RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-209ENST00000494411 CDC42BPAQ5VT25 1732 aa30.44■■■□□ 2.46
PCMT1-209ENST00000494411 EFCAB2Q5VUJ9 269 aa30.43■■■□□ 2.46
PCMT1-209ENST00000494411 MTUS2Q5JR59 1369 aa30.41■■■□□ 2.46
PCMT1-209ENST00000494411 SCAPERQ9BY12 1400 aa30.39■■■□□ 2.46
PCMT1-209ENST00000494411 EHBP1L1Q8N3D4 1523 aa30.39■■■□□ 2.46
PCMT1-209ENST00000494411 KDM4FA0A1W2PPD8 638 aa30.38■■■□□ 2.45
PCMT1-209ENST00000494411 ZMYM4Q5VZL5 1548 aa30.37■■■□□ 2.45
PCMT1-209ENST00000494411 POGZQ7Z3K3 1410 aa30.36■■■□□ 2.45
PCMT1-209ENST00000494411 TIAM1Q13009 1591 aa30.36■■■□□ 2.45
PCMT1-209ENST00000494411 ARHGEF40Q8TER5 1519 aa30.33■■■□□ 2.45
PCMT1-209ENST00000494411 GPATCH8Q9UKJ3 1502 aaKnown RBP30.32■■■□□ 2.44
PCMT1-209ENST00000494411 ABCC1P33527 1531 aa30.29■■■□□ 2.44
PCMT1-209ENST00000494411 ZFYVE16Q7Z3T8 1539 aa30.27■■■□□ 2.44
PCMT1-209ENST00000494411 CCNB3Q8WWL7 1395 aa30.27■■■□□ 2.44
PCMT1-209ENST00000494411 ITSN2Q9NZM3 1697 aa30.27■■■□□ 2.44
PCMT1-209ENST00000494411 ZNF518AQ6AHZ1 1483 aa30.25■■■□□ 2.43
PCMT1-209ENST00000494411 MAGI2Q86UL8 1455 aa30.25■■■□□ 2.43
PCMT1-209ENST00000494411 SUPT6HQ7KZ85 1726 aaKnown RBP30.25■■■□□ 2.43
PCMT1-209ENST00000494411 SAMD9LQ8IVG5 1584 aa30.24■■■□□ 2.43
PCMT1-209ENST00000494411 YEATS2Q9ULM3 1422 aa30.23■■■□□ 2.43
PCMT1-209ENST00000494411 ARHGEF12Q9NZN5 1544 aa30.23■■■□□ 2.43
PCMT1-209ENST00000494411 KDM5CP41229 1560 aa30.23■■■□□ 2.43
PCMT1-209ENST00000494411 MAP3K1Q13233 1512 aa30.21■■■□□ 2.43
PCMT1-209ENST00000494411 ZNF777Q9ULD5 760 aaPredicted RBP30.2■■■□□ 2.43
PCMT1-209ENST00000494411 NCOA2Q15596 1464 aa30.19■■■□□ 2.42
PCMT1-209ENST00000494411 LRRC9Q6ZRR7 1453 aa30.19■■■□□ 2.42
PCMT1-209ENST00000494411 AFAP1Q8N556 730 aa30.18■■■□□ 2.42
PCMT1-209ENST00000494411 CFDP1Q9UEE9 299 aaPredicted RBP30.18■■■□□ 2.42
PCMT1-209ENST00000494411 TRAPPC8Q9Y2L5 1435 aa30.17■■■□□ 2.42
PCMT1-209ENST00000494411 SYCP2Q9BX26 1530 aa30.17■■■□□ 2.42
PCMT1-209ENST00000494411 HECW2Q9P2P5 1572 aa30.16■■■□□ 2.42
PCMT1-209ENST00000494411 SIGLEC1Q9BZZ2 1709 aa30.15■■■□□ 2.42
PCMT1-209ENST00000494411 BCORL1Q5H9F3 1711 aa30.13■■■□□ 2.41
PCMT1-209ENST00000494411 ARID4BQ4LE39 1312 aaPredicted RBP30.12■■■□□ 2.41
PCMT1-209ENST00000494411 PLEKHH2Q8IVE3 1493 aa30.11■■■□□ 2.41
PCMT1-209ENST00000494411 KANK4Q5T7N3 995 aaPredicted RBP30.1■■■□□ 2.41
PCMT1-209ENST00000494411 ADAMTSL3P82987 1691 aa30.1■■■□□ 2.41
PCMT1-209ENST00000494411 MLH3Q9UHC1 1453 aa30.09■■■□□ 2.41
PCMT1-209ENST00000494411 ATP10AO60312 1499 aa30.08■■■□□ 2.41
PCMT1-209ENST00000494411 KIAA1107Q9UPP5 1409 aa30.08■■■□□ 2.41
PCMT1-209ENST00000494411 ABCA6Q8N139 1617 aa30.07■■■□□ 2.4
PCMT1-209ENST00000494411 DIP2CQ9Y2E4 1556 aa30.07■■■□□ 2.4
PCMT1-209ENST00000494411 C9orf84Q5VXU9 1444 aa30.06■■■□□ 2.4
PCMT1-209ENST00000494411 HNRNPMP52272 730 aaKnown RBP eCLIP30.06■■■□□ 2.4
PCMT1-209ENST00000494411 MYT1LQ9UL68 1186 aa30.06■■■□□ 2.4
PCMT1-209ENST00000494411 KIDINS220Q9ULH0 1771 aa30.05■■■□□ 2.4
PCMT1-209ENST00000494411 ZNF644Q9H582 1327 aaPredicted RBP30.05■■■□□ 2.4
PCMT1-209ENST00000494411 APLP2Q06481 763 aa30.04■■■□□ 2.4
PCMT1-209ENST00000494411 MADDQ8WXG6 1647 aa30.03■■■□□ 2.4
PCMT1-209ENST00000494411 CAMSAP2Q08AD1 1489 aa29.99■■■□□ 2.39
PCMT1-209ENST00000494411 REREQ9P2R6 1566 aa29.98■■■□□ 2.39
PCMT1-209ENST00000494411 MBD5Q9P267 1494 aa29.97■■■□□ 2.39
PCMT1-209ENST00000494411 INO80Q9ULG1 1556 aaPredicted RBP29.97■■■□□ 2.39
PCMT1-209ENST00000494411 SPAG9O60271 1321 aaKnown RBP29.96■■■□□ 2.39
PCMT1-209ENST00000494411 ATP7AQ04656 1500 aa29.96■■■□□ 2.39
PCMT1-209ENST00000494411 RIMS1Q86UR5 1692 aaKnown RBP29.94■■■□□ 2.38
PCMT1-209ENST00000494411 PTPRMP28827 1452 aa29.93■■■□□ 2.38
PCMT1-209ENST00000494411 MLECQ14165 292 aa29.92■■■□□ 2.38
PCMT1-209ENST00000494411 MYOM3Q5VTT5 1437 aa29.92■■■□□ 2.38
PCMT1-209ENST00000494411 FER1L4A9Z1Z3 1794 aa29.91■■■□□ 2.38
PCMT1-209ENST00000494411 CCDC141Q6ZP82 1450 aa29.88■■■□□ 2.37
PCMT1-209ENST00000494411 AGLP35573 1532 aa29.86■■■□□ 2.37
PCMT1-209ENST00000494411 MIA2Q96PC5 1412 aa29.86■■■□□ 2.37
PCMT1-209ENST00000494411 ARHGEF5Q12774 1597 aa29.86■■■□□ 2.37
PCMT1-209ENST00000494411 ADGBQ8N7X0 1667 aa29.82■■■□□ 2.36
PCMT1-209ENST00000494411 ILDR1Q86SU0 546 aaPredicted RBP29.81■■■□□ 2.36
PCMT1-209ENST00000494411 PLXNC1O60486 1568 aa29.81■■■□□ 2.36
PCMT1-209ENST00000494411 RTEL1-TNFRSF6BF6WH68 1400 aa29.79■■■□□ 2.36
PCMT1-209ENST00000494411 A2MP01023 1474 aa29.79■■■□□ 2.36
PCMT1-209ENST00000494411 RSPH4AQ5TD94 716 aa29.77■■■□□ 2.36
PCMT1-209ENST00000494411 PTPN23Q9H3S7 1636 aa29.77■■■□□ 2.36
PCMT1-209ENST00000494411 FGD6Q6ZV73 1430 aa29.73■■■□□ 2.35
PCMT1-209ENST00000494411 PLPPR3Q6T4P5 718 aa29.71■■■□□ 2.35
PCMT1-209ENST00000494411 MAST1Q9Y2H9 1570 aa29.7■■■□□ 2.35
PCMT1-209ENST00000494411 TSPY4P0CV99 314 aa29.68■■■□□ 2.34
PCMT1-209ENST00000494411 TSPY10P0CW01 314 aa29.68■■■□□ 2.34
PCMT1-209ENST00000494411 TCOF1Q13428 1488 aaKnown RBP29.68■■■□□ 2.34
PCMT1-209ENST00000494411 CROCC2H7BZ55 1655 aa29.66■■■□□ 2.34
PCMT1-209ENST00000494411 DHX29Q7Z478 1369 aaKnown RBP29.64■■■□□ 2.33
PCMT1-209ENST00000494411 DNMT1P26358 1616 aaKnown RBP29.62■■■□□ 2.33
PCMT1-209ENST00000494411 C3P01024 1663 aa29.62■■■□□ 2.33
PCMT1-209ENST00000494411 ESF1Q9H501 851 aaKnown RBP29.61■■■□□ 2.33
PCMT1-209ENST00000494411 ABCC5O15440 1437 aa29.61■■■□□ 2.33
PCMT1-209ENST00000494411 CEBPAP49715 358 aaPredicted RBP29.59■■■□□ 2.33
PCMT1-209ENST00000494411 CNTLNQ9NXG0 1405 aa29.59■■■□□ 2.33
PCMT1-209ENST00000494411 SHANK2Q9UPX8 1470 aa29.59■■■□□ 2.33
PCMT1-209ENST00000494411 MROH2AA6NES4 1674 aa29.58■■■□□ 2.33
PCMT1-209ENST00000494411 DAPK1P53355 1430 aa29.58■■■□□ 2.33
PCMT1-209ENST00000494411 CLTCQ00610 1675 aaKnown RBP29.58■■■□□ 2.33
PCMT1-209ENST00000494411 LMTK3Q96Q04 1460 aa29.56■■■□□ 2.32
PCMT1-209ENST00000494411 GGT6Q6P531 493 aa29.56■■■□□ 2.32
PCMT1-209ENST00000494411 PPARGC1BQ86YN6 1023 aaKnown RBP29.54■■■□□ 2.32
PCMT1-209ENST00000494411 KIF3BO15066 747 aa29.52■■■□□ 2.32
PCMT1-209ENST00000494411 PREX1Q8TCU6 1659 aa29.52■■■□□ 2.32
PCMT1-209ENST00000494411 FAM50AQ14320 339 aaKnown RBP29.5■■■□□ 2.31
PCMT1-209ENST00000494411 EIF2AK4Q9P2K8 1649 aaKnown RBP29.49■■■□□ 2.31
PCMT1-209ENST00000494411 DUOX2Q9NRD8 1548 aa29.48■■■□□ 2.31
PCMT1-209ENST00000494411 SETD1BQ9UPS6 1966 aaKnown RBP29.47■■■□□ 2.31
PCMT1-209ENST00000494411 RNF17Q9BXT8 1623 aaKnown RBP29.46■■■□□ 2.31
PCMT1-209ENST00000494411 PPP6R1Q9UPN7 881 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms