RNA–Protein interactions for RNA: ENST00000503002.5

RPS3A-202, Transcript of ribosomal protein S3A, humanhuman

TSL 3

Gene RPS3A, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-202ENST00000503002 CDC42BPBQ9Y5S2 1711 aa22.81■■□□□ 1.24
RPS3A-202ENST00000503002 MAGI2Q86UL8 1455 aa22.79■■□□□ 1.24
RPS3A-202ENST00000503002 KDM5CP41229 1560 aa22.79■■□□□ 1.24
RPS3A-202ENST00000503002 ZFYVE16Q7Z3T8 1539 aa22.77■■□□□ 1.24
RPS3A-202ENST00000503002 CDK11AQ9UQ88 783 aaPredicted RBP22.76■■□□□ 1.23
RPS3A-202ENST00000503002 CDC42BPAQ5VT25 1732 aa22.75■■□□□ 1.23
RPS3A-202ENST00000503002 YEATS2Q9ULM3 1422 aa22.74■■□□□ 1.23
RPS3A-202ENST00000503002 SCAPERQ9BY12 1400 aa22.74■■□□□ 1.23
RPS3A-202ENST00000503002 ABCC1P33527 1531 aa22.73■■□□□ 1.23
RPS3A-202ENST00000503002 MADDQ8WXG6 1647 aa22.72■■□□□ 1.23
RPS3A-202ENST00000503002 ARHGAP5Q13017 1502 aa22.72■■□□□ 1.23
RPS3A-202ENST00000503002 HECW2Q9P2P5 1572 aa22.71■■□□□ 1.23
RPS3A-202ENST00000503002 CEP162Q5TB80 1403 aa22.7■■□□□ 1.22
RPS3A-202ENST00000503002 ZNF518AQ6AHZ1 1483 aa22.7■■□□□ 1.22
RPS3A-202ENST00000503002 ITSN2Q9NZM3 1697 aa22.7■■□□□ 1.22
RPS3A-202ENST00000503002 PTPRMP28827 1452 aa22.68■■□□□ 1.22
RPS3A-202ENST00000503002 ATP1B4Q9UN42 357 aaPredicted RBP22.68■■□□□ 1.22
RPS3A-202ENST00000503002 ARHGEF12Q9NZN5 1544 aa22.67■■□□□ 1.22
RPS3A-202ENST00000503002 REREQ9P2R6 1566 aa22.66■■□□□ 1.22
RPS3A-202ENST00000503002 EFCAB2Q5VUJ9 269 aa22.65■■□□□ 1.22
RPS3A-202ENST00000503002 DIP2CQ9Y2E4 1556 aa22.64■■□□□ 1.22
RPS3A-202ENST00000503002 SAMD9LQ8IVG5 1584 aa22.63■■□□□ 1.21
RPS3A-202ENST00000503002 ABCA6Q8N139 1617 aa22.62■■□□□ 1.21
RPS3A-202ENST00000503002 GPATCH8Q9UKJ3 1502 aaKnown RBP22.62■■□□□ 1.21
RPS3A-202ENST00000503002 RIMS1Q86UR5 1692 aaKnown RBP22.62■■□□□ 1.21
RPS3A-202ENST00000503002 MLH3Q9UHC1 1453 aa22.61■■□□□ 1.21
RPS3A-202ENST00000503002 C9orf84Q5VXU9 1444 aa22.61■■□□□ 1.21
RPS3A-202ENST00000503002 EHBP1L1Q8N3D4 1523 aa22.61■■□□□ 1.21
RPS3A-202ENST00000503002 ATP10AO60312 1499 aa22.6■■□□□ 1.21
RPS3A-202ENST00000503002 TIAM1Q13009 1591 aa22.58■■□□□ 1.2
RPS3A-202ENST00000503002 TRAPPC8Q9Y2L5 1435 aa22.57■■□□□ 1.2
RPS3A-202ENST00000503002 KIDINS220Q9ULH0 1771 aa22.57■■□□□ 1.2
RPS3A-202ENST00000503002 FER1L4A9Z1Z3 1794 aa22.56■■□□□ 1.2
RPS3A-202ENST00000503002 SYCP2Q9BX26 1530 aa22.54■■□□□ 1.2
RPS3A-202ENST00000503002 AGLP35573 1532 aa22.53■■□□□ 1.2
RPS3A-202ENST00000503002 INO80Q9ULG1 1556 aaPredicted RBP22.52■■□□□ 1.2
RPS3A-202ENST00000503002 KIAA1107Q9UPP5 1409 aa22.5■■□□□ 1.19
RPS3A-202ENST00000503002 LMTK3Q96Q04 1460 aa22.5■■□□□ 1.19
RPS3A-202ENST00000503002 AFAP1Q8N556 730 aa22.5■■□□□ 1.19
RPS3A-202ENST00000503002 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
RPS3A-202ENST00000503002 MTUS2Q5JR59 1369 aa22.48■■□□□ 1.19
RPS3A-202ENST00000503002 PLEKHH2Q8IVE3 1493 aa22.47■■□□□ 1.19
RPS3A-202ENST00000503002 ARID4BQ4LE39 1312 aaPredicted RBP22.47■■□□□ 1.19
RPS3A-202ENST00000503002 PLXNC1O60486 1568 aa22.46■■□□□ 1.19
RPS3A-202ENST00000503002 SUPT6HQ7KZ85 1726 aaKnown RBP22.44■■□□□ 1.18
RPS3A-202ENST00000503002 CCNB3Q8WWL7 1395 aa22.43■■□□□ 1.18
RPS3A-202ENST00000503002 ATP7AQ04656 1500 aa22.42■■□□□ 1.18
RPS3A-202ENST00000503002 MAP3K1Q13233 1512 aa22.42■■□□□ 1.18
RPS3A-202ENST00000503002 MBD5Q9P267 1494 aa22.42■■□□□ 1.18
RPS3A-202ENST00000503002 NCOA2Q15596 1464 aa22.41■■□□□ 1.18
RPS3A-202ENST00000503002 LOC105371045A0A1W2PR82 267 aa22.37■■□□□ 1.17
RPS3A-202ENST00000503002 LRRC9Q6ZRR7 1453 aa22.36■■□□□ 1.17
RPS3A-202ENST00000503002 PREX1Q8TCU6 1659 aa22.36■■□□□ 1.17
RPS3A-202ENST00000503002 C3P01024 1663 aa22.34■■□□□ 1.17
RPS3A-202ENST00000503002 CFDP1Q9UEE9 299 aaPredicted RBP22.34■■□□□ 1.17
RPS3A-202ENST00000503002 ADGBQ8N7X0 1667 aa22.33■■□□□ 1.17
RPS3A-202ENST00000503002 MROH2AA6NES4 1674 aa22.33■■□□□ 1.16
RPS3A-202ENST00000503002 CAMSAP2Q08AD1 1489 aa22.32■■□□□ 1.16
RPS3A-202ENST00000503002 ARHGEF5Q12774 1597 aa22.31■■□□□ 1.16
RPS3A-202ENST00000503002 RTEL1-TNFRSF6BF6WH68 1400 aa22.3■■□□□ 1.16
RPS3A-202ENST00000503002 HNRNPMP52272 730 aaKnown RBP eCLIP22.29■■□□□ 1.163e-8■■■□□ 16.8
RPS3A-202ENST00000503002 MLECQ14165 292 aa22.29■■□□□ 1.16
RPS3A-202ENST00000503002 SPAG9O60271 1321 aaKnown RBP22.29■■□□□ 1.16
RPS3A-202ENST00000503002 ZNF644Q9H582 1327 aaPredicted RBP22.29■■□□□ 1.16
RPS3A-202ENST00000503002 A2MP01023 1474 aa22.28■■□□□ 1.16
RPS3A-202ENST00000503002 ZNF777Q9ULD5 760 aaPredicted RBP22.28■■□□□ 1.16
RPS3A-202ENST00000503002 CCDC141Q6ZP82 1450 aa22.28■■□□□ 1.16
RPS3A-202ENST00000503002 CNTLNQ9NXG0 1405 aa22.26■■□□□ 1.15
RPS3A-202ENST00000503002 MAST1Q9Y2H9 1570 aa22.23■■□□□ 1.15
RPS3A-202ENST00000503002 SETD1BQ9UPS6 1966 aaKnown RBP22.22■■□□□ 1.15
RPS3A-202ENST00000503002 CLTCQ00610 1675 aaKnown RBP22.19■■□□□ 1.14
RPS3A-202ENST00000503002 FAM135AQ9P2D6 1515 aa22.18■■□□□ 1.14
RPS3A-202ENST00000503002 MYOM3Q5VTT5 1437 aa22.18■■□□□ 1.14
RPS3A-202ENST00000503002 MIA2Q96PC5 1412 aa22.18■■□□□ 1.14
RPS3A-202ENST00000503002 NPATQ14207 1427 aa22.17■■□□□ 1.14
RPS3A-202ENST00000503002 CEBPAP49715 358 aaPredicted RBP22.17■■□□□ 1.14
RPS3A-202ENST00000503002 KANK4Q5T7N3 995 aaPredicted RBP22.17■■□□□ 1.14
RPS3A-202ENST00000503002 MYT1LQ9UL68 1186 aa22.17■■□□□ 1.14
RPS3A-202ENST00000503002 STRCQ7RTU9 1775 aa22.17■■□□□ 1.14
RPS3A-202ENST00000503002 ZNF142P52746 1687 aaPredicted RBP22.15■■□□□ 1.14
RPS3A-202ENST00000503002 UHRF1BP1Q6BDS2 1440 aa22.14■■□□□ 1.14
RPS3A-202ENST00000503002 DHX29Q7Z478 1369 aaKnown RBP22.14■■□□□ 1.14
RPS3A-202ENST00000503002 HSPA2P54652 639 aa22.13■■□□□ 1.13
RPS3A-202ENST00000503002 CROCC2H7BZ55 1655 aa22.13■■□□□ 1.13
RPS3A-202ENST00000503002 RNF17Q9BXT8 1623 aaKnown RBP22.12■■□□□ 1.13
RPS3A-202ENST00000503002 MYO3AQ8NEV4 1616 aa22.11■■□□□ 1.13
RPS3A-202ENST00000503002 RSPH4AQ5TD94 716 aa22.1■■□□□ 1.13
RPS3A-202ENST00000503002 EIF2AK4Q9P2K8 1649 aaKnown RBP22.09■■□□□ 1.13
RPS3A-202ENST00000503002 PTPRKQ15262 1439 aa22.09■■□□□ 1.13
RPS3A-202ENST00000503002 KDM5DQ9BY66 1539 aa22.08■■□□□ 1.13
RPS3A-202ENST00000503002 ZMYM3Q14202 1370 aa22.08■■□□□ 1.12
RPS3A-202ENST00000503002 TCOF1Q13428 1488 aaKnown RBP22.08■■□□□ 1.12
RPS3A-202ENST00000503002 SHANK2Q9UPX8 1470 aa22.08■■□□□ 1.12
RPS3A-202ENST00000503002 MROH1Q8NDA8 1641 aa22.07■■□□□ 1.12
RPS3A-202ENST00000503002 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
RPS3A-202ENST00000503002 PTPN23Q9H3S7 1636 aa22.06■■□□□ 1.12
RPS3A-202ENST00000503002 PPP6R1Q9UPN7 881 aa22.06■■□□□ 1.12
RPS3A-202ENST00000503002 ILDR1Q86SU0 546 aaPredicted RBP22.05■■□□□ 1.12
RPS3A-202ENST00000503002 DNMT1P26358 1616 aaKnown RBP22.04■■□□□ 1.12
RPS3A-202ENST00000503002 NCOA1Q15788 1441 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms