RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 HFM1A2PYH4 1435 aa21.67■■□□□ 1.06
CHPF2-204ENST00000495645 TCOF1Q13428 1488 aaKnown RBP21.66■■□□□ 1.06
CHPF2-204ENST00000495645 MIA2Q96PC5 1412 aa21.66■■□□□ 1.06
CHPF2-204ENST00000495645 KDM6BO15054 1643 aa21.65■■□□□ 1.06
CHPF2-204ENST00000495645 ABCC5O15440 1437 aa21.65■■□□□ 1.06
CHPF2-204ENST00000495645 HNRNPMP52272 730 aaKnown RBP eCLIP21.64■■□□□ 1.065e-13■■■□□ 14.8
CHPF2-204ENST00000495645 ZNF316A6NFI3 1004 aaPredicted RBP21.63■■□□□ 1.05
CHPF2-204ENST00000495645 ACIN1Q9UKV3 1341 aaKnown RBP21.63■■□□□ 1.05
CHPF2-204ENST00000495645 CLSPNQ9HAW4 1339 aa21.62■■□□□ 1.05
CHPF2-204ENST00000495645 DAPK1P53355 1430 aa21.61■■□□□ 1.05
CHPF2-204ENST00000495645 CAMSAP2Q08AD1 1489 aa21.59■■□□□ 1.05
CHPF2-204ENST00000495645 ABCC10Q5T3U5 1492 aa21.57■■□□□ 1.04
CHPF2-204ENST00000495645 MYT1Q01538 1121 aa21.55■■□□□ 1.04
CHPF2-204ENST00000495645 YTHDC1Q96MU7 727 aaKnown RBP21.54■■□□□ 1.04
CHPF2-204ENST00000495645 HIRIP3Q9BW71 556 aaPredicted RBP21.54■■□□□ 1.04
CHPF2-204ENST00000495645 GTF3C3Q9Y5Q9 886 aa21.53■■□□□ 1.04
CHPF2-204ENST00000495645 ABCC2Q92887 1545 aa21.52■■□□□ 1.04
CHPF2-204ENST00000495645 DENND4BO75064 1496 aaPredicted RBP21.49■■□□□ 1.03
CHPF2-204ENST00000495645 MPHOSPH9Q99550 1183 aa21.49■■□□□ 1.03
CHPF2-204ENST00000495645 CDC42BPAQ5VT25 1732 aa21.47■■□□□ 1.03
CHPF2-204ENST00000495645 DNMT1P26358 1616 aaKnown RBP21.46■■□□□ 1.03
CHPF2-204ENST00000495645 AKNAQ7Z591 1439 aa21.46■■□□□ 1.03
CHPF2-204ENST00000495645 ADCY10Q96PN6 1610 aa21.46■■□□□ 1.03
CHPF2-204ENST00000495645 TTC37Q6PGP7 1564 aa21.45■■□□□ 1.02
CHPF2-204ENST00000495645 NCOA1Q15788 1441 aa21.45■■□□□ 1.02
CHPF2-204ENST00000495645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.43■■□□□ 1.026e-7■■■■□ 20.4
CHPF2-204ENST00000495645 SLC4A1APQ9BWU0 796 aaKnown RBP21.42■■□□□ 1.02
CHPF2-204ENST00000495645 TSPY4P0CV99 314 aa21.42■■□□□ 1.02
CHPF2-204ENST00000495645 TSPY10P0CW01 314 aa21.42■■□□□ 1.02
CHPF2-204ENST00000495645 ZCCHC11Q5TAX3 1644 aaKnown RBP21.4■■□□□ 1.02
CHPF2-204ENST00000495645 ITSN2Q9NZM3 1697 aa21.39■■□□□ 1.01
CHPF2-204ENST00000495645 CENPBP07199 599 aaPredicted RBP21.39■■□□□ 1.01
CHPF2-204ENST00000495645 ROCK1Q13464 1354 aa21.39■■□□□ 1.01
CHPF2-204ENST00000495645 ARHGAP5Q13017 1502 aa21.38■■□□□ 1.01
CHPF2-204ENST00000495645 C9orf84Q5VXU9 1444 aa21.38■■□□□ 1.01
CHPF2-204ENST00000495645 MBD5Q9P267 1494 aa21.38■■□□□ 1.01
CHPF2-204ENST00000495645 KDM5BQ9UGL1 1544 aa21.37■■□□□ 1.01
CHPF2-204ENST00000495645 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
CHPF2-204ENST00000495645 MIER1Q8N108 512 aa21.36■■□□□ 1.01
CHPF2-204ENST00000495645 TONSLQ96HA7 1378 aa21.36■■□□□ 1.01
CHPF2-204ENST00000495645 SAMD9LQ8IVG5 1584 aa21.36■■□□□ 1.01
CHPF2-204ENST00000495645 CDC42BPBQ9Y5S2 1711 aa21.36■■□□□ 1.01
CHPF2-204ENST00000495645 GCC2Q8IWJ2 1684 aa21.36■■□□□ 1.01
CHPF2-204ENST00000495645 ANKRD30AQ9BXX3 1397 aa21.35■■□□□ 1.01
CHPF2-204ENST00000495645 AFAP1Q8N556 730 aa21.34■■□□□ 1.01
CHPF2-204ENST00000495645 CYB5RLQ6IPT4 315 aa21.34■■□□□ 1.01
CHPF2-204ENST00000495645 SYCP2Q9BX26 1530 aa21.34■■□□□ 1.01
CHPF2-204ENST00000495645 ANKRD50Q9ULJ7 1429 aa21.33■■□□□ 1
CHPF2-204ENST00000495645 ARHGEF12Q9NZN5 1544 aa21.32■■□□□ 1
CHPF2-204ENST00000495645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.32■■□□□ 16e-6■□□□□ 8.3
CHPF2-204ENST00000495645 UHRF1BP1LA0JNW5 1464 aa21.31■■□□□ 1
CHPF2-204ENST00000495645 KIF15Q9NS87 1388 aa21.31■■□□□ 1
CHPF2-204ENST00000495645 PKD2Q13563 968 aa21.3■■□□□ 1
CHPF2-204ENST00000495645 L3MBTL2Q969R5 705 aa21.28■■□□□ 1
CHPF2-204ENST00000495645 PREX2Q70Z35 1606 aa21.28■■□□□ 1
CHPF2-204ENST00000495645 NUP155O75694 1391 aa21.28■■□□□ 1
CHPF2-204ENST00000495645 EFCAB2Q5VUJ9 269 aa21.27■■□□□ 1
CHPF2-204ENST00000495645 ASXL2Q76L83 1435 aa21.27■■□□□ 1
CHPF2-204ENST00000495645 PLCH2O75038 1416 aa21.25■□□□□ 0.99
CHPF2-204ENST00000495645 TRAPPC8Q9Y2L5 1435 aa21.25■□□□□ 0.99
CHPF2-204ENST00000495645 PZPP20742 1482 aa21.25■□□□□ 0.99
CHPF2-204ENST00000495645 NPM1P06748 294 aaKnown RBP eCLIP21.24■□□□□ 0.99
CHPF2-204ENST00000495645 ADGRL2O95490 1459 aa21.24■□□□□ 0.99
CHPF2-204ENST00000495645 CCDC141Q6ZP82 1450 aa21.24■□□□□ 0.99
CHPF2-204ENST00000495645 ANKRD30BQ9BXX2 1392 aa21.24■□□□□ 0.99
CHPF2-204ENST00000495645 WDR7Q9Y4E6 1490 aa21.23■□□□□ 0.99
CHPF2-204ENST00000495645 CROCC2H7BZ55 1655 aa21.22■□□□□ 0.99
CHPF2-204ENST00000495645 MYT1LQ9UL68 1186 aa21.22■□□□□ 0.99
CHPF2-204ENST00000495645 ZNF326Q5BKZ1 582 aaKnown RBP21.19■□□□□ 0.98
CHPF2-204ENST00000495645 DDX10Q13206 875 aaKnown RBP21.18■□□□□ 0.98
CHPF2-204ENST00000495645 MYO5CQ9NQX4 1742 aa21.18■□□□□ 0.98
CHPF2-204ENST00000495645 NBPF8Q3BBV2 869 aa21.17■□□□□ 0.98
CHPF2-204ENST00000495645 ADGBQ8N7X0 1667 aa21.16■□□□□ 0.98
CHPF2-204ENST00000495645 TIMELESSQ9UNS1 1208 aa21.16■□□□□ 0.98
CHPF2-204ENST00000495645 PLEKHH2Q8IVE3 1493 aa21.16■□□□□ 0.98
CHPF2-204ENST00000495645 SHANK2Q9UPX8 1470 aa21.15■□□□□ 0.98
CHPF2-204ENST00000495645 ARHGEF5Q12774 1597 aa21.14■□□□□ 0.97
CHPF2-204ENST00000495645 RSPH4AQ5TD94 716 aa21.13■□□□□ 0.97
CHPF2-204ENST00000495645 SPAG9O60271 1321 aaKnown RBP21.13■□□□□ 0.97
CHPF2-204ENST00000495645 FANCAO15360 1455 aa21.12■□□□□ 0.97
CHPF2-204ENST00000495645 KIAA1107Q9UPP5 1409 aa21.11■□□□□ 0.97
CHPF2-204ENST00000495645 KDM2AQ9Y2K7 1162 aa21.09■□□□□ 0.97
CHPF2-204ENST00000495645 SCAPERQ9BY12 1400 aa21.09■□□□□ 0.97
CHPF2-204ENST00000495645 ABCC1P33527 1531 aa21.07■□□□□ 0.96
CHPF2-204ENST00000495645 RPRD2Q5VT52 1461 aaKnown RBP21.07■□□□□ 0.96
CHPF2-204ENST00000495645 RGL3Q3MIN7 710 aa21.07■□□□□ 0.96
CHPF2-204ENST00000495645 RAPGEF3O95398 923 aa21.06■□□□□ 0.96
CHPF2-204ENST00000495645 HSPA5P11021 654 aaKnown RBP21.04■□□□□ 0.96
CHPF2-204ENST00000495645 ADGRL1O94910 1474 aa21.04■□□□□ 0.96
CHPF2-204ENST00000495645 CD109Q6YHK3 1445 aa21.03■□□□□ 0.96
CHPF2-204ENST00000495645 TEX14Q8IWB6 1497 aa21.02■□□□□ 0.95
CHPF2-204ENST00000495645 KIF3BO15066 747 aa21■□□□□ 0.95
CHPF2-204ENST00000495645 FAM135AQ9P2D6 1515 aa21■□□□□ 0.95
CHPF2-204ENST00000495645 C11orf95C9JLR9 678 aaPredicted RBP20.99■□□□□ 0.95
CHPF2-204ENST00000495645 ABCA9Q8IUA7 1624 aa20.99■□□□□ 0.95
CHPF2-204ENST00000495645 DCAF11Q8TEB1 546 aa20.98■□□□□ 0.95
CHPF2-204ENST00000495645 KIF13AQ9H1H9 1805 aa20.95■□□□□ 0.94
CHPF2-204ENST00000495645 GLI2P10070 1586 aa20.95■□□□□ 0.94
CHPF2-204ENST00000495645 PLA2R1Q13018 1463 aa20.94■□□□□ 0.94
CHPF2-204ENST00000495645 FAM69CQ0P6D2 419 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms