RNA–Protein interactions for RNA: ENST00000496703.1

ITGB5-210, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-210ENST00000496703 ARHGAP5Q13017 1502 aa25.88■■□□□ 1.73
ITGB5-210ENST00000496703 EFCAB2Q5VUJ9 269 aa25.84■■□□□ 1.73
ITGB5-210ENST00000496703 SCAPERQ9BY12 1400 aa25.84■■□□□ 1.73
ITGB5-210ENST00000496703 VPS8Q8N3P4 1428 aa25.82■■□□□ 1.72
ITGB5-210ENST00000496703 ZMYM4Q5VZL5 1548 aa25.82■■□□□ 1.72
ITGB5-210ENST00000496703 POGZQ7Z3K3 1410 aa25.8■■□□□ 1.72
ITGB5-210ENST00000496703 ARHGEF40Q8TER5 1519 aa25.79■■□□□ 1.72
ITGB5-210ENST00000496703 MTUS2Q5JR59 1369 aa25.79■■□□□ 1.72
ITGB5-210ENST00000496703 EHBP1L1Q8N3D4 1523 aa25.77■■□□□ 1.72
ITGB5-210ENST00000496703 GPATCH8Q9UKJ3 1502 aaKnown RBP25.77■■□□□ 1.72
ITGB5-210ENST00000496703 TIAM1Q13009 1591 aa25.76■■□□□ 1.71
ITGB5-210ENST00000496703 SIGLEC1Q9BZZ2 1709 aa25.76■■□□□ 1.71
ITGB5-210ENST00000496703 ITSN2Q9NZM3 1697 aa25.75■■□□□ 1.71
ITGB5-210ENST00000496703 ARHGEF12Q9NZN5 1544 aa25.75■■□□□ 1.71
ITGB5-210ENST00000496703 YEATS2Q9ULM3 1422 aa25.75■■□□□ 1.71
ITGB5-210ENST00000496703 ABCC1P33527 1531 aa25.74■■□□□ 1.71
ITGB5-210ENST00000496703 SAMD9LQ8IVG5 1584 aa25.73■■□□□ 1.71
ITGB5-210ENST00000496703 ZFYVE16Q7Z3T8 1539 aa25.73■■□□□ 1.71
ITGB5-210ENST00000496703 KDM5CP41229 1560 aa25.71■■□□□ 1.71
ITGB5-210ENST00000496703 ZNF518AQ6AHZ1 1483 aa25.69■■□□□ 1.7
ITGB5-210ENST00000496703 AFAP1Q8N556 730 aa25.69■■□□□ 1.7
ITGB5-210ENST00000496703 MAGI2Q86UL8 1455 aa25.68■■□□□ 1.7
ITGB5-210ENST00000496703 TRAPPC8Q9Y2L5 1435 aa25.68■■□□□ 1.7
ITGB5-210ENST00000496703 CCNB3Q8WWL7 1395 aa25.68■■□□□ 1.7
ITGB5-210ENST00000496703 BCORL1Q5H9F3 1711 aa25.67■■□□□ 1.7
ITGB5-210ENST00000496703 SUPT6HQ7KZ85 1726 aaKnown RBP25.67■■□□□ 1.7
ITGB5-210ENST00000496703 ADAMTSL3P82987 1691 aa25.67■■□□□ 1.7
ITGB5-210ENST00000496703 ZNF777Q9ULD5 760 aaPredicted RBP25.65■■□□□ 1.7
ITGB5-210ENST00000496703 SYCP2Q9BX26 1530 aa25.64■■□□□ 1.7
ITGB5-210ENST00000496703 NCOA2Q15596 1464 aa25.64■■□□□ 1.69
ITGB5-210ENST00000496703 HECW2Q9P2P5 1572 aa25.64■■□□□ 1.69
ITGB5-210ENST00000496703 LRRC9Q6ZRR7 1453 aa25.63■■□□□ 1.69
ITGB5-210ENST00000496703 CFDP1Q9UEE9 299 aaPredicted RBP25.62■■□□□ 1.69
ITGB5-210ENST00000496703 MAP3K1Q13233 1512 aa25.62■■□□□ 1.69
ITGB5-210ENST00000496703 KANK4Q5T7N3 995 aaPredicted RBP25.61■■□□□ 1.69
ITGB5-210ENST00000496703 ABCA6Q8N139 1617 aa25.6■■□□□ 1.69
ITGB5-210ENST00000496703 KIDINS220Q9ULH0 1771 aa25.6■■□□□ 1.69
ITGB5-210ENST00000496703 ARID4BQ4LE39 1312 aaPredicted RBP25.6■■□□□ 1.69
ITGB5-210ENST00000496703 DIP2CQ9Y2E4 1556 aa25.59■■□□□ 1.69
ITGB5-210ENST00000496703 ATP10AO60312 1499 aa25.59■■□□□ 1.69
ITGB5-210ENST00000496703 MADDQ8WXG6 1647 aa25.58■■□□□ 1.69
ITGB5-210ENST00000496703 MLH3Q9UHC1 1453 aa25.58■■□□□ 1.69
ITGB5-210ENST00000496703 ZNF644Q9H582 1327 aaPredicted RBP25.58■■□□□ 1.69
ITGB5-210ENST00000496703 HNRNPMP52272 730 aaKnown RBP eCLIP25.57■■□□□ 1.682e-6■■■□□ 15
ITGB5-210ENST00000496703 C9orf84Q5VXU9 1444 aa25.54■■□□□ 1.68
ITGB5-210ENST00000496703 KIAA1107Q9UPP5 1409 aa25.54■■□□□ 1.68
ITGB5-210ENST00000496703 PLEKHH2Q8IVE3 1493 aa25.52■■□□□ 1.68
ITGB5-210ENST00000496703 RIMS1Q86UR5 1692 aaKnown RBP25.51■■□□□ 1.67
ITGB5-210ENST00000496703 MYT1LQ9UL68 1186 aa25.5■■□□□ 1.67
ITGB5-210ENST00000496703 MBD5Q9P267 1494 aa25.49■■□□□ 1.67
ITGB5-210ENST00000496703 REREQ9P2R6 1566 aa25.48■■□□□ 1.67
ITGB5-210ENST00000496703 INO80Q9ULG1 1556 aaPredicted RBP25.48■■□□□ 1.67
ITGB5-210ENST00000496703 PTPRMP28827 1452 aa25.48■■□□□ 1.67
ITGB5-210ENST00000496703 FER1L4A9Z1Z3 1794 aa25.47■■□□□ 1.67
ITGB5-210ENST00000496703 CAMSAP2Q08AD1 1489 aa25.47■■□□□ 1.67
ITGB5-210ENST00000496703 MLECQ14165 292 aa25.46■■□□□ 1.67
ITGB5-210ENST00000496703 ATP7AQ04656 1500 aa25.45■■□□□ 1.66
ITGB5-210ENST00000496703 SPAG9O60271 1321 aaKnown RBP25.43■■□□□ 1.66
ITGB5-210ENST00000496703 APLP2Q06481 763 aa25.4■■□□□ 1.66
ITGB5-210ENST00000496703 AGLP35573 1532 aa25.39■■□□□ 1.66
ITGB5-210ENST00000496703 MYOM3Q5VTT5 1437 aa25.38■■□□□ 1.65
ITGB5-210ENST00000496703 CCDC141Q6ZP82 1450 aa25.36■■□□□ 1.65
ITGB5-210ENST00000496703 ARHGEF5Q12774 1597 aa25.35■■□□□ 1.65
ITGB5-210ENST00000496703 ADGBQ8N7X0 1667 aa25.35■■□□□ 1.65
ITGB5-210ENST00000496703 PLXNC1O60486 1568 aa25.35■■□□□ 1.65
ITGB5-210ENST00000496703 MIA2Q96PC5 1412 aa25.32■■□□□ 1.64
ITGB5-210ENST00000496703 A2MP01023 1474 aa25.31■■□□□ 1.64
ITGB5-210ENST00000496703 RTEL1-TNFRSF6BF6WH68 1400 aa25.3■■□□□ 1.64
ITGB5-210ENST00000496703 PLPPR3Q6T4P5 718 aa25.29■■□□□ 1.64
ITGB5-210ENST00000496703 PTPN23Q9H3S7 1636 aa25.28■■□□□ 1.64
ITGB5-210ENST00000496703 RSPH4AQ5TD94 716 aa25.26■■□□□ 1.63
ITGB5-210ENST00000496703 CEBPAP49715 358 aaPredicted RBP25.24■■□□□ 1.63
ITGB5-210ENST00000496703 C3P01024 1663 aa25.23■■□□□ 1.63
ITGB5-210ENST00000496703 MAST1Q9Y2H9 1570 aa25.22■■□□□ 1.63
ITGB5-210ENST00000496703 FGD6Q6ZV73 1430 aa25.22■■□□□ 1.63
ITGB5-210ENST00000496703 CROCC2H7BZ55 1655 aa25.21■■□□□ 1.63
ITGB5-210ENST00000496703 DHX29Q7Z478 1369 aaKnown RBP25.2■■□□□ 1.63
ITGB5-210ENST00000496703 SETD1BQ9UPS6 1966 aaKnown RBP25.2■■□□□ 1.63
ITGB5-210ENST00000496703 TCOF1Q13428 1488 aaKnown RBP25.2■■□□□ 1.62
ITGB5-210ENST00000496703 LMTK3Q96Q04 1460 aa25.2■■□□□ 1.62
ITGB5-210ENST00000496703 CLTCQ00610 1675 aaKnown RBP25.18■■□□□ 1.62
ITGB5-210ENST00000496703 TSPY4P0CV99 314 aa25.18■■□□□ 1.62
ITGB5-210ENST00000496703 TSPY10P0CW01 314 aa25.18■■□□□ 1.62
ITGB5-210ENST00000496703 DNMT1P26358 1616 aaKnown RBP25.16■■□□□ 1.62
ITGB5-210ENST00000496703 ABCC5O15440 1437 aa25.16■■□□□ 1.62
ITGB5-210ENST00000496703 MROH2AA6NES4 1674 aa25.16■■□□□ 1.62
ITGB5-210ENST00000496703 GGT6Q6P531 493 aa25.13■■□□□ 1.61
ITGB5-210ENST00000496703 PREX1Q8TCU6 1659 aa25.13■■□□□ 1.61
ITGB5-210ENST00000496703 DAPK1P53355 1430 aa25.12■■□□□ 1.61
ITGB5-210ENST00000496703 CNTLNQ9NXG0 1405 aa25.12■■□□□ 1.61
ITGB5-210ENST00000496703 PPARGC1BQ86YN6 1023 aaKnown RBP25.11■■□□□ 1.61
ITGB5-210ENST00000496703 SHANK2Q9UPX8 1470 aa25.1■■□□□ 1.61
ITGB5-210ENST00000496703 ESF1Q9H501 851 aaKnown RBP25.1■■□□□ 1.61
ITGB5-210ENST00000496703 KIF3BO15066 747 aa25.08■■□□□ 1.61
ITGB5-210ENST00000496703 HSPA2P54652 639 aa25.07■■□□□ 1.6
ITGB5-210ENST00000496703 ZMYM3Q14202 1370 aa25.06■■□□□ 1.6
ITGB5-210ENST00000496703 RNF17Q9BXT8 1623 aaKnown RBP25.04■■□□□ 1.6
ITGB5-210ENST00000496703 EIF2AK4Q9P2K8 1649 aaKnown RBP25.04■■□□□ 1.6
ITGB5-210ENST00000496703 DUOX2Q9NRD8 1548 aa25.02■■□□□ 1.6
ITGB5-210ENST00000496703 FAM50AQ14320 339 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms