NUP155O75694 1391 aa26.42■■□□□ 1.82
TRIM41-203ENST00000503114 KIF15Q9NS87 1388 aa26.4■■□□□ 1.82
TRIM41-203ENST00000503114 TSPY4P0CV99 314 aa26.39■■□□□ 1.82
TRIM41-203ENST00000503114 TSPY10P0CW01 314 aa26.39■■□□□ 1.82
TRIM41-203ENST00000503114 HNRNPUQ00839 825 aaKnown RBP eCLIP26.39■■□□□ 1.82
TRIM41-203ENST00000503114 TSHZ2Q9NRE2 1034 aa26.39■■□□□ 1.82
TRIM41-203ENST00000503114 RALGAPBQ86X10 1494 aa26.38■■□□□ 1.81
TRIM41-203ENST00000503114 MAST1Q9Y2H9 1570 aa26.37■■□□□ 1.81
TRIM41-203ENST00000503114 BCANQ96GW7 911 aa26.37■■□□□ 1.81
TRIM41-203ENST00000503114 USP47Q96K76 1375 aa26.37■■□□□ 1.81
TRIM41-203ENST00000503114 TTC37Q6PGP7 1564 aa26.35■■□□□ 1.81
TRIM41-203ENST00000503114 HNRNPMP52272 730 aaKnown RBP eCLIP26.34■■□□□ 1.81
TRIM41-203ENST00000503114 CCDC184Q52MB2 194 aa26.33■■□□□ 1.81
TRIM41-203ENST00000503114 RSPH4AQ5TD94 716 aa26.32■■□□□ 1.8
TRIM41-203ENST00000503114 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.31■■□□□ 1.8
TRIM41-203ENST00000503114 MYO5CQ9NQX4 1742 aa26.31■■□□□ 1.8
TRIM41-203ENST00000503114 UNC13BO14795 1591 aa26.3■■□□□ 1.8
TRIM41-203ENST00000503114 ABCC2Q92887 1545 aa26.3■■□□□ 1.8
TRIM41-203ENST00000503114 FAM135AQ9P2D6 1515 aa26.3■■□□□ 1.8
TRIM41-203ENST00000503114 ARID4BQ4LE39 1312 aaPredicted RBP26.3■■□□□ 1.8
TRIM41-203ENST00000503114 SYCP2Q9BX26 1530 aa26.3■■□□□ 1.8
TRIM41-203ENST00000503114 DHX29Q7Z478 1369 aaKnown RBP26.29■■□□□ 1.8
TRIM41-203ENST00000503114 PLXNC1O60486 1568 aa26.27■■□□□ 1.8
TRIM41-203ENST00000503114 ARHGAP5Q13017 1502 aa26.26■■□□□ 1.79
TRIM41-203ENST00000503114 ERCC6L2Q5T890 1561 aa26.25■■□□□ 1.79
TRIM41-203ENST00000503114 MRS2Q9HD23 443 aa26.24■■□□□ 1.79
TRIM41-203ENST00000503114 ZNF326Q5BKZ1 582 aaKnown RBP26.23■■□□□ 1.79
TRIM41-203ENST00000503114 PLEKHH2Q8IVE3 1493 aa26.22■■□□□ 1.79
TRIM41-203ENST00000503114 CLASP1Q7Z460 1538 aa26.21■■□□□ 1.79
TRIM41-203ENST00000503114 IQGAP3Q86VI3 1631 aa26.2■■□□□ 1.78
TRIM41-203ENST00000503114 ZBED9Q6R2W3 1325 aa26.19■■□□□ 1.78
TRIM41-203ENST00000503114 ROCK2O75116 1388 aaKnown RBP26.19■■□□□ 1.78
TRIM41-203ENST00000503114 MYT1Q01538 1121 aa26.18■■□□□ 1.78
TRIM41-203ENST00000503114 TRPM1Q7Z4N2 1603 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms