RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 ZMYM4Q5VZL5 1548 aa23.01■■□□□ 1.27
CLDND1-206ENST00000502299 CFAP74Q9C0B2 1584 aa23■■□□□ 1.27
CLDND1-206ENST00000502299 RIMS1Q86UR5 1692 aaKnown RBP23■■□□□ 1.27
CLDND1-206ENST00000502299 SIGLEC1Q9BZZ2 1709 aa22.99■■□□□ 1.27
CLDND1-206ENST00000502299 ZFYVE16Q7Z3T8 1539 aa22.98■■□□□ 1.27
CLDND1-206ENST00000502299 PLCH2O75038 1416 aa22.98■■□□□ 1.27
CLDND1-206ENST00000502299 HSPA2P54652 639 aa22.96■■□□□ 1.27
CLDND1-206ENST00000502299 PLPPR3Q6T4P5 718 aa22.96■■□□□ 1.27
CLDND1-206ENST00000502299 SCAPERQ9BY12 1400 aa22.96■■□□□ 1.27
CLDND1-206ENST00000502299 MAGI2Q86UL8 1455 aa22.96■■□□□ 1.27
CLDND1-206ENST00000502299 POGZQ7Z3K3 1410 aa22.95■■□□□ 1.26
CLDND1-206ENST00000502299 FYCO1Q9BQS8 1478 aa22.94■■□□□ 1.26
CLDND1-206ENST00000502299 MLECQ14165 292 aa22.94■■□□□ 1.26
CLDND1-206ENST00000502299 CCDC18Q5T9S5 1454 aa22.92■■□□□ 1.26
CLDND1-206ENST00000502299 LRRIQ1Q96JM4 1722 aa22.88■■□□□ 1.25
CLDND1-206ENST00000502299 EFCAB2Q5VUJ9 269 aa22.87■■□□□ 1.25
CLDND1-206ENST00000502299 TROQ12816 1431 aaPredicted RBP22.87■■□□□ 1.25
CLDND1-206ENST00000502299 ATP10AO60312 1499 aa22.85■■□□□ 1.25
CLDND1-206ENST00000502299 KIF14Q15058 1648 aa22.83■■□□□ 1.25
CLDND1-206ENST00000502299 C9orf84Q5VXU9 1444 aa22.82■■□□□ 1.24
CLDND1-206ENST00000502299 ARHGEF12Q9NZN5 1544 aa22.82■■□□□ 1.24
CLDND1-206ENST00000502299 AFAP1Q8N556 730 aa22.81■■□□□ 1.24
CLDND1-206ENST00000502299 FER1L4A9Z1Z3 1794 aa22.79■■□□□ 1.24
CLDND1-206ENST00000502299 CEBPAP49715 358 aaPredicted RBP22.79■■□□□ 1.24
CLDND1-206ENST00000502299 VPS8Q8N3P4 1428 aa22.79■■□□□ 1.24
CLDND1-206ENST00000502299 MYO5CQ9NQX4 1742 aa22.79■■□□□ 1.24
CLDND1-206ENST00000502299 ZNF518AQ6AHZ1 1483 aa22.77■■□□□ 1.24
CLDND1-206ENST00000502299 ARHGAP5Q13017 1502 aa22.76■■□□□ 1.23
CLDND1-206ENST00000502299 CERKQ8TCT0 537 aa22.74■■□□□ 1.23
CLDND1-206ENST00000502299 KDM5CP41229 1560 aa22.74■■□□□ 1.23
CLDND1-206ENST00000502299 MTUS2Q5JR59 1369 aa22.73■■□□□ 1.23
CLDND1-206ENST00000502299 DIP2CQ9Y2E4 1556 aa22.68■■□□□ 1.22
CLDND1-206ENST00000502299 MYT1LQ9UL68 1186 aa22.68■■□□□ 1.22
CLDND1-206ENST00000502299 MLH3Q9UHC1 1453 aa22.66■■□□□ 1.22
CLDND1-206ENST00000502299 TRAPPC8Q9Y2L5 1435 aa22.66■■□□□ 1.22
CLDND1-206ENST00000502299 PREX1Q8TCU6 1659 aa22.66■■□□□ 1.22
CLDND1-206ENST00000502299 CDC42BPBQ9Y5S2 1711 aa22.65■■□□□ 1.22
CLDND1-206ENST00000502299 REREQ9P2R6 1566 aa22.64■■□□□ 1.22
CLDND1-206ENST00000502299 APLP2Q06481 763 aa22.64■■□□□ 1.21
CLDND1-206ENST00000502299 ABCA6Q8N139 1617 aa22.64■■□□□ 1.21
CLDND1-206ENST00000502299 UHRF1BP1Q6BDS2 1440 aa22.62■■□□□ 1.21
CLDND1-206ENST00000502299 ABCC1P33527 1531 aa22.62■■□□□ 1.21
CLDND1-206ENST00000502299 EHBP1L1Q8N3D4 1523 aa22.62■■□□□ 1.21
CLDND1-206ENST00000502299 TIAM1Q13009 1591 aa22.61■■□□□ 1.21
CLDND1-206ENST00000502299 MAP3K1Q13233 1512 aa22.61■■□□□ 1.21
CLDND1-206ENST00000502299 PREX2Q70Z35 1606 aa22.6■■□□□ 1.21
CLDND1-206ENST00000502299 CCNB3Q8WWL7 1395 aa22.6■■□□□ 1.21
CLDND1-206ENST00000502299 AGLP35573 1532 aa22.59■■□□□ 1.21
CLDND1-206ENST00000502299 STRCQ7RTU9 1775 aa22.58■■□□□ 1.21
CLDND1-206ENST00000502299 GPATCH8Q9UKJ3 1502 aaKnown RBP22.58■■□□□ 1.21
CLDND1-206ENST00000502299 DMRT2Q9Y5R5 561 aa22.58■■□□□ 1.21
CLDND1-206ENST00000502299 CFDP1Q9UEE9 299 aaPredicted RBP22.57■■□□□ 1.2
CLDND1-206ENST00000502299 LRRC9Q6ZRR7 1453 aa22.55■■□□□ 1.2
CLDND1-206ENST00000502299 ZNF777Q9ULD5 760 aaPredicted RBP22.55■■□□□ 1.2
CLDND1-206ENST00000502299 ITSN2Q9NZM3 1697 aa22.55■■□□□ 1.2
CLDND1-206ENST00000502299 CDC42BPAQ5VT25 1732 aa22.54■■□□□ 1.2
CLDND1-206ENST00000502299 KANK4Q5T7N3 995 aaPredicted RBP22.54■■□□□ 1.2
CLDND1-206ENST00000502299 C3P01024 1663 aa22.54■■□□□ 1.2
CLDND1-206ENST00000502299 KIDINS220Q9ULH0 1771 aa22.53■■□□□ 1.2
CLDND1-206ENST00000502299 ESF1Q9H501 851 aaKnown RBP22.53■■□□□ 1.2
CLDND1-206ENST00000502299 SETD1BQ9UPS6 1966 aaKnown RBP22.52■■□□□ 1.2
CLDND1-206ENST00000502299 SUPT6HQ7KZ85 1726 aaKnown RBP22.51■■□□□ 1.19
CLDND1-206ENST00000502299 NCOA2Q15596 1464 aa22.5■■□□□ 1.19
CLDND1-206ENST00000502299 PTPRTO14522 1441 aa22.49■■□□□ 1.19
CLDND1-206ENST00000502299 SAMD9LQ8IVG5 1584 aa22.49■■□□□ 1.19
CLDND1-206ENST00000502299 CNTLNQ9NXG0 1405 aa22.48■■□□□ 1.19
CLDND1-206ENST00000502299 HNRNPMP52272 730 aaKnown RBP eCLIP22.47■■□□□ 1.19
CLDND1-206ENST00000502299 SYCP2Q9BX26 1530 aa22.46■■□□□ 1.19
CLDND1-206ENST00000502299 SPAG9O60271 1321 aaKnown RBP22.45■■□□□ 1.18
CLDND1-206ENST00000502299 PLEKHH2Q8IVE3 1493 aa22.45■■□□□ 1.18
CLDND1-206ENST00000502299 KIAA1107Q9UPP5 1409 aa22.44■■□□□ 1.18
CLDND1-206ENST00000502299 NCOA1Q15788 1441 aa22.43■■□□□ 1.18
CLDND1-206ENST00000502299 ZMYM3Q14202 1370 aa22.42■■□□□ 1.18
CLDND1-206ENST00000502299 ZNF644Q9H582 1327 aaPredicted RBP22.41■■□□□ 1.18
CLDND1-206ENST00000502299 LTBP4Q8N2S1 1624 aa22.41■■□□□ 1.18
CLDND1-206ENST00000502299 NPATQ14207 1427 aa22.4■■□□□ 1.18
CLDND1-206ENST00000502299 ATP7AQ04656 1500 aa22.38■■□□□ 1.17
CLDND1-206ENST00000502299 RSPH4AQ5TD94 716 aa22.37■■□□□ 1.17
CLDND1-206ENST00000502299 ILDR2Q71H61 639 aa22.36■■□□□ 1.17
CLDND1-206ENST00000502299 DISP3Q9P2K9 1392 aa22.36■■□□□ 1.17
CLDND1-206ENST00000502299 MROH2AA6NES4 1674 aa22.36■■□□□ 1.17
CLDND1-206ENST00000502299 CAMSAP1Q5T5Y3 1602 aa22.35■■□□□ 1.17
CLDND1-206ENST00000502299 A2MP01023 1474 aa22.35■■□□□ 1.17
CLDND1-206ENST00000502299 PLXNC1O60486 1568 aa22.35■■□□□ 1.17
CLDND1-206ENST00000502299 INO80Q9ULG1 1556 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-206ENST00000502299 NCKAP5LQ9HCH0 1330 aa22.33■■□□□ 1.17
CLDND1-206ENST00000502299 MYOM3Q5VTT5 1437 aa22.33■■□□□ 1.17
CLDND1-206ENST00000502299 MIA2Q96PC5 1412 aa22.33■■□□□ 1.17
CLDND1-206ENST00000502299 GGT6Q6P531 493 aa22.32■■□□□ 1.16
CLDND1-206ENST00000502299 MBD5Q9P267 1494 aa22.32■■□□□ 1.16
CLDND1-206ENST00000502299 PTPRKQ15262 1439 aa22.31■■□□□ 1.16
CLDND1-206ENST00000502299 CAMSAP2Q08AD1 1489 aa22.3■■□□□ 1.16
CLDND1-206ENST00000502299 CLTCQ00610 1675 aaKnown RBP22.3■■□□□ 1.16
CLDND1-206ENST00000502299 IQSEC2Q5JU85 1478 aa22.28■■□□□ 1.16
CLDND1-206ENST00000502299 ZNF335Q9H4Z2 1342 aaPredicted RBP22.28■■□□□ 1.16
CLDND1-206ENST00000502299 TSPY4P0CV99 314 aa22.27■■□□□ 1.16
CLDND1-206ENST00000502299 TSPY10P0CW01 314 aa22.27■■□□□ 1.16
CLDND1-206ENST00000502299 MYO3AQ8NEV4 1616 aa22.25■■□□□ 1.15
CLDND1-206ENST00000502299 PPP6R1Q9UPN7 881 aa22.25■■□□□ 1.15
CLDND1-206ENST00000502299 PLA2R1Q13018 1463 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms