RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 FANCIQ9NVI1 1328 aa16.44■□□□□ 0.22
TRIM2-209ENST00000494872 EIF4G2P78344 907 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRIM2-209ENST00000494872 GRIN2AQ12879 1464 aa16.44■□□□□ 0.22
TRIM2-209ENST00000494872 CNTLNQ9NXG0 1405 aa16.44■□□□□ 0.22
TRIM2-209ENST00000494872 CDK11AQ9UQ88 783 aaPredicted RBP16.43■□□□□ 0.22
TRIM2-209ENST00000494872 DAPK1P53355 1430 aa16.43■□□□□ 0.22
TRIM2-209ENST00000494872 NUP153P49790 1475 aaKnown RBP16.43■□□□□ 0.22
TRIM2-209ENST00000494872 RAPGEF6Q8TEU7 1601 aa16.42■□□□□ 0.22
TRIM2-209ENST00000494872 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
TRIM2-209ENST00000494872 DNMT1P26358 1616 aaKnown RBP16.4■□□□□ 0.22
TRIM2-209ENST00000494872 ABCC5O15440 1437 aa16.4■□□□□ 0.22
TRIM2-209ENST00000494872 NCOA1Q15788 1441 aa16.39■□□□□ 0.21
TRIM2-209ENST00000494872 MAGI1Q96QZ7 1491 aaPredicted RBP16.38■□□□□ 0.21
TRIM2-209ENST00000494872 PPP4R2Q9NY27 417 aa16.37■□□□□ 0.21
TRIM2-209ENST00000494872 CCDC7Q96M83 1385 aa16.36■□□□□ 0.21
TRIM2-209ENST00000494872 MSH5O43196 834 aa16.35■□□□□ 0.21
TRIM2-209ENST00000494872 TROQ12816 1431 aaPredicted RBP16.35■□□□□ 0.21
TRIM2-209ENST00000494872 L3MBTL2Q969R5 705 aa16.34■□□□□ 0.21
TRIM2-209ENST00000494872 ANKRD30BQ9BXX2 1392 aa16.34■□□□□ 0.21
TRIM2-209ENST00000494872 ZNF644Q9H582 1327 aaPredicted RBP16.34■□□□□ 0.21
TRIM2-209ENST00000494872 CHMP7Q8WUX9 453 aaPredicted RBP16.34■□□□□ 0.21
TRIM2-209ENST00000494872 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
TRIM2-209ENST00000494872 PRKRIP1Q9H875 184 aaPredicted RBP16.34■□□□□ 0.21
TRIM2-209ENST00000494872 SYNJ2O15056 1496 aa16.33■□□□□ 0.2
TRIM2-209ENST00000494872 ZBED9Q6R2W3 1325 aa16.33■□□□□ 0.2
TRIM2-209ENST00000494872 ERCC6Q03468 1493 aa16.33■□□□□ 0.2
TRIM2-209ENST00000494872 SLC24A1O60721 1099 aa16.33■□□□□ 0.2
TRIM2-209ENST00000494872 RPRD2Q5VT52 1461 aaKnown RBP16.32■□□□□ 0.2
TRIM2-209ENST00000494872 POLR1AO95602 1720 aaPredicted RBP16.32■□□□□ 0.2
TRIM2-209ENST00000494872 CEP170Q5SW79 1584 aa16.31■□□□□ 0.2
TRIM2-209ENST00000494872 PRG4Q92954 1404 aaPredicted RBP16.31■□□□□ 0.2
TRIM2-209ENST00000494872 FOXD1Q16676 465 aa16.31■□□□□ 0.2
TRIM2-209ENST00000494872 IRX6P78412 446 aaPredicted RBP16.31■□□□□ 0.2
TRIM2-209ENST00000494872 ITSN2Q9NZM3 1697 aa16.3■□□□□ 0.2
TRIM2-209ENST00000494872 CARMIL2Q6F5E8 1435 aa16.3■□□□□ 0.2
TRIM2-209ENST00000494872 CAMSAP2Q08AD1 1489 aa16.29■□□□□ 0.2
TRIM2-209ENST00000494872 TEX14Q8IWB6 1497 aa16.29■□□□□ 0.2
TRIM2-209ENST00000494872 SLC4A1APQ9BWU0 796 aaKnown RBP16.29■□□□□ 0.2
TRIM2-209ENST00000494872 CFDP1Q9UEE9 299 aaPredicted RBP16.29■□□□□ 0.2
TRIM2-209ENST00000494872 ADCY10Q96PN6 1610 aa16.28■□□□□ 0.2
TRIM2-209ENST00000494872 PLB1Q6P1J6 1458 aa16.28■□□□□ 0.2
TRIM2-209ENST00000494872 CCDC184Q52MB2 194 aa16.28■□□□□ 0.2
TRIM2-209ENST00000494872 GPATCH8Q9UKJ3 1502 aaKnown RBP16.28■□□□□ 0.2
TRIM2-209ENST00000494872 SPATA31E1Q6ZUB1 1445 aa16.28■□□□□ 0.2
TRIM2-209ENST00000494872 C11orf95C9JLR9 678 aaPredicted RBP16.27■□□□□ 0.19
TRIM2-209ENST00000494872 MRS2Q9HD23 443 aa16.27■□□□□ 0.19
TRIM2-209ENST00000494872 NUP160Q12769 1436 aa16.26■□□□□ 0.19
TRIM2-209ENST00000494872 ERICH6Q7L0X2 663 aa16.26■□□□□ 0.19
TRIM2-209ENST00000494872 JPH4Q96JJ6 628 aa16.26■□□□□ 0.19
TRIM2-209ENST00000494872 ADGBQ8N7X0 1667 aa16.25■□□□□ 0.19
TRIM2-209ENST00000494872 ADGRL2O95490 1459 aa16.25■□□□□ 0.19
TRIM2-209ENST00000494872 FBLN2P98095 1184 aa16.24■□□□□ 0.19
TRIM2-209ENST00000494872 NBPF8Q3BBV2 869 aa16.24■□□□□ 0.19
TRIM2-209ENST00000494872 FAM9BQ8IZU0 186 aa16.24■□□□□ 0.19
TRIM2-209ENST00000494872 PZPP20742 1482 aa16.24■□□□□ 0.19
TRIM2-209ENST00000494872 MYT1LQ9UL68 1186 aa16.23■□□□□ 0.19
TRIM2-209ENST00000494872 KIF7Q2M1P5 1343 aa16.23■□□□□ 0.19
TRIM2-209ENST00000494872 KIF14Q15058 1648 aa16.23■□□□□ 0.19
TRIM2-209ENST00000494872 CROCC2H7BZ55 1655 aa16.21■□□□□ 0.19
TRIM2-209ENST00000494872 ANKRD30AQ9BXX3 1397 aa16.21■□□□□ 0.18
TRIM2-209ENST00000494872 ZNF777Q9ULD5 760 aaPredicted RBP16.21■□□□□ 0.18
TRIM2-209ENST00000494872 PLEKHD1A6NEE1 506 aa16.19■□□□□ 0.18
TRIM2-209ENST00000494872 KIAA1107Q9UPP5 1409 aa16.19■□□□□ 0.18
TRIM2-209ENST00000494872 ABCA8O94911 1581 aa16.19■□□□□ 0.18
TRIM2-209ENST00000494872 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
TRIM2-209ENST00000494872 ARID4BQ4LE39 1312 aaPredicted RBP16.16■□□□□ 0.18
TRIM2-209ENST00000494872 B4GALNT3Q6L9W6 998 aa16.16■□□□□ 0.18
TRIM2-209ENST00000494872 MBD5Q9P267 1494 aa16.16■□□□□ 0.18
TRIM2-209ENST00000494872 ATP10BO94823 1461 aa16.15■□□□□ 0.18
TRIM2-209ENST00000494872 ABCC10Q5T3U5 1492 aa16.15■□□□□ 0.18
TRIM2-209ENST00000494872 SHANK2Q9UPX8 1470 aa16.14■□□□□ 0.17
TRIM2-209ENST00000494872 DHX29Q7Z478 1369 aaKnown RBP16.14■□□□□ 0.17
TRIM2-209ENST00000494872 ANKRD50Q9ULJ7 1429 aa16.14■□□□□ 0.17
TRIM2-209ENST00000494872 PKD2Q13563 968 aa16.14■□□□□ 0.17
TRIM2-209ENST00000494872 DNAJC5Q9H3Z4 198 aa16.14■□□□□ 0.17
TRIM2-209ENST00000494872 RNF123Q5XPI4 1314 aa16.13■□□□□ 0.17
TRIM2-209ENST00000494872 CDC42BPAQ5VT25 1732 aa16.13■□□□□ 0.17
TRIM2-209ENST00000494872 NUDCQ9Y266 331 aa16.11■□□□□ 0.17
TRIM2-209ENST00000494872 C9orf84Q5VXU9 1444 aa16.11■□□□□ 0.17
TRIM2-209ENST00000494872 TSPY4P0CV99 314 aa16.09■□□□□ 0.17
TRIM2-209ENST00000494872 TSPY10P0CW01 314 aa16.09■□□□□ 0.17
TRIM2-209ENST00000494872 ROCK2O75116 1388 aaKnown RBP16.09■□□□□ 0.17
TRIM2-209ENST00000494872 USP47Q96K76 1375 aa16.09■□□□□ 0.17
TRIM2-209ENST00000494872 NUP155O75694 1391 aa16.08■□□□□ 0.16
TRIM2-209ENST00000494872 KDM5CP41229 1560 aa16.07■□□□□ 0.16
TRIM2-209ENST00000494872 BCORL1Q5H9F3 1711 aa16.07■□□□□ 0.16
TRIM2-209ENST00000494872 KDM5DQ9BY66 1539 aa16.07■□□□□ 0.16
TRIM2-209ENST00000494872 ARHGEF5Q12774 1597 aa16.06■□□□□ 0.16
TRIM2-209ENST00000494872 UHRF1BP1Q6BDS2 1440 aa16.06■□□□□ 0.16
TRIM2-209ENST00000494872 PTPRGP23470 1445 aa16.06■□□□□ 0.16
TRIM2-209ENST00000494872 NOP58Q9Y2X3 529 aaKnown RBP16.04■□□□□ 0.16
TRIM2-209ENST00000494872 ARHGEF12Q9NZN5 1544 aa16.03■□□□□ 0.16
TRIM2-209ENST00000494872 RALGAPBQ86X10 1494 aa16.03■□□□□ 0.16
TRIM2-209ENST00000494872 HNRNPMP52272 730 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRIM2-209ENST00000494872 ZNF326Q5BKZ1 582 aaKnown RBP16.03■□□□□ 0.16
TRIM2-209ENST00000494872 KTN1Q86UP2 1357 aaKnown RBP16.03■□□□□ 0.16
TRIM2-209ENST00000494872 KIF15Q9NS87 1388 aa16.03■□□□□ 0.16
TRIM2-209ENST00000494872 RSPH4AQ5TD94 716 aa16.02■□□□□ 0.16
TRIM2-209ENST00000494872 CCDC136Q96JN2 1154 aa16.02■□□□□ 0.16
TRIM2-209ENST00000494872 PNISRQ8TF01 805 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms