RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ATP10BO94823 1461 aa12.16□□□□□ -0.46
PDZRN3-212ENST00000498048 MIA2Q96PC5 1412 aa12.16□□□□□ -0.46
PDZRN3-212ENST00000498048 UHRF1BP1LA0JNW5 1464 aa12.15□□□□□ -0.46
PDZRN3-212ENST00000498048 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
PDZRN3-212ENST00000498048 ZEB1P37275 1124 aaPredicted RBP12.15□□□□□ -0.46
PDZRN3-212ENST00000498048 CAMSAP2Q08AD1 1489 aa12.14□□□□□ -0.47
PDZRN3-212ENST00000498048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.14□□□□□ -0.47
PDZRN3-212ENST00000498048 FAM50AQ14320 339 aaKnown RBP12.14□□□□□ -0.47
PDZRN3-212ENST00000498048 CCER1Q8TC90 406 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-212ENST00000498048 CDK11AQ9UQ88 783 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-212ENST00000498048 ABCC10Q5T3U5 1492 aa12.13□□□□□ -0.47
PDZRN3-212ENST00000498048 KDM5BQ9UGL1 1544 aa12.11□□□□□ -0.47
PDZRN3-212ENST00000498048 SAMD9LQ8IVG5 1584 aa12.1□□□□□ -0.47
PDZRN3-212ENST00000498048 ITGAEP38570 1179 aa12.1□□□□□ -0.47
PDZRN3-212ENST00000498048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.09□□□□□ -0.47
PDZRN3-212ENST00000498048 AKNAQ7Z591 1439 aa12.09□□□□□ -0.47
PDZRN3-212ENST00000498048 GPATCH8Q9UKJ3 1502 aaKnown RBP12.08□□□□□ -0.48
PDZRN3-212ENST00000498048 SETD5Q9C0A6 1442 aa12.08□□□□□ -0.48
PDZRN3-212ENST00000498048 ARHGEF5Q12774 1597 aa12.08□□□□□ -0.48
PDZRN3-212ENST00000498048 RAB3GAP2Q9H2M9 1393 aa12.07□□□□□ -0.48
PDZRN3-212ENST00000498048 HFM1A2PYH4 1435 aa12.07□□□□□ -0.48
PDZRN3-212ENST00000498048 DAPK1P53355 1430 aa12.07□□□□□ -0.48
PDZRN3-212ENST00000498048 ABCA9Q8IUA7 1624 aa12.06□□□□□ -0.48
PDZRN3-212ENST00000498048 ARHGAP5Q13017 1502 aa12.06□□□□□ -0.48
PDZRN3-212ENST00000498048 PTPRKQ15262 1439 aa12.05□□□□□ -0.48
PDZRN3-212ENST00000498048 RIMBP3CA6NJZ7 1639 aa12.05□□□□□ -0.48
PDZRN3-212ENST00000498048 RIMBP3BA6NNM3 1639 aa12.05□□□□□ -0.48
PDZRN3-212ENST00000498048 KDM6BO15054 1643 aa12.05□□□□□ -0.48
PDZRN3-212ENST00000498048 RIMBP3Q9UFD9 1639 aa12.05□□□□□ -0.48
PDZRN3-212ENST00000498048 SHANK2Q9UPX8 1470 aa12.05□□□□□ -0.48
PDZRN3-212ENST00000498048 DHX57Q6P158 1386 aaKnown RBP12.05□□□□□ -0.48
PDZRN3-212ENST00000498048 MAPKBP1O60336 1514 aa12.04□□□□□ -0.48
PDZRN3-212ENST00000498048 SYCP2Q9BX26 1530 aa12.04□□□□□ -0.48
PDZRN3-212ENST00000498048 CFAP74Q9C0B2 1584 aa12.03□□□□□ -0.48
PDZRN3-212ENST00000498048 WDR7Q9Y4E6 1490 aa12.02□□□□□ -0.48
PDZRN3-212ENST00000498048 MAST1Q9Y2H9 1570 aa12.02□□□□□ -0.49
PDZRN3-212ENST00000498048 NAIPQ13075 1403 aa12.02□□□□□ -0.49
PDZRN3-212ENST00000498048 ABCC1P33527 1531 aa12.01□□□□□ -0.49
PDZRN3-212ENST00000498048 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
PDZRN3-212ENST00000498048 PLEKHD1A6NEE1 506 aa12.01□□□□□ -0.49
PDZRN3-212ENST00000498048 ADGRL2O95490 1459 aa12.01□□□□□ -0.49
PDZRN3-212ENST00000498048 PLXNC1O60486 1568 aa12.01□□□□□ -0.49
PDZRN3-212ENST00000498048 OSCARQ8IYS5 282 aa12□□□□□ -0.49
PDZRN3-212ENST00000498048 ABCC5O15440 1437 aa11.99□□□□□ -0.49
PDZRN3-212ENST00000498048 CCDC141Q6ZP82 1450 aa11.99□□□□□ -0.49
PDZRN3-212ENST00000498048 ROCK1Q13464 1354 aa11.97□□□□□ -0.49
PDZRN3-212ENST00000498048 CLSPNQ9HAW4 1339 aa11.97□□□□□ -0.49
PDZRN3-212ENST00000498048 PLEKHH2Q8IVE3 1493 aa11.96□□□□□ -0.49
PDZRN3-212ENST00000498048 CFDP1Q9UEE9 299 aaPredicted RBP11.96□□□□□ -0.49
PDZRN3-212ENST00000498048 DCAF8L1A6NGE4 600 aa11.95□□□□□ -0.5
PDZRN3-212ENST00000498048 C9orf84Q5VXU9 1444 aa11.94□□□□□ -0.5
PDZRN3-212ENST00000498048 UNC13BO14795 1591 aa11.93□□□□□ -0.5
PDZRN3-212ENST00000498048 INO80Q9ULG1 1556 aaPredicted RBP11.93□□□□□ -0.5
PDZRN3-212ENST00000498048 ASXL2Q76L83 1435 aa11.93□□□□□ -0.5
PDZRN3-212ENST00000498048 ZNF644Q9H582 1327 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-212ENST00000498048 MAP3K4Q9Y6R4 1608 aa11.92□□□□□ -0.5
PDZRN3-212ENST00000498048 ZNF777Q9ULD5 760 aaPredicted RBP11.91□□□□□ -0.5
PDZRN3-212ENST00000498048 ZFYVE16Q7Z3T8 1539 aa11.91□□□□□ -0.5
PDZRN3-212ENST00000498048 MBD5Q9P267 1494 aa11.9□□□□□ -0.5
PDZRN3-212ENST00000498048 PLCH2O75038 1416 aa11.9□□□□□ -0.5
PDZRN3-212ENST00000498048 KDM5DQ9BY66 1539 aa11.9□□□□□ -0.5
PDZRN3-212ENST00000498048 CHIC2Q9UKJ5 165 aa11.89□□□□□ -0.51
PDZRN3-212ENST00000498048 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
PDZRN3-212ENST00000498048 RRP7BPQ9NSQ0 103 aa11.88□□□□□ -0.51
PDZRN3-212ENST00000498048 ANKRD30AQ9BXX3 1397 aa11.88□□□□□ -0.51
PDZRN3-212ENST00000498048 KIF13AQ9H1H9 1805 aa11.88□□□□□ -0.51
PDZRN3-212ENST00000498048 NCOA1Q15788 1441 aa11.87□□□□□ -0.51
PDZRN3-212ENST00000498048 IQGAP3Q86VI3 1631 aa11.87□□□□□ -0.51
PDZRN3-212ENST00000498048 EIF2AK4Q9P2K8 1649 aaKnown RBP11.87□□□□□ -0.51
PDZRN3-212ENST00000498048 FANCAO15360 1455 aa11.87□□□□□ -0.51
PDZRN3-212ENST00000498048 DIP2BQ9P265 1576 aa11.87□□□□□ -0.51
PDZRN3-212ENST00000498048 KIAA1107Q9UPP5 1409 aa11.86□□□□□ -0.51
PDZRN3-212ENST00000498048 ARHGEF12Q9NZN5 1544 aa11.86□□□□□ -0.51
PDZRN3-212ENST00000498048 DEPDC5O75140 1603 aa11.86□□□□□ -0.51
PDZRN3-212ENST00000498048 ATP7AQ04656 1500 aa11.86□□□□□ -0.51
PDZRN3-212ENST00000498048 HECW2Q9P2P5 1572 aa11.85□□□□□ -0.51
PDZRN3-212ENST00000498048 RICTORQ6R327 1708 aa11.85□□□□□ -0.51
PDZRN3-212ENST00000498048 DUOX2Q9NRD8 1548 aa11.85□□□□□ -0.51
PDZRN3-212ENST00000498048 KIDINS220Q9ULH0 1771 aa11.84□□□□□ -0.51
PDZRN3-212ENST00000498048 DENND4BO75064 1496 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-212ENST00000498048 KCNH8Q96L42 1107 aa11.84□□□□□ -0.51
PDZRN3-212ENST00000498048 ANKRD50Q9ULJ7 1429 aa11.84□□□□□ -0.51
PDZRN3-212ENST00000498048 PPRC1Q5VV67 1664 aaKnown RBP11.84□□□□□ -0.51
PDZRN3-212ENST00000498048 GLI2P10070 1586 aa11.84□□□□□ -0.51
PDZRN3-212ENST00000498048 ADGRL1O94910 1474 aa11.83□□□□□ -0.52
PDZRN3-212ENST00000498048 PZPP20742 1482 aa11.83□□□□□ -0.52
PDZRN3-212ENST00000498048 KIF15Q9NS87 1388 aa11.83□□□□□ -0.52
PDZRN3-212ENST00000498048 KDM5CP41229 1560 aa11.82□□□□□ -0.52
PDZRN3-212ENST00000498048 ACIN1Q9UKV3 1341 aaKnown RBP11.82□□□□□ -0.52
PDZRN3-212ENST00000498048 MAGI2Q86UL8 1455 aa11.81□□□□□ -0.52
PDZRN3-212ENST00000498048 CEP152O94986 1710 aa11.8□□□□□ -0.52
PDZRN3-212ENST00000498048 ABCA6Q8N139 1617 aa11.8□□□□□ -0.52
PDZRN3-212ENST00000498048 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
PDZRN3-212ENST00000498048 SPHKAPQ2M3C7 1700 aa11.8□□□□□ -0.52
PDZRN3-212ENST00000498048 BCORL1Q5H9F3 1711 aa11.8□□□□□ -0.52
PDZRN3-212ENST00000498048 ERBINQ96RT1 1412 aa11.79□□□□□ -0.52
PDZRN3-212ENST00000498048 HNRNPMP52272 730 aaKnown RBP eCLIP11.79□□□□□ -0.52
PDZRN3-212ENST00000498048 FAM135AQ9P2D6 1515 aa11.79□□□□□ -0.52
PDZRN3-212ENST00000498048 TRAPPC8Q9Y2L5 1435 aa11.78□□□□□ -0.52
PDZRN3-212ENST00000498048 TET3O43151 1660 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms